Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027443 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 1.0e-81 306.6 150 100.0
CSS0024218 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.8e-65 252.7 184 71.2
CSS0024463 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 6.8e-65 250.8 148 83.8
CSS0027113 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 3.7e-63 245.0 149 81.9
CSS0018501 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 2.1e-61 239.2 148 79.7
CSS0010565 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 4.6e-61 238.0 147 81.6
CSS0046213 Camellia sinensis var. sinensis HOM05D020675 ORTHO05D000042 1.3e-60 236.5 149 79.9
CSS0037593 Camellia sinensis var. sinensis HOM05D000092 ORTHO05D000042 1.5e-59 233.0 185 67.0
RhsimUnG0018200 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.6e-32 142.5 187 44.4
Rhsim04G0054300 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.8e-31 138.7 186 46.2
Rhsim04G0055200 Rhododendron simsii HOM05D000092 ORTHO05D000042 1.9e-30 136.3 186 44.6
Rhsim04G0053600 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.4e-30 136.0 186 44.6
Rhsim04G0054600 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.2e-30 135.6 186 44.6
Rhsim04G0054000 Rhododendron simsii HOM05D000092 ORTHO05D000042 2.8e-26 122.5 166 44.0
Rhsim04G0053900 Rhododendron simsii HOM05D000092 ORTHO05D000042 3.7e-26 122.1 186 42.5
Rhsim04G0055600 Rhododendron simsii HOM05D000092 ORTHO05D000042 5.3e-25 118.2 186 42.5
Dinv01598 Davidia involucrata HOM05D000092 ORTHO05D000042 8.4e-23 110.9 178 36.5
vmacro09349 Vaccinium macrocarpon HOM05D000092 ORTHO05D000042 1.0e-20 104.0 181 38.1
Dinv05441 Davidia involucrata HOM05D000092 ORTHO05D000042 3.9e-20 102.1 161 36.0
Dinv40988 Davidia involucrata HOM05D000092 ORTHO05D000042 1.6e-18 96.7 173 34.1
Dinv05255 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-17 94.0 182 33.5
Dinv03240 Davidia involucrata HOM05D000092 ORTHO05D000042 1.4e-17 93.6 182 35.7
Dinv03248 Davidia involucrata HOM05D000092 ORTHO05D000042 1.4e-17 93.6 182 34.1
Dinv05244 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-17 93.2 180 33.9
Dinv03237 Davidia involucrata HOM05D000092 ORTHO05D000042 2.4e-17 92.8 182 35.2
Dinv03245 Davidia involucrata HOM05D000092 ORTHO05D000042 2.0e-16 89.7 186 31.7
Dinv03242 Davidia involucrata HOM05D000092 ORTHO05D000042 5.0e-15 85.1 163 33.7
Dinv18880 Davidia involucrata HOM05D000092 ORTHO05D000042 1.8e-12 76.6 133 35.3
Dinv20729 Davidia involucrata HOM05D000092 ORTHO05D000042 2.3e-12 76.3 120 36.7
Dinv20556 Davidia involucrata HOM05D000092 ORTHO05D000042 3.0e-12 75.9 170 29.4
Dinv20740 Davidia involucrata HOM05D000092 ORTHO05D000042 3.0e-12 75.9 170 29.4
Dinv12837 Davidia involucrata HOM05D000092 ORTHO05D000042 6.3e-10 68.2 100 39.0
Dinv03246 Davidia involucrata HOM05D000092 ORTHO05D000042 8.2e-10 67.8 164 32.3
Manes.02G215445 Manihot esculenta HOM05D000092 ORTHO05D000042 1.1e-09 67.4 97 38.1
Dinv20558 Davidia involucrata HOM05D000092 ORTHO05D000042 5.3e-09 65.1 168 28.0
Dinv20738 Davidia involucrata HOM05D000092 ORTHO05D000042 5.3e-09 65.1 168 28.0
Manes.07G060700 Manihot esculenta HOM05D000092 ORTHO05D000042 5.3e-09 65.1 80 40.0
Manes.07G062324 Manihot esculenta HOM05D000092 ORTHO05D000042 5.3e-09 65.1 99 37.4
Manes.07G062348 Manihot esculenta HOM05D000092 ORTHO05D000042 5.3e-09 65.1 99 38.4
Dinv18646 Davidia involucrata HOM05D000092 ORTHO05D000042 6.9e-09 64.7 100 38.0
Dinv26261 Davidia involucrata HOM05D000092 ORTHO05D000042 6.9e-09 64.7 100 38.0
Manes.02G215405 Manihot esculenta HOM05D000092 ORTHO05D000042 6.9e-09 64.7 97 37.1
Dinv04828 Davidia involucrata HOM05D000092 ORTHO05D000042 9.1e-09 64.3 171 27.5
Dinv12839 Davidia involucrata HOM05D000092 ORTHO05D000042 9.1e-09 64.3 69 46.4
Manes.02G215400 Manihot esculenta HOM05D000092 ORTHO05D000042 9.1e-09 64.3 97 37.1
Manes.02G215420 Manihot esculenta HOM05D000092 ORTHO05D000042 9.1e-09 64.3 97 37.1
Manes.02G215615 Manihot esculenta HOM05D000092 ORTHO05D000042 9.1e-09 64.3 97 37.1
Manes.02G215120 Manihot esculenta HOM05D000092 ORTHO05D000042 1.2e-08 63.9 97 37.1
Manes.02G215430 Manihot esculenta HOM05D000092 ORTHO05D000042 2.0e-08 63.2 97 37.1
Potri.005G061860 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.0e-08 63.2 73 43.8
Manes.02G215000 Manihot esculenta HOM05D000092 ORTHO05D000042 2.6e-08 62.8 97 36.1
Manes.02G215425 Manihot esculenta HOM05D000092 ORTHO05D000042 2.6e-08 62.8 97 36.1
Manes.07G061500 Manihot esculenta HOM05D000092 ORTHO05D000042 2.6e-08 62.8 99 37.4
PGR042G3726 Punica granatum HOM05D000092 ORTHO05D000042 2.6e-08 62.8 149 30.2
Thecc.05G297500 Theobroma cacao HOM05D000092 ORTHO05D000042 2.6e-08 62.8 94 31.9
Dinv07585 Davidia involucrata HOM05D000092 ORTHO05D000042 3.4e-08 62.4 99 39.4
Manes.07G060300 Manihot esculenta HOM05D000092 ORTHO05D000042 3.4e-08 62.4 67 46.3
Manes.02G215325 Manihot esculenta HOM05D000092 ORTHO05D000042 4.5e-08 62.0 97 37.1
Manes.02G215700 Manihot esculenta HOM05D000092 ORTHO05D000042 4.5e-08 62.0 97 37.1
Manes.07G060708 Manihot esculenta HOM05D000092 ORTHO05D000042 4.5e-08 62.0 99 37.4
Thecc.05G211400 Theobroma cacao HOM05D000092 ORTHO05D000042 4.5e-08 62.0 140 30.0
VMungo0331G0065 Vigna mungo HOM05D000092 ORTHO05D000042 5.9e-08 61.6 140 32.9
GSVIVG01023548001 Vitis vinifera HOM05D000092 ORTHO05D000042 5.9e-08 61.6 99 42.4
Manes.07G062308 Manihot esculenta HOM05D000092 ORTHO05D000042 7.7e-08 61.2 67 46.3
Dinv07581 Davidia involucrata HOM05D000092 ORTHO05D000042 1.0e-07 60.8 77 44.2
Manes.07G061980 Manihot esculenta HOM05D000092 ORTHO05D000042 1.0e-07 60.8 67 44.8
CiPaw.08G175500 Carya illinoinensis HOM05D000092 ORTHO05D000042 1.3e-07 60.5 132 31.1
Dinv07579 Davidia involucrata HOM05D000092 ORTHO05D000042 1.3e-07 60.5 89 40.4
Manes.07G060750 Manihot esculenta HOM05D000092 ORTHO05D000042 1.3e-07 60.5 158 29.1
Manes.07G063100 Manihot esculenta HOM05D000092 ORTHO05D000042 1.3e-07 60.5 67 44.8
Dinv40446 Davidia involucrata HOM05D000092 ORTHO05D000042 1.7e-07 60.1 83 37.3
Glyma.07G065000 Glycine max HOM05D000092 ORTHO05D000042 1.7e-07 60.1 68 41.2
GSVIVG01023566001 Vitis vinifera HOM05D000092 ORTHO05D000042 1.7e-07 60.1 93 39.8
Manes.07G062340 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-07 59.7 67 44.8
Manes.07G062404 Manihot esculenta HOM05D000092 ORTHO05D000042 2.2e-07 59.7 67 44.8
Dinv10937 Davidia involucrata HOM05D000092 ORTHO05D000042 2.9e-07 59.3 79 40.5
Manes.07G062700 Manihot esculenta HOM05D000092 ORTHO05D000042 3.8e-07 58.9 76 39.5
PGR042G0832 Punica granatum HOM05D000092 ORTHO05D000042 3.8e-07 58.9 72 41.7
QL03p002957 Quercus lobata HOM05D000092 ORTHO05D000042 3.8e-07 58.9 131 29.0
Lj1g0024619 Lotus japonicus HOM05D000092 ORTHO05D000042 5.0e-07 58.5 91 34.1
RcHm_v2.0_Chr5g0080281 Rosa chinensis HOM05D000092 ORTHO05D000042 5.0e-07 58.5 105 34.3
Manes.10G028600 Manihot esculenta HOM05D000092 ORTHO05D000042 6.5e-07 58.2 76 39.5
Ca_27735_v3 Cicer arietinum L. HOM05D000092 ORTHO05D000042 8.5e-07 57.8 68 39.7
COL.COLO4_32833 Corchorus olitorius HOM05D000092 ORTHO05D000042 8.5e-07 57.8 103 34.0
Manes.10G028501 Manihot esculenta HOM05D000092 ORTHO05D000042 8.5e-07 57.8 76 39.5
QL03p003203 Quercus lobata HOM05D000092 ORTHO05D000042 8.5e-07 57.8 69 39.1
arahy.Tifrunner.gnm1.ann1.BPD95K Arachis hypogaea HOM05D000092 ORTHO05D000042 1.1e-06 57.4 96 37.5
arahy.Tifrunner.gnm1.ann1.TXZ93S Arachis hypogaea HOM05D000092 ORTHO05D000042 1.1e-06 57.4 96 37.5
Dinv07584 Davidia involucrata HOM05D000092 ORTHO05D000042 1.1e-06 57.4 103 34.0
TPR.G40322 Trifolium pratense HOM05D000092 ORTHO05D000042 1.1e-06 57.4 144 28.5
VMungo0331G0195 Vigna mungo HOM05D000092 ORTHO05D000042 1.1e-06 57.4 82 35.4
Eucgr.L00073 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.4e-06 57.0 122 29.5
FAN11G3620 Fragaria x ananassa HOM05D000092 ORTHO05D000042 1.4e-06 57.0 150 29.3
VMungo0331G0485 Vigna mungo HOM05D000092 ORTHO05D000042 1.4e-06 57.0 93 31.2
Eucgr.L00094 Eucalyptus grandis HOM05D000092 ORTHO05D000042 1.9e-06 56.6 74 40.5
VMungo0166G0001 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 40.9
VMungo0331G1995 Vigna mungo HOM05D000092 ORTHO05D000042 1.9e-06 56.6 66 40.9
Glyma.U031914 Glycine max HOM05D000092 ORTHO05D000042 2.5e-06 56.2 68 42.6
Potri.005G062130 Populus trichocarpa HOM05D000092 ORTHO05D000042 2.5e-06 56.2 103 32.0
Duzib192G0626 Durio zibethinus HOM05D000092 ORTHO05D000042 3.2e-06 55.8 97 37.1
Glyma.07G065600 Glycine max HOM05D000092 ORTHO05D000042 3.2e-06 55.8 68 38.2
Potri.013G027300 Populus trichocarpa HOM05D000092 ORTHO05D000042 3.2e-06 55.8 67 43.3
VMungo0331G0510 Vigna mungo HOM05D000092 ORTHO05D000042 3.2e-06 55.8 66 40.9
Eucgr.G01355 Eucalyptus grandis HOM05D000092 ORTHO05D000042 4.2e-06 55.5 108 34.3
Manes.07G060866 Manihot esculenta HOM05D000092 ORTHO05D000042 4.2e-06 55.5 67 40.3
Phvul.010G104500 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 4.2e-06 55.5 85 35.3
Dinv02874 Davidia involucrata HOM05D000092 ORTHO05D000042 5.5e-06 55.1 76 38.2
Dinv08246 Davidia involucrata HOM05D000092 ORTHO05D000042 5.5e-06 55.1 102 37.3
Manes.03G060801 Manihot esculenta HOM05D000092 ORTHO05D000042 5.5e-06 55.1 85 37.6
Manes.07G062356 Manihot esculenta HOM05D000092 ORTHO05D000042 5.5e-06 55.1 67 41.8
Phvul.008G071966 Phaseolus vulgaris HOM05D000092 ORTHO05D000042 5.5e-06 55.1 103 31.1
Sabra13G0014000 Salix brachista HOM05D000092 ORTHO05D000042 5.5e-06 55.1 68 44.1
Sabra13G0018000 Salix brachista HOM05D000092 ORTHO05D000042 5.5e-06 55.1 113 31.0
Sabra13G0018500 Salix brachista HOM05D000092 ORTHO05D000042 5.5e-06 55.1 87 36.8
Dinv02211 Davidia involucrata HOM05D000092 ORTHO05D000042 7.2e-06 54.7 84 35.7
Gorai.011G294500 Gossypium raimondii HOM05D000092 ORTHO05D000042 7.2e-06 54.7 105 33.3
QL03p002643 Quercus lobata HOM05D000092 ORTHO05D000042 7.2e-06 54.7 91 35.2
Glyma.07G063300 Glycine max HOM05D000092 ORTHO05D000042 9.4e-06 54.3 68 39.7
Manes.08G163511 Manihot esculenta HOM05D000092 ORTHO05D000042 9.4e-06 54.3 72 37.5
Potri.005G042400 Populus trichocarpa HOM05D000092 ORTHO05D000042 9.4e-06 54.3 100 36.0
Sabra13G0013900 Salix brachista HOM05D000092 ORTHO05D000042 9.4e-06 54.3 68 42.6


User provided reference genes

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