Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027605 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 2.5e-133 478.8 246 100.0
CSS0006882 Camellia sinensis var. sinensis HOM05D007287 ORTHO05D008965 7.6e-130 467.2 246 98.4
Dinv16928 Davidia involucrata HOM05D007287 ORTHO05D008965 1.0e-70 270.8 249 63.9
Rhsim04G0120200 Rhododendron simsii HOM05D007287 ORTHO05D008965 3.8e-65 252.3 256 59.4
vmacro08958 Vaccinium macrocarpon HOM05D007287 ORTHO05D008965 1.7e-60 236.9 254 57.1
Actinidia20808 Actinidia chinensis HOM05D007287 ORTHO05D008965 1.1e-59 234.2 223 64.1
Oeu039292.1 Olea europaea HOM05D007287 ORTHO05D008965 2.2e-44 183.3 213 48.4
Thecc.04G001200 Theobroma cacao HOM05D007287 ORTHO05D008965 1.1e-43 181.0 198 54.0
Haze_21214 Corylus avellana HOM05D007287 ORTHO05D008965 1.9e-43 180.3 208 53.8
Lsat_1_v5_gn_5_153761 Lactuca sativa HOM05D007287 ORTHO05D008965 4.1e-43 179.1 248 46.8
Cfa016991 Carpinus fangiana HOM05D007287 ORTHO05D008965 4.6e-42 175.6 208 53.4
Manes.09G120600 Manihot esculenta HOM05D007287 ORTHO05D008965 8.6e-41 171.4 204 52.0
GSVIVG01029850001 Vitis vinifera HOM05D007287 ORTHO05D008965 2.5e-40 169.9 202 49.5
Ciclev10012636m.g Citrus clementina HOM05D007287 ORTHO05D008965 3.3e-40 169.5 252 46.8
Nn5g26760 Nelumbo nucifera HOM05D007287 ORTHO05D008965 3.3e-40 169.5 201 52.7
Manes.08G167300 Manihot esculenta HOM05D007287 ORTHO05D008965 1.6e-39 167.2 253 44.3
Nitab4.5_0002785g0030 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.1e-38 164.5 192 47.4
ECA248G0550 Erigeron canadensis HOM05D007287 ORTHO05D008965 6.8e-38 161.8 249 42.2
Peaxi162Scf00732g00008 Petunia axillaris HOM05D007287 ORTHO05D008965 2.0e-37 160.2 251 42.6
TAR633G2304 Trochodendron aralioides HOM05D007287 ORTHO05D008965 1.7e-36 157.1 258 41.9
Gohir.D02G000600 Gossypium hirsutum HOM05D007287 ORTHO05D008965 3.8e-36 156.0 221 45.7
Gorai.005G001000 Gossypium raimondii HOM05D007287 ORTHO05D008965 3.8e-36 156.0 221 45.7
QL07p031465 Quercus lobata HOM05D007287 ORTHO05D008965 3.8e-36 156.0 248 42.3
QL07p030582 Quercus lobata HOM05D007287 ORTHO05D008965 4.9e-36 155.6 248 42.3
Potri.016G142100 Populus trichocarpa HOM05D007287 ORTHO05D008965 6.4e-36 155.2 197 48.2
Sc20g0007340 Simmondsia chinensis HOM05D007287 ORTHO05D008965 6.4e-36 155.2 198 49.5
Sc20g0007530 Simmondsia chinensis HOM05D007287 ORTHO05D008965 6.4e-36 155.2 198 49.5
Nitab4.5_0000356g0060 Nicotiana tabacum HOM05D007287 ORTHO05D008965 1.1e-35 154.5 195 44.1
Gohir.A02G000300 Gossypium hirsutum HOM05D007287 ORTHO05D008965 7.1e-35 151.8 221 44.3
Sabra04G0158300 Salix brachista HOM05D007287 ORTHO05D008965 7.1e-35 151.8 197 47.2
MSTRG.26833 Avicennia marina HOM05D007287 ORTHO05D008965 9.2e-35 151.4 223 43.0
Cpa.g.sc60.59 Carica papaya HOM05D007287 ORTHO05D008965 2.1e-34 150.2 194 49.0
Duzib268G0768 Durio zibethinus HOM05D007287 ORTHO05D008965 1.7e-33 147.1 208 43.8
Prupe.6G299000 Prunus persica HOM05D007287 ORTHO05D008965 3.0e-33 146.4 249 43.0
Glyma.16G221800 Glycine max HOM05D007287 ORTHO05D008965 3.9e-33 146.0 200 48.0
Glyma.03G000900 Glycine max HOM05D007287 ORTHO05D008965 5.1e-33 145.6 195 48.7
PGSC0003DMG400020867 Solanum tuberosum HOM05D007287 ORTHO05D008965 1.5e-32 144.1 194 42.8
Potri.006G112600 Populus trichocarpa HOM05D007287 ORTHO05D008965 1.9e-32 143.7 198 47.5
Sabra06G0087700 Salix brachista HOM05D007287 ORTHO05D008965 1.9e-32 143.7 193 46.6
HanXRQChr11g0345021 Helianthus annuus HOM05D007287 ORTHO05D008965 3.3e-32 142.9 224 46.0
EL10Ac6g15481 Beta vulgaris HOM05D007287 ORTHO05D008965 7.3e-32 141.7 226 45.6
AUR62029815 Chenopodium quinoa HOM05D007287 ORTHO05D008965 7.3e-32 141.7 211 44.5
Atru.chr8.50 Acer truncatum HOM05D007287 ORTHO05D008965 2.1e-31 140.2 208 46.6
TWI74G0480 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 8.1e-31 138.3 194 46.9
DCAR_014750 Daucus carota HOM05D007287 ORTHO05D008965 1.1e-30 137.9 212 46.2
RcHm_v2.0_Chr3g0459671 Rosa chinensis HOM05D007287 ORTHO05D008965 8.9e-30 134.8 195 46.2
Phvul.010G060000 Phaseolus vulgaris HOM05D007287 ORTHO05D008965 2.0e-29 133.7 219 43.4
AUR62006459 Chenopodium quinoa HOM05D007287 ORTHO05D008965 9.9e-29 131.3 211 43.6
FvH4_6g09290 Fragaria vesca HOM05D007287 ORTHO05D008965 1.3e-28 131.0 203 43.8
FAN09G3442 Fragaria x ananassa HOM05D007287 ORTHO05D008965 1.3e-28 131.0 203 44.3
CsaV3_4G027460 Cucumis sativus L. HOM05D007287 ORTHO05D008965 2.2e-28 130.2 200 46.0
ClCG04G006100 Citrullus lanatus HOM05D007287 ORTHO05D008965 2.9e-28 129.8 202 46.5
MD04G1179200 Malus domestica HOM05D007287 ORTHO05D008965 1.1e-27 127.9 227 41.9
Lj3g0024711 Lotus japonicus HOM05D007287 ORTHO05D008965 1.4e-27 127.5 229 42.8
Actinidia32578 Actinidia chinensis HOM05D007287 ORTHO05D008965 2.4e-27 126.7 134 57.5
PSO384G1025 Papaver somniferum HOM05D007287 ORTHO05D008965 2.4e-27 126.7 260 37.3
Sopen09g026010 Solanum pennellii HOM05D007287 ORTHO05D008965 2.4e-27 126.7 214 39.7
MBI15_g22001_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 7.1e-27 125.2 247 39.3
PSO339G4161 Papaver somniferum HOM05D007287 ORTHO05D008965 7.1e-27 125.2 269 37.2
Solyc09g031900.4 Solanum lycopersicum HOM05D007287 ORTHO05D008965 2.7e-26 123.2 214 38.8
PGR031G1010 Punica granatum HOM05D007287 ORTHO05D008965 1.0e-25 121.3 216 43.1
VMungo0331G1821 Vigna mungo HOM05D007287 ORTHO05D008965 1.7e-25 120.6 221 39.4
CAN.G616.24 Capsicum annuum HOM05D007287 ORTHO05D008965 2.3e-25 120.2 252 36.1
MBI15_g05588_MAGBIO Magnolia biondii HOM05D007287 ORTHO05D008965 2.3e-25 120.2 221 40.7
Cc06_g00120 Coffea canephora HOM05D007287 ORTHO05D008965 1.5e-24 117.5 198 42.4
Eucgr.K01309 Eucalyptus grandis HOM05D007287 ORTHO05D008965 1.5e-24 117.5 200 39.5
Ah.02g119260 Amaranthus hybridus HOM05D007287 ORTHO05D008965 3.3e-24 116.3 230 38.3
TWI77G0104 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 5.6e-24 115.5 226 39.4
Sed0017124 Sechium edule HOM05D007287 ORTHO05D008965 7.3e-24 115.2 144 47.9
Aqoxy2G01629 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.3e-23 114.4 184 38.6
MELO3C025269.2 Cucumis melo HOM05D007287 ORTHO05D008965 9.0e-22 108.2 134 50.7
Gohir.A05G415801 Gossypium hirsutum HOM05D007287 ORTHO05D008965 9.0e-22 108.2 218 39.4
DCAR_023246 Daucus carota HOM05D007287 ORTHO05D008965 1.3e-20 104.4 148 45.3
CANSAT01G2619 Cannabis sativa HOM05D007287 ORTHO05D008965 3.8e-20 102.8 233 36.1
FAN02G3892 Fragaria x ananassa HOM05D001484 ORTHO05D008965 1.1e-19 101.3 198 37.9
CDE07G0622 Ceratophyllum demersum HOM05D007287 ORTHO05D008965 5.4e-19 99.0 148 38.5
TWI53G0571 Tripterygium wilfordii HOM05D007287 ORTHO05D008965 7.1e-19 98.6 138 47.1
VMungo1127G2237 Vigna mungo HOM05D007287 ORTHO05D008965 7.1e-19 98.6 259 32.8
CDE06G1816 Ceratophyllum demersum HOM05D005836 ORTHO05D007335 6.0e-18 95.5 205 33.7
Aqoxy1G02348 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 1.0e-17 94.7 162 38.9
TPR.G30730 Trifolium pratense HOM05D007287 ORTHO05D008965 6.7e-17 92.0 207 36.7
HPP92_015439 Vanilla planifolia HOM05D007287 ORTHO05D008965 6.7e-17 92.0 144 37.5
arahy.Tifrunner.gnm1.ann1.K8RLSB Arachis hypogaea HOM05D007287 ORTHO05D008965 1.9e-16 90.5 199 38.2
Gohir.A05G415501 Gossypium hirsutum HOM05D007287 ORTHO05D008965 1.9e-16 90.5 218 35.3
Aqoxy1G03140 Aquilegia oxysepala HOM05D007287 ORTHO05D008965 2.5e-16 90.1 161 37.9
SGA_v2.0_scaffold240G44057 Striga asiatica HOM05D007287 ORTHO05D008965 7.4e-16 88.6 148 41.2
arahy.Tifrunner.gnm1.ann1.HN5ZMV Arachis hypogaea HOM05D007287 ORTHO05D008965 3.6e-15 86.3 198 36.9
HanXRQChr10g0286721 Helianthus annuus HOM05D007287 ORTHO05D008965 5.3e-14 82.4 113 43.4
Os11g0119900 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 5.3e-14 82.4 164 32.9
HPP92_018079 Vanilla planifolia HOM05D007287 ORTHO05D008965 1.2e-13 81.3 178 34.8
DCAR_011429 Daucus carota HOM05D054201 ORTHO05D008965 2.0e-13 80.5 220 34.1
Medtr8g005070 Medicago truncatula HOM05D007287 ORTHO05D008965 2.0e-13 80.5 205 38.0
ATR1127G180 Amborella trichopoda HOM05D007287 ORTHO05D008965 1.7e-12 77.4 249 32.1
Eucgr.A00853 Eucalyptus grandis HOM05D007287 ORTHO05D008965 8.4e-12 75.1 156 32.7
VMungo0464G2164 Vigna mungo HOM05D007287 ORTHO05D008965 8.4e-12 75.1 190 34.2
Os12g0119700 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.4e-11 74.3 247 29.6
Os12g0119350 Oryza sativa ssp. japonica HOM05D007287 ORTHO05D008965 1.9e-11 73.9 174 31.6
DCAR_010225 Daucus carota HOM05D054201 ORTHO05D008965 2.4e-11 73.6 228 32.9
Zm00001eb078960 Zea mays HOM05D007287 ORTHO05D008965 2.4e-11 73.6 152 31.6
Ca_18907_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 2.7e-10 70.1 121 38.0
Gohir.A12G000800 Gossypium hirsutum HOM05D007287 ORTHO05D008965 7.9e-10 68.6 112 40.2
Lalb_Chr13g0290321 Lupinus albus HOM05D007287 ORTHO05D008965 1.8e-09 67.4 233 30.0
COL.COLO4_12535 Corchorus olitorius HOM05D007287 ORTHO05D008965 1.1e-08 64.7 134 35.8
ECA247G1060 Erigeron canadensis HOM05D051946 ORTHO05D008965 2.5e-08 63.5 142 38.7
THA.LOC104806658 Tarenaya hassleriana HOM05D009615 ORTHO05D011760 2.5e-08 63.5 127 38.6
Ca_18906_v3 Cicer arietinum L. HOM05D007287 ORTHO05D008965 1.8e-06 57.4 188 32.4
Medtr4g079340 Medicago truncatula HOM05D007287 ORTHO05D008965 5.3e-06 55.8 50 54.0
Psat2g191120 Pisum sativum HOM05D007287 ORTHO05D008965 9.0e-06 55.1 192 31.2


User provided reference genes

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