Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.4e-57 226.1 117 100.0
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.7e-42 176.0 160 63.8
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.3e-42 174.1 160 63.1
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 2.5e-38 162.2 160 59.4
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 9.5e-38 160.2 160 58.1
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 4.7e-37 157.9 159 57.9
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 6.1e-37 157.5 160 56.2
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 8.0e-37 157.1 160 57.5
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 1.0e-36 156.8 160 57.5
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 3.0e-36 155.2 125 69.6
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 4.0e-36 154.8 158 57.0
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 8.9e-36 153.7 160 56.2
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 8.9e-36 153.7 158 57.6
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 8.9e-36 153.7 160 55.6
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 1.2e-35 153.3 160 56.2
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 1.2e-35 153.3 160 55.6
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 1.2e-35 153.3 158 57.0
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 1.5e-35 152.9 160 55.6
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 2.0e-35 152.5 158 56.3
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 2.0e-35 152.5 160 55.6
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 2.0e-35 152.5 160 55.6
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 2.6e-35 152.1 160 55.0
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 2.6e-35 152.1 160 55.6
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.6e-35 152.1 158 56.3
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 3.4e-35 151.8 160 56.9
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 3.4e-35 151.8 160 55.6
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 3.4e-35 151.8 160 54.4
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 3.4e-35 151.8 160 53.8
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 4.4e-35 151.4 160 55.6
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 4.4e-35 151.4 158 55.1
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 5.7e-35 151.0 158 56.3
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 7.5e-35 150.6 160 55.0
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 7.5e-35 150.6 160 55.0
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 7.5e-35 150.6 160 53.1
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 7.5e-35 150.6 160 56.2
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 7.5e-35 150.6 158 55.7
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 9.8e-35 150.2 160 54.4
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 9.8e-35 150.2 160 53.8
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 9.8e-35 150.2 160 55.6
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 1.3e-34 149.8 160 54.4
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 1.3e-34 149.8 157 57.3
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 1.7e-34 149.4 160 54.4
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 1.7e-34 149.4 160 53.8
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.7e-34 149.4 160 54.4
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.7e-34 149.4 160 54.4
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 2.2e-34 149.1 160 54.4
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 2.2e-34 149.1 160 54.4
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 2.2e-34 149.1 160 53.8
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 2.2e-34 149.1 160 54.4
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 2.8e-34 148.7 160 52.5
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.8e-34 148.7 158 53.8
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 3.7e-34 148.3 160 53.8
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 4.9e-34 147.9 158 55.1
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 4.9e-34 147.9 160 53.1
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 4.9e-34 147.9 157 56.7
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 4.9e-34 147.9 160 53.8
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 6.3e-34 147.5 160 53.1
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 6.3e-34 147.5 157 56.7
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 6.3e-34 147.5 160 53.8
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 6.3e-34 147.5 160 53.1
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 8.3e-34 147.1 160 54.4
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 8.3e-34 147.1 160 53.1
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 8.3e-34 147.1 158 55.7
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.1e-33 146.7 158 54.4
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 1.1e-33 146.7 158 53.8
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 1.4e-33 146.4 156 55.1
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 1.8e-33 146.0 158 52.5
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 2.4e-33 145.6 160 53.1
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 2.4e-33 145.6 158 52.5
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.4e-33 145.6 158 52.5
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.4e-33 145.6 158 52.5
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 2.4e-33 145.6 158 52.5
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 3.1e-33 145.2 158 54.4
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 5.4e-33 144.4 160 52.5
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 5.4e-33 144.4 156 54.5
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 7.0e-33 144.1 160 53.8
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 9.2e-33 143.7 156 54.5
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 9.2e-33 143.7 160 52.5
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 9.2e-33 143.7 160 52.5
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.2e-32 143.3 158 51.9
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 2.0e-32 142.5 160 53.1
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 2.7e-32 142.1 158 52.5
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 2.7e-32 142.1 160 51.9
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 4.5e-32 141.4 160 51.9
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 1.0e-31 140.2 158 52.5
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 1.0e-31 140.2 160 51.2
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 2.3e-31 139.0 156 53.2
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.9e-31 138.7 158 52.5
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 8.6e-31 137.1 156 53.8
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 1.1e-30 136.7 156 52.6
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 1.1e-30 136.7 160 48.8
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 1.5e-30 136.3 156 52.6
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 1.5e-30 136.3 156 52.6
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 1.9e-30 136.0 156 51.9
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 1.9e-30 136.0 156 51.9
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 1.9e-30 136.0 156 51.9
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 1.9e-30 136.0 156 51.9
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 1.9e-30 136.0 156 51.9
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 1.9e-30 136.0 160 50.6
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 2.5e-30 135.6 156 51.9
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 2.5e-30 135.6 158 47.5
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 4.3e-30 134.8 156 51.9
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 7.3e-30 134.0 156 51.9
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 7.3e-30 134.0 156 51.9
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 7.3e-30 134.0 156 51.3
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 1.6e-29 132.9 150 52.0
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 1.6e-29 132.9 158 51.3
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 3.6e-29 131.7 161 49.1
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 6.1e-29 131.0 156 50.6
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 8.0e-29 130.6 158 47.5
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.8e-28 129.4 126 61.9
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 6.8e-28 127.5 150 50.7
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 2.6e-27 125.6 160 46.9
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 4.1e-25 118.2 157 45.2
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 5.4e-25 117.9 160 43.8
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 1.7e-23 112.8 160 41.2
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 3.1e-20 102.1 158 38.6
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 2.7e-16 89.0 157 35.0
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 2.3e-15 85.9 97 53.6
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 3.9e-15 85.1 121 44.6
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 5.4e-09 64.7 74 36.5


User provided reference genes

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