Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027545 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D043344 0.0e+00 1076.2 597 100.0
CSS0047510 Camellia sinensis var. sinensis HOM05D000344 ORTHO05D043344 7.0e-129 465.3 337 77.4
Actinidia04295 Actinidia chinensis HOM05D000344 ORTHO05D005296 2.7e-128 463.4 538 54.3
Rhsim01G0034200 Rhododendron simsii HOM05D000344 ORTHO05D005296 1.5e-118 431.0 535 51.2
Actinidia38328 Actinidia chinensis HOM05D000344 ORTHO05D005296 1.6e-104 384.4 537 49.2
TAR625G0471 Trochodendron aralioides HOM05D000344 ORTHO05D005296 2.0e-67 261.2 549 38.1
GSVIVG01014079001 Vitis vinifera HOM05D000344 ORTHO05D005296 1.4e-60 238.4 536 34.9
Lj9A682G44 Lonicera japonica HOM05D000344 ORTHO05D005296 1.0e-58 232.3 537 41.7
Cfa021217 Carpinus fangiana HOM05D000344 ORTHO05D005296 1.5e-54 218.4 543 33.9
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 2.0e-54 218.0 541 33.3
Hma1.2p1_0222F.1_g093490 Hydrangea macrophylla HOM05D000344 ORTHO05D005296 9.7e-54 215.7 544 33.3
QL02p093136 Quercus lobata HOM05D000344 ORTHO05D005296 1.4e-52 211.8 540 38.1
Prupe.7G262200 Prunus persica HOM05D000344 ORTHO05D005296 2.2e-45 188.0 533 32.3
Nn2g12347 Nelumbo nucifera HOM05D000344 ORTHO05D005296 4.8e-45 186.8 552 33.7
CiPaw.16G113400 Carya illinoinensis HOM05D000344 ORTHO05D005296 4.1e-44 183.7 542 31.5
Atru.chr7.119 Acer truncatum HOM05D000344 ORTHO05D005296 9.1e-44 182.6 532 36.5
Dinv41384 Davidia involucrata HOM05D000344 ORTHO05D005296 1.4e-41 175.3 199 52.3
Manes.06G036300 Manihot esculenta HOM05D000344 ORTHO05D005296 3.2e-41 174.1 535 30.1
RcHm_v2.0_Chr2g0085751 Rosa chinensis HOM05D000344 ORTHO05D005296 1.6e-40 171.8 538 30.9
FAN26G2818 Fragaria x ananassa HOM05D000344 ORTHO05D005296 1.8e-39 168.3 530 31.3
MD15G1152500 Malus domestica HOM05D000344 ORTHO05D005296 3.9e-39 167.2 597 30.2
MD02G1008300 Malus domestica HOM05D000344 ORTHO05D005296 3.3e-38 164.1 581 29.3
CANSAT11G2628 Cannabis sativa HOM05D000344 ORTHO05D005296 5.7e-38 163.3 525 31.8
Oeu027650.1 Olea europaea HOM05D000344 ORTHO05D005296 7.4e-38 162.9 577 31.0
FAN28G1751 Fragaria x ananassa HOM05D000344 ORTHO05D005296 9.7e-38 162.5 530 31.1
Ciclev10007375m.g Citrus clementina HOM05D000344 ORTHO05D005296 4.8e-37 160.2 534 30.1
FvH4_1g01010 Fragaria vesca HOM05D000344 ORTHO05D005296 6.3e-37 159.8 530 30.9
Thecc.09G031500 Theobroma cacao HOM05D000344 ORTHO05D005296 5.3e-36 156.8 541 29.6
TWI34G1136 Tripterygium wilfordii HOM05D000344 ORTHO05D005296 5.3e-36 156.8 564 31.4
Duzib150G1122 Durio zibethinus HOM05D000344 ORTHO05D005296 7.0e-36 156.4 525 29.3
MSTRG.10689 Avicennia marina HOM05D000344 ORTHO05D005296 1.2e-35 155.6 574 28.6
COL.COLO4_18799 Corchorus olitorius HOM05D000344 ORTHO05D005296 3.5e-35 154.1 530 30.8
Oeu052192.1 Olea europaea HOM05D000344 ORTHO05D005296 5.9e-35 153.3 539 33.0
Gohir.A08G251700 Gossypium hirsutum HOM05D000344 ORTHO05D005296 7.7e-35 152.9 538 31.0
Duzib168G1790 Durio zibethinus HOM05D000344 ORTHO05D005296 1.1e-33 149.1 536 28.5
Gorai.004G291700 Gossypium raimondii HOM05D000344 ORTHO05D005296 1.1e-33 149.1 534 29.6
Gohir.D08G273300 Gossypium hirsutum HOM05D000344 ORTHO05D005296 1.9e-33 148.3 534 29.6
Cc11_g03310 Coffea canephora HOM05D000344 ORTHO05D005296 7.2e-33 146.4 538 30.3
Eucgr.C00353 Eucalyptus grandis HOM05D000344 ORTHO05D005296 1.6e-32 145.2 554 29.1
Duzib187G1763 Durio zibethinus HOM05D000344 ORTHO05D005296 3.6e-32 144.1 566 28.6
Glyma.17G074200 Glycine max HOM05D000344 ORTHO05D005296 6.1e-32 143.3 530 28.7
Potri.018G107500 Populus trichocarpa HOM05D000344 ORTHO05D005296 6.1e-32 143.3 537 30.7
DCAR_014812 Daucus carota HOM05D000344 ORTHO05D004969 8.0e-32 142.9 543 28.7
Phvul.003G156400 Phaseolus vulgaris HOM05D000344 ORTHO05D005296 8.0e-32 142.9 534 29.0
Sabra18G0091500 Salix brachista HOM05D000344 ORTHO05D005296 1.8e-31 141.7 535 30.7
Potri.006G185200 Populus trichocarpa HOM05D000344 ORTHO05D005296 4.0e-31 140.6 531 30.3
SGA_v2.0_scaffold12G05989 Striga asiatica HOM05D000344 ORTHO05D005296 8.8e-31 139.4 542 27.1
Hma1.2p1_0028F.1_g017540 Hydrangea macrophylla HOM05D000344 ORTHO05D005296 1.2e-30 139.0 202 45.0
Sabra06G0140700 Salix brachista HOM05D000344 ORTHO05D005296 2.0e-30 138.3 553 28.2
Psat4g109520 Pisum sativum HOM05D000344 ORTHO05D005296 4.4e-30 137.1 540 27.6
Lalb_Chr13g0300881 Lupinus albus HOM05D000344 ORTHO05D005296 5.7e-30 136.7 516 27.5
Cc06_g15070 Coffea canephora HOM05D000344 ORTHO05D005296 2.8e-29 134.4 542 29.5
MELO3C004139.2 Cucumis melo HOM05D000344 ORTHO05D005296 3.7e-29 134.0 535 29.2
VMungo1215G2428 Vigna mungo HOM05D000344 ORTHO05D005296 6.3e-29 133.3 509 27.9
Nitab4.5_0009049g0030 Nicotiana tabacum HOM05D000344 ORTHO05D005296 4.1e-28 130.6 524 27.1
Ca_21122_v3 Cicer arietinum L. HOM05D000344 ORTHO05D005296 1.2e-27 129.0 538 26.8
CAN.G160.72 Capsicum annuum HOM05D000344 ORTHO05D005296 5.9e-27 126.7 540 27.4
Sed0023248 Sechium edule HOM05D000344 ORTHO05D005296 7.7e-27 126.3 540 27.2
CsaV3_2G007460 Cucumis sativus L. HOM05D000344 ORTHO05D005296 1.9e-25 121.7 533 26.1
Migut.K00330 Erythranthe guttata HOM05D000344 ORTHO05D005296 1.9e-25 121.7 548 27.6
Nitab4.5_0006879g0010 Nicotiana tabacum HOM05D000344 ORTHO05D005296 2.5e-25 121.3 545 25.3
Lj4g0022650 Lotus japonicus HOM05D000344 ORTHO05D005296 5.5e-25 120.2 509 27.5
Lalb_Chr12g0198671 Lupinus albus HOM05D000344 ORTHO05D005296 5.5e-25 120.2 541 26.4
DCAR_019390 Daucus carota HOM05D000344 ORTHO05D005296 7.2e-25 119.8 531 29.8
PGSC0003DMG400011136 Solanum tuberosum HOM05D000344 ORTHO05D005296 1.6e-24 118.6 537 27.7
SalBow1G0321 Salvia bowleyana HOM05D000344 ORTHO05D005296 2.7e-24 117.9 527 27.7
Sopen07g001630 Solanum pennellii HOM05D000344 ORTHO05D005296 2.7e-24 117.9 537 27.7
Solyc07g005530.4 Solanum lycopersicum HOM05D000344 ORTHO05D005296 3.6e-24 117.5 540 27.0
SalBow5G5380 Salvia bowleyana HOM05D000344 ORTHO05D005296 1.4e-23 115.5 529 26.8
ClCG02G014550 Citrullus lanatus HOM05D000344 ORTHO05D005296 1.8e-23 115.2 537 26.1
Gohir.A05G052400 Gossypium hirsutum HOM05D000344 ORTHO05D005296 2.3e-23 114.8 545 27.7
Aqoxy1G03315 Aquilegia oxysepala HOM05D000344 ORTHO05D005296 5.2e-23 113.6 540 29.1
Peaxi162Scf00252g00019 Petunia axillaris HOM05D000344 ORTHO05D005296 2.0e-22 111.7 532 26.1
Sed0018237 Sechium edule HOM05D000344 ORTHO05D005296 3.4e-22 110.9 537 27.2
FAN23G2562 Fragaria x ananassa HOM05D000344 ORTHO05D005296 4.4e-22 110.5 278 33.1
TAR636G0133 Trochodendron aralioides HOM05D000344 ORTHO05D005296 7.5e-22 109.8 193 43.5
Sc17g0006710 Simmondsia chinensis HOM05D000344 ORTHO05D005296 9.8e-22 109.4 508 26.6
Lj4g0019888 Lotus japonicus HOM05D000344 ORTHO05D005296 2.2e-21 108.2 503 25.8
PGR142G4209 Punica granatum HOM05D000344 ORTHO05D005296 4.8e-21 107.1 530 28.3
Medtr4g130940 Medicago truncatula HOM05D000344 ORTHO05D005296 8.3e-21 106.3 521 25.9
Hma1.2p1_0028F.1_g017530 Hydrangea macrophylla HOM05D000344 ORTHO05D005296 1.1e-20 105.9 173 41.0
TPR.G24857 Trifolium pratense HOM05D000344 ORTHO05D005296 7.0e-20 103.2 562 25.6
Gorai.009G055700 Gossypium raimondii HOM05D000344 ORTHO05D005296 2.0e-19 101.7 553 27.7
GSVIVG01001912001 Vitis vinifera HOM05D000344 ORTHO05D005296 2.7e-19 101.3 104 52.9
Gohir.D05G053900 Gossypium hirsutum HOM05D000344 ORTHO05D005296 4.5e-19 100.5 530 27.5
THA.LOC104811836 Tarenaya hassleriana HOM05D000344 ORTHO05D005296 8.6e-18 96.3 541 26.2
CiPaw.15G176800 Carya illinoinensis HOM05D000344 ORTHO05D005296 2.1e-16 91.7 206 37.4
Hma1.2p1_0222F.1_g093480 Hydrangea macrophylla HOM05D000344 ORTHO05D005296 6.1e-16 90.1 77 59.7
THA.LOC104817823 Tarenaya hassleriana HOM05D000344 ORTHO05D005296 1.4e-15 89.0 535 25.8
arahy.Tifrunner.gnm1.ann1.704TPP Arachis hypogaea HOM05D000344 ORTHO05D005296 3.0e-15 87.8 502 25.1
arahy.Tifrunner.gnm1.ann1.ALG29P Arachis hypogaea HOM05D000344 ORTHO05D005296 1.2e-14 85.9 508 24.4
Hund12031 Selenicereus undatus HOM05D000344 ORTHO05D005296 1.2e-14 85.9 498 23.9
AUR62034662 Chenopodium quinoa HOM05D000344 ORTHO05D005296 4.4e-14 84.0 518 24.9
PSO675G3655 Papaver somniferum HOM05D000344 ORTHO05D005296 5.7e-14 83.6 402 28.1
Cpa.g.sc46.148 Carica papaya HOM05D000344 ORTHO05D005296 2.0e-11 75.1 187 32.6
AUR62008577 Chenopodium quinoa HOM05D000344 ORTHO05D005296 1.0e-10 72.8 515 22.9
TAR636G1075 Trochodendron aralioides HOM05D000344 ORTHO05D005296 1.0e-10 72.8 50 66.0
unitig_8.g3634 Utricularia gibba HOM05D000344 ORTHO05D005296 3.9e-10 70.9 574 23.3
GSVIVG01001910001 Vitis vinifera HOM05D000344 ORTHO05D005296 5.0e-10 70.5 49 61.2
PSO732G0388 Papaver somniferum HOM05D000344 ORTHO05D005296 5.6e-09 67.0 399 26.3
Aqoxy7G03425 Aquilegia oxysepala HOM05D000344 ORTHO05D005296 7.3e-09 66.6 218 28.9
EL10Ac7g17422 Beta vulgaris HOM05D000344 ORTHO05D005296 2.1e-08 65.1 382 24.6
Glyma.02G203500 Glycine max HOM05D000344 ORTHO05D005296 2.1e-08 65.1 91 40.7
Aa31LG3G13780 Aethionema arabicum HOM05D000344 ORTHO05D005296 6.1e-08 63.5 517 23.6
C03p14670 Brassica napus HOM05D000344 ORTHO05D005296 3.1e-07 61.2 528 25.0
BolC3t13908H Brassica oleracea HOM05D000344 ORTHO05D005296 4.0e-07 60.8 521 24.2
ECA234G2365 Erigeron canadensis HOM05D000344 ORTHO05D004969 2.0e-06 58.5 226 28.8
TPR.G8014 Trifolium pratense HOM05D000344 ORTHO05D005296 5.8e-06 57.0 49 51.0


User provided reference genes

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