Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027496 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D017724 4.1e-142 508.1 260 100.0
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 3.2e-38 162.9 186 50.0
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 5.5e-38 162.2 186 50.0
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.2e-38 161.8 184 47.8
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 9.8e-35 151.4 158 50.6
TWI77G0837 Tripterygium wilfordii HOM05D000002 ORTHO05D013260 1.1e-30 137.9 185 44.9
TAR242G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000047 8.3e-26 121.7 140 49.3
Rhsim05G0129400 Rhododendron simsii HOM05D000002 ORTHO05D000047 1.4e-25 120.9 164 43.9
Rhsim02G0139900 Rhododendron simsii HOM05D010463 ORTHO05D013260 6.6e-23 112.1 149 46.3
Atru.chr8.482 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-20 104.0 164 39.6
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-17 94.0 175 37.7
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.3e-15 87.8 179 35.8
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 1.3e-15 87.8 166 40.4
CSS0040722 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110166 8.0e-13 78.6 104 57.7
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 1.4e-09 67.8 101 35.6
CSS0030269 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D004772 1.9e-09 67.4 40 75.0
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 2.4e-09 67.0 165 27.3
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.6e-08 62.8 159 38.4
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 6.0e-08 62.4 166 23.5
CSS0008375 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.0e-07 61.6 127 40.9
CSS0030045 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.0e-07 61.6 127 40.9
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 6.6e-07 58.9 140 24.3
Hma1.2p1_0359F.1_g135490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-07 58.5 159 26.4
TWI79G1645 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 1.5e-06 57.8 88 34.1
TWI34G0134 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.9e-06 57.4 109 30.3
MD14G1033400 Malus domestica HOM05D000002 ORTHO05D000047 2.5e-06 57.0 129 32.6
TWI34G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 5.6e-06 55.8 141 31.2
RcHm_v2.0_Chr3g0453341 Rosa chinensis HOM05D000002 ORTHO05D000047 7.3e-06 55.5 177 27.7
TWI31G1243 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 7.3e-06 55.5 141 31.2
Rhsim06G0128100 Rhododendron simsii HOM05D000002 ORTHO05D000047 9.5e-06 55.1 231 30.7
Rhsim07G0255800 Rhododendron simsii HOM05D010463 ORTHO05D013260 9.5e-06 55.1 68 45.6


User provided reference genes

Program Settings