Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027543 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 1.0e-148 530.0 270 100.0
CSS0005502 Camellia sinensis var. sinensis HOM05D007136 ORTHO05D008986 8.9e-148 526.9 270 98.9
Rhsim09G0165500 Rhododendron simsii HOM05D007136 ORTHO05D008986 8.1e-109 397.5 268 75.7
Dinv26003 Davidia involucrata HOM05D007136 ORTHO05D008986 1.5e-107 393.3 268 76.5
vmacro10240 Vaccinium macrocarpon HOM05D007136 ORTHO05D008986 1.1e-105 387.1 266 74.4
Hma1.2p1_0683F.1_g202870 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 3.2e-105 385.6 266 73.7
Hma1.2p1_0683F.1_g202860 Hydrangea macrophylla HOM05D007136 ORTHO05D008986 1.0e-103 380.6 274 71.5
Actinidia29223 Actinidia chinensis HOM05D007136 ORTHO05D008986 2.5e-97 359.4 268 71.3
Cc02_g07990 Coffea canephora HOM05D007136 ORTHO05D008986 3.0e-95 352.4 266 66.9
GSVIVG01016535001 Vitis vinifera HOM05D007136 ORTHO05D008986 2.1e-93 346.3 267 66.3
DCAR_027635 Daucus carota HOM05D007136 ORTHO05D008986 6.9e-92 341.3 266 65.4
TAR633G2090 Trochodendron aralioides HOM05D000330 ORTHO05D008986 9.0e-92 340.9 268 64.6
Nn2g10391 Nelumbo nucifera HOM05D007136 ORTHO05D008986 2.2e-90 336.3 268 64.9
Thecc.10G044100 Theobroma cacao HOM05D007136 ORTHO05D008986 1.2e-88 330.5 268 63.1
Ciclev10032197m.g Citrus clementina HOM05D007136 ORTHO05D008986 7.9e-88 327.8 268 63.1
Nitab4.5_0000931g0010 Nicotiana tabacum HOM05D007136 ORTHO05D008986 3.9e-87 325.5 266 61.3
Cfa001492 Carpinus fangiana HOM05D007136 ORTHO05D008986 5.1e-87 325.1 268 62.3
Haze_17049 Corylus avellana HOM05D007136 ORTHO05D008986 1.9e-86 323.2 268 62.3
Sopen06g013560 Solanum pennellii HOM05D007136 ORTHO05D008986 4.3e-86 322.0 266 59.8
Migut.F01500 Erythranthe guttata HOM05D007136 ORTHO05D008986 7.4e-86 321.2 266 60.2
Atru.chr12.462 Acer truncatum HOM05D007136 ORTHO05D008986 2.4e-84 316.2 268 61.9
MSTRG.8246 Avicennia marina HOM05D007136 ORTHO05D008986 4.1e-84 315.5 266 60.9
Solyc06g043070.4 Solanum lycopersicum HOM05D007136 ORTHO05D008986 6.9e-84 314.7 264 58.7
Atru.chr12.484 Acer truncatum HOM05D007136 ORTHO05D008986 2.0e-83 313.2 268 61.2
Gohir.D10G226000 Gossypium hirsutum HOM05D007136 ORTHO05D008986 2.6e-83 312.8 268 58.6
Gohir.A10G217300 Gossypium hirsutum HOM05D007136 ORTHO05D008986 3.4e-83 312.4 268 59.0
Gorai.011G257200 Gossypium raimondii HOM05D007136 ORTHO05D008986 3.4e-83 312.4 268 58.6
TWI15G0021 Tripterygium wilfordii HOM05D007136 ORTHO05D008986 4.5e-83 312.0 266 60.2
CANSAT56G3368 Cannabis sativa HOM05D007136 ORTHO05D008986 5.9e-83 311.6 268 60.1
RcHm_v2.0_Chr1g0366511 Rosa chinensis HOM05D007136 ORTHO05D008986 5.9e-83 311.6 268 59.7
CiPaw.01G285300 Carya illinoinensis HOM05D007136 ORTHO05D008986 1.3e-82 310.5 266 59.8
Nitab4.5_0000065g0080 Nicotiana tabacum HOM05D007136 ORTHO05D008986 5.0e-82 308.5 266 60.2
Potri.010G205900 Populus trichocarpa HOM05D007136 ORTHO05D008986 7.2e-81 304.7 266 59.4
Prupe.2G233400 Prunus persica HOM05D007136 ORTHO05D008986 7.2e-81 304.7 268 58.2
SalBow6G2062 Salvia bowleyana HOM05D007136 ORTHO05D008986 9.4e-81 304.3 266 57.9
Peaxi162Scf00658g00728 Petunia axillaris HOM05D007136 ORTHO05D008986 1.2e-80 303.9 264 59.8
Lj4C909G7 Lonicera japonica HOM05D007136 ORTHO05D008986 2.7e-80 302.8 245 66.1
ECA238G4577 Erigeron canadensis HOM05D007136 ORTHO05D008986 1.0e-79 300.8 266 57.9
ATR0559G284 Amborella trichopoda HOM05D007136 ORTHO05D008986 8.8e-79 297.7 268 57.8
Glyma.18G289500 Glycine max HOM05D007136 ORTHO05D008986 1.1e-78 297.4 266 56.4
MD07G1196400 Malus domestica HOM05D007136 ORTHO05D008986 1.5e-78 297.0 268 55.2
FvH4_7g22120 Fragaria vesca HOM05D007136 ORTHO05D008986 2.0e-78 296.6 268 57.8
Cpa.g.sc1.397 Carica papaya HOM05D007136 ORTHO05D008986 4.3e-78 295.4 271 58.3
FAN01G1261 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.3e-78 295.4 268 57.5
SGA_v2.0_scaffold86G26943 Striga asiatica HOM05D007136 ORTHO05D008986 4.3e-78 295.4 266 57.9
FAN06G2040 Fragaria x ananassa HOM05D007136 ORTHO05D008986 5.7e-78 295.0 268 57.5
FAN01G1850 Fragaria x ananassa HOM05D007136 ORTHO05D008986 9.7e-78 294.3 268 57.5
Ca_07254_v3 Cicer arietinum L. HOM05D007136 ORTHO05D008986 3.7e-77 292.4 268 57.8
FAN06G2061 Fragaria x ananassa HOM05D007136 ORTHO05D008986 4.8e-77 292.0 268 57.1
AUR62038352 Chenopodium quinoa HOM05D007136 ORTHO05D008986 6.3e-77 291.6 268 57.5
Sabra10G0159100 Salix brachista HOM05D007136 ORTHO05D008986 8.2e-77 291.2 286 56.3
PGR044G0021 Punica granatum HOM05D007136 ORTHO05D008986 2.4e-76 289.7 268 56.3
Lsat_1_v5_gn_2_119701 Lactuca sativa HOM05D007136 ORTHO05D008986 4.1e-76 288.9 267 57.7
HanXRQChr14g0458151 Helianthus annuus HOM05D007136 ORTHO05D008986 1.2e-75 287.3 267 57.7
ClCG09G019950 Citrullus lanatus HOM05D007136 ORTHO05D008986 4.5e-75 285.4 268 54.1
VMungo1383G1564 Vigna mungo HOM05D007136 ORTHO05D008986 4.5e-75 285.4 268 55.6
Sed0006263 Sechium edule HOM05D007136 ORTHO05D008986 1.0e-74 284.3 268 54.1
Psat3g181320 Pisum sativum HOM05D007136 ORTHO05D008986 1.7e-74 283.5 268 56.7
EL10Ac2g03388 Beta vulgaris HOM05D007136 ORTHO05D008986 6.5e-74 281.6 281 55.2
Phvul.008G012700 Phaseolus vulgaris HOM05D007136 ORTHO05D008986 8.5e-74 281.2 268 56.0
TPR.G15525 Trifolium pratense HOM05D007136 ORTHO05D008986 8.5e-74 281.2 268 55.2
QL08p059192 Quercus lobata HOM05D007136 ORTHO05D008986 1.9e-73 280.0 388 43.3
Medtr7g024560 Medicago truncatula HOM05D007136 ORTHO05D008986 4.2e-73 278.9 268 54.5
Lj1g0011729 Lotus japonicus HOM05D007136 ORTHO05D008986 5.5e-73 278.5 266 54.9
arahy.Tifrunner.gnm1.ann1.IQ4HGL Arachis hypogaea HOM05D007136 ORTHO05D008986 7.2e-73 278.1 270 56.3
arahy.Tifrunner.gnm1.ann1.RSMT0C Arachis hypogaea HOM05D007136 ORTHO05D008986 7.2e-73 278.1 270 56.3
Hund20032 Selenicereus undatus HOM05D007136 ORTHO05D008986 2.1e-72 276.6 268 54.1
COL.COLO4_14997 Corchorus olitorius HOM05D007136 ORTHO05D008986 2.7e-72 276.2 298 52.0
Aqoxy2G02097 Aquilegia oxysepala HOM05D007136 ORTHO05D008986 4.7e-72 275.4 267 52.8
MBI05_g22899_MAGBIO Magnolia biondii HOM05D007136 ORTHO05D008986 3.9e-71 272.3 250 57.6
FAN03G0232 Fragaria x ananassa HOM05D007136 ORTHO05D008986 6.7e-71 271.6 268 54.1
CsaV3_5G026510 Cucumis sativus L. HOM05D007136 ORTHO05D008986 1.1e-70 270.8 268 52.2
Lalb_Chr10g0091721 Lupinus albus HOM05D007136 ORTHO05D008986 1.7e-69 266.9 266 52.6
MELO3C021650.2 Cucumis melo HOM05D007136 ORTHO05D008986 8.2e-69 264.6 268 50.7
Ah.16g107010 Amaranthus hybridus HOM05D007136 ORTHO05D008986 7.0e-68 261.5 266 51.5
C05p63040 Brassica napus HOM05D007136 ORTHO05D008986 1.5e-65 253.8 267 49.1
BolC5t34957H Brassica oleracea HOM05D007136 ORTHO05D008986 1.5e-65 253.8 267 49.1
A05p43340 Brassica napus HOM05D007136 ORTHO05D008986 4.2e-65 252.3 267 48.7
BraA05t23073Z Brassica rapa HOM05D007136 ORTHO05D008986 4.2e-65 252.3 267 48.7
THA.LOC104799346 Tarenaya hassleriana HOM05D007136 ORTHO05D008986 2.7e-64 249.6 268 48.1
Sp3g03000 Schrenkiella parvula HOM05D007136 ORTHO05D008986 1.0e-63 247.7 267 49.1
HPP92_001682 Vanilla planifolia HOM05D007136 ORTHO05D008986 4.0e-63 245.7 269 48.3
Aa31LG5G14590 Aethionema arabicum HOM05D007136 ORTHO05D008986 4.4e-62 242.3 267 48.3
PSO151G0201 Papaver somniferum HOM05D007136 ORTHO05D008986 1.3e-61 240.7 263 47.9
Os03g0276600 Oryza sativa ssp. japonica HOM05D007136 ORTHO05D008986 1.7e-61 240.4 267 46.8
PSO339G3352 Papaver somniferum HOM05D007136 ORTHO05D008986 4.1e-60 235.7 263 48.7
CARHR078150 Cardamine hirsuta HOM05D007136 ORTHO05D008986 5.3e-60 235.3 267 46.1
Carub.0003s0327 Capsella rubella HOM05D007136 ORTHO05D008986 2.6e-59 233.0 267 46.4
AL3G13930 Arabidopsis lyrata HOM05D007136 ORTHO05D008986 2.2e-58 229.9 267 46.8
AT3G04020 Arabidopsis thaliana HOM05D007136 ORTHO05D008986 2.9e-58 229.6 267 46.4
Thhalv10021212m.g Eutrema salsugineum HOM05D007136 ORTHO05D008986 1.5e-57 227.3 267 45.7
BcaC05g30543 Brassica carinata HOM05D007136 ORTHO05D008986 4.2e-57 225.7 250 47.6
CDE09G1315 Ceratophyllum demersum HOM05D007136 ORTHO05D008986 2.6e-54 216.5 275 46.5
Dinv31448 Davidia involucrata HOM05D007136 ORTHO05D008986 1.7e-53 213.8 171 66.7
Eucgr.J00020 Eucalyptus grandis HOM05D007136 ORTHO05D008986 2.2e-53 213.4 192 56.8
unitig_736.g22315 Utricularia gibba HOM05D007136 ORTHO05D008986 2.8e-53 213.0 246 49.2
Sc09g0007080 Simmondsia chinensis HOM05D007136 ORTHO05D008986 2.7e-51 206.5 196 56.6
Glyma.02G092900 Glycine max HOM05D007136 ORTHO05D008986 3.5e-51 206.1 267 43.8
Manes.07G114900 Manihot esculenta HOM05D007136 ORTHO05D008986 7.7e-51 204.9 196 55.1
SEGI_31981 Sequoiadendron giganteum HOM05D007136 ORTHO05D008986 8.5e-50 201.4 262 41.6
Zm00001eb012480 Zea mays HOM05D007136 ORTHO05D008986 3.4e-46 189.5 269 40.9
AUR62041861 Chenopodium quinoa HOM05D007136 ORTHO05D008986 2.7e-35 153.3 112 66.1
Pp3c12_11030 Physcomitrium patens HOM05D007136 ORTHO05D008986 4.3e-33 146.0 259 35.1
Duzib106G1934 Durio zibethinus HOM05D007136 ORTHO05D008986 1.0e-31 141.4 134 57.5
Mapoly0002s0030 Marchantia polymorpha HOM05D007136 ORTHO05D008986 1.9e-28 130.6 271 28.0
AUR62041862 Chenopodium quinoa HOM05D007136 ORTHO05D008986 3.2e-12 76.6 47 74.5
SHI07863 Sapria himalayana HOM05D007136 ORTHO05D008986 7.3e-09 65.5 62 50.0


User provided reference genes

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