Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027561 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 2.9e-129 465.3 246 100.0
CSS0037366 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 6.9e-123 444.1 246 96.3
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 1.4e-54 217.2 252 54.8
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 1.9e-48 196.8 247 54.7
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 2.5e-48 196.4 244 56.1
Actinidia11116 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.4e-30 137.5 244 44.3
Dinv06849 Davidia involucrata HOM05D006668 ORTHO05D008252 1.3e-25 120.9 249 39.8
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 6.4e-20 102.1 247 36.8
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 1.1e-16 91.3 222 33.3
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 1.9e-16 90.5 244 34.4
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.6e-15 86.3 143 42.7
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 4.0e-14 82.8 178 37.6
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.6e-13 80.1 266 32.0
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.6e-13 80.1 251 34.7
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 7.6e-13 78.6 238 31.5
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 1.6e-10 70.9 177 34.5
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.6e-10 70.9 182 35.2
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.7e-10 70.1 209 31.6
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 3.5e-10 69.7 208 34.6
Haze_13262 Corylus avellana HOM05D006668 ORTHO05D008252 4.6e-10 69.3 194 33.5
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 7.9e-10 68.6 210 33.3
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 1.3e-09 67.8 231 32.5
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 3.9e-09 66.2 241 29.9
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 3.9e-09 66.2 78 52.6
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 5.1e-09 65.9 286 30.4
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 1.1e-08 64.7 199 32.7
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 3.3e-08 63.2 250 30.8
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 4.3e-08 62.8 184 35.9
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 1.6e-07 60.8 247 31.6
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 2.1e-07 60.5 154 36.4
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 4.8e-07 59.3 181 31.5
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 8.1e-07 58.5 236 30.9
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 8.1e-07 58.5 236 29.7
Sc12g0003270 Simmondsia chinensis HOM05D006668 ORTHO05D008252 1.1e-06 58.2 184 33.2
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 1.4e-06 57.8 80 43.8
RcHm_v2.0_Chr7g0225321 Rosa chinensis HOM05D006668 ORTHO05D008252 1.4e-06 57.8 115 40.9
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 1.8e-06 57.4 208 30.3
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.8e-06 57.4 175 32.6
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 2.4e-06 57.0 235 31.9
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.4e-06 57.0 234 29.9
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 2.4e-06 57.0 234 29.9
Sabra17G0013400 Salix brachista HOM05D006668 ORTHO05D008252 2.4e-06 57.0 234 30.8
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 3.1e-06 56.6 207 30.0
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 4.0e-06 56.2 183 30.1
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 6.9e-06 55.5 234 30.3
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 6.9e-06 55.5 85 41.2
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 9.0e-06 55.1 237 30.0


User provided reference genes

Program Settings