Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 4.4e-98 361.3 184 100.0
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 2.1e-63 246.1 184 73.9
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 7.3e-61 237.7 184 71.2
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 3.0e-54 215.7 184 67.4
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 2.4e-51 206.1 256 51.2
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.3e-45 185.7 185 58.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.4e-43 180.3 198 56.1
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 1.8e-43 179.9 315 41.9
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.5e-42 176.8 187 58.3
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.5e-42 176.8 186 57.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.0e-42 176.4 184 57.1
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 2.6e-42 176.0 186 59.7
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.3e-41 173.7 185 55.7
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 6.5e-41 171.4 187 55.1
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 1.1e-40 170.6 200 52.5
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 1.1e-40 170.6 185 55.1
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 2.5e-40 169.5 184 58.7
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 2.7e-39 166.0 183 57.4
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 4.6e-39 165.2 184 55.4
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 7.9e-39 164.5 184 56.0
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 7.9e-39 164.5 189 52.9
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 6.7e-38 161.4 185 57.3
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 1.6e-36 156.8 186 57.0
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 2.8e-36 156.0 185 56.8
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 8.2e-36 154.5 153 58.2
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 1.1e-35 154.1 192 52.6
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 1.4e-35 153.7 185 54.1
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.8e-35 153.3 188 51.6
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 6.9e-35 151.4 184 52.2
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 9.0e-35 151.0 188 52.7
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 9.0e-35 151.0 185 49.7
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 9.0e-35 151.0 185 50.8
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.2e-34 150.6 185 53.0
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.2e-34 150.6 185 53.0
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.4e-34 149.1 186 54.8
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 4.5e-34 148.7 187 55.6
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 5.8e-34 148.3 185 53.0
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 5.8e-34 148.3 188 50.5
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 7.6e-34 147.9 189 51.9
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 7.6e-34 147.9 188 51.6
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 7.6e-34 147.9 188 51.6
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 1.3e-33 147.1 188 50.5
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.7e-33 146.7 188 50.5
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 1.7e-33 146.7 184 51.1
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 5.0e-33 145.2 183 52.5
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 6.5e-33 144.8 184 51.1
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 6.5e-33 144.8 95 77.9
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 8.4e-33 144.4 185 50.8
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 8.4e-33 144.4 185 51.9
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 8.4e-33 144.4 185 50.8
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 2.5e-32 142.9 187 52.4
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 3.2e-32 142.5 182 52.2
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 5.5e-32 141.7 185 50.8
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 9.3e-32 141.0 185 48.6
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 9.3e-32 141.0 184 52.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 2.1e-31 139.8 191 49.2
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 2.1e-31 139.8 186 53.2
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 2.7e-31 139.4 185 50.8
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 3.5e-31 139.0 187 50.3
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 3.5e-31 139.0 187 50.3
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.9e-31 137.9 184 52.2
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.8e-30 136.7 188 50.5
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 1.8e-30 136.7 183 51.9
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.8e-30 136.7 186 51.1
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 1.5e-29 133.7 182 52.7
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 1.9e-29 133.3 184 47.8
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 2.5e-29 132.9 184 48.9
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 2.5e-29 132.9 179 46.9
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 4.3e-29 132.1 187 49.2
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.8e-28 128.6 184 48.9
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 6.3e-28 128.3 211 43.6
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 8.2e-28 127.9 191 48.7
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 1.8e-27 126.7 80 76.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 1.8e-27 126.7 80 76.2
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 2.4e-27 126.3 191 48.2
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.1e-27 125.9 185 49.7
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 4.1e-27 125.6 188 47.3
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.0e-27 124.4 185 48.6
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.0e-27 124.4 185 48.6
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 1.5e-26 123.6 183 48.6
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 1.0e-25 120.9 181 46.4
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.0e-25 120.9 185 47.6
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.4e-24 117.1 196 44.4
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 1.9e-24 116.7 184 46.7
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 5.5e-24 115.2 185 47.6
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.5e-24 115.2 185 47.6
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 7.2e-24 114.8 185 47.6
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 9.4e-24 114.4 141 52.5
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 1.2e-23 114.0 189 45.5
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 3.0e-22 109.4 94 62.8
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 5.1e-22 108.6 182 45.1
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 1.1e-21 107.5 190 44.7
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 2.5e-21 106.3 154 49.4
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 2.5e-21 106.3 154 51.3
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 9.7e-21 104.4 155 47.7
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 6.3e-20 101.7 154 48.1
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.1e-19 100.9 155 49.7
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 2.4e-19 99.8 188 42.6
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 5.9e-18 95.1 178 42.7
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 5.9e-18 95.1 260 34.6
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 1.3e-17 94.0 55 81.8
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 8.5e-17 91.3 199 41.7
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 1.1e-16 90.9 70 65.7
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.5e-16 89.7 66 71.2
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 7.2e-16 88.2 70 62.9
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 9.4e-16 87.8 187 38.0
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 2.7e-15 86.3 65 69.2
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 1.8e-14 83.6 149 43.6
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 1.1e-11 74.3 75 54.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 1.4e-11 73.9 76 51.3
SGA_v2.0_scaffold111G31380 Striga asiatica HOM05D006875 ORTHO05D008416 9.1e-11 71.2 156 39.1
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 1.6e-10 70.5 135 41.5
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 2.0e-10 70.1 156 39.7
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 2.9e-09 66.2 44 70.5
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 8.5e-09 64.7 138 39.1
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 4.2e-08 62.4 72 51.4
Lj7A129G17 Lonicera japonica HOM05D006875 ORTHO05D008416 1.0e-06 57.8 64 50.0
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 4.0e-06 55.8 120 43.3


User provided reference genes

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