Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027435 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 8.5e-105 383.6 189 100.0
CSS0008557 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 1.2e-37 160.6 188 51.1
CSS0015024 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.1e-18 96.7 94 52.1
CSS0007549 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 5.8e-13 78.6 116 44.8
Lj2C1035G10 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-11 73.2 73 43.8
CSS0038789 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 9.3e-11 71.2 124 40.3
CSS0040716 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 2.7e-10 69.7 102 43.1
Lj4P664T25 Lonicera japonica HOM05D002180 ORTHO05D001339 2.7e-10 69.7 62 48.4
Lj7P219T9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.5e-10 69.3 62 48.4
Lj2A942G29 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-10 68.6 62 46.8
Lj6A524T43 Lonicera japonica HOM05D002180 ORTHO05D001339 6.1e-10 68.6 139 32.4
Lj2P950T16 Lonicera japonica HOM05D002180 ORTHO05D001339 7.9e-10 68.2 61 49.2
CSS0037907 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.0e-09 67.8 151 33.8
CSS0040560 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.0e-09 67.8 74 48.6
Lj2A804T55 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-09 67.8 158 30.4
Lj3C303G1 Lonicera japonica HOM05D002180 ORTHO05D001339 1.0e-09 67.8 72 44.4
Lj7A477T78 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-09 67.4 62 48.4
CSS0000405 Camellia sinensis var. sinensis HOM05D019597 ORTHO05D001339 1.8e-09 67.0 60 53.3
Lj4C42T8 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-09 67.0 116 34.5
CSS0049109 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 3.0e-09 66.2 98 43.9
Lj6C103T11 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-09 65.9 120 34.2
Lj8A507T31 Lonicera japonica HOM05D002180 ORTHO05D001339 3.9e-09 65.9 71 42.3
Lj3P654T27 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-09 65.5 62 41.9
Lj9C659T14 Lonicera japonica HOM05D002180 ORTHO05D001339 5.1e-09 65.5 62 46.8
Lj2C7T5 Lonicera japonica HOM05D002180 ORTHO05D001339 8.7e-09 64.7 62 46.8
Lj7C730T4 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-08 64.3 62 45.2
Lj8P504T15 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-08 64.3 59 45.8
Lj2C9T6 Lonicera japonica HOM05D002180 ORTHO05D001339 2.5e-08 63.2 60 46.7
Lj1A1140T45 Lonicera japonica HOM05D002180 ORTHO05D001339 3.3e-08 62.8 62 45.2
Lj5C665G8 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-08 62.4 62 46.8
Lj6A103G52 Lonicera japonica HOM05D002180 ORTHO05D001339 4.3e-08 62.4 82 37.8
Lj1C27T4 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 121 31.4
Lj2C7T4 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 62 45.2
Lj2P870T17 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 62 46.8
Lj7C583T16 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 62 46.8
Lj7P755T15 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 49 53.1
Lj8P495T20 Lonicera japonica HOM05D002180 ORTHO05D001339 5.7e-08 62.0 62 46.8
Lj6C448T6 Lonicera japonica HOM05D002180 ORTHO05D001339 7.4e-08 61.6 64 48.4
Lj6P507T14 Lonicera japonica HOM05D002180 ORTHO05D001339 7.4e-08 61.6 64 48.4
Lj7C704T20 Lonicera japonica HOM05D002180 ORTHO05D001339 7.4e-08 61.6 62 43.5
Lju41C13G9 Lonicera japonica HOM05D002180 ORTHO05D001339 7.4e-08 61.6 62 43.5
Lj5C655G9 Lonicera japonica HOM05D002180 ORTHO05D001339 9.7e-08 61.2 62 43.5
Lj2C1001T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-07 60.8 62 41.9
Lj3C991T5 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-07 60.8 82 36.6
Lj7C117G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-07 60.8 62 41.9
Lj7C160G16 Lonicera japonica HOM05D000219 ORTHO05D004649 1.3e-07 60.8 62 43.5
Lju1819C2G19 Lonicera japonica HOM05D001942 ORTHO05D001996 1.3e-07 60.8 62 41.9
Lju432C4T3 Lonicera japonica HOM05D002180 ORTHO05D001339 1.3e-07 60.8 136 30.1
Lj1A354T50 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-07 60.5 64 46.9
Lj7P583T27 Lonicera japonica HOM05D002180 ORTHO05D001339 1.6e-07 60.5 62 43.5
Lj2C47T11 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-07 59.7 62 41.9
Lj4C817G2 Lonicera japonica HOM05D002180 ORTHO05D001339 2.8e-07 59.7 62 40.3
CSS0039691 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 3.7e-07 59.3 90 37.8
Lj7C452G9 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-07 59.3 62 41.9
Lj7C629T7 Lonicera japonica HOM05D002180 ORTHO05D001339 3.7e-07 59.3 64 46.9
Lj1P776T18 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 58.9 44 59.1
Lj4C429T0 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 58.9 63 47.6
Lj6P285T23 Lonicera japonica HOM05D002180 ORTHO05D001339 4.8e-07 58.9 62 41.9
Lj1A438T30 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-07 58.5 61 45.9
Lj1C294T1 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-07 58.5 63 47.6
Lj2C800T8 Lonicera japonica HOM05D002180 ORTHO05D001339 6.3e-07 58.5 128 29.7
Lj5A834G28 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-06 57.8 52 48.1
Lj7A757T38 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-06 57.8 49 49.0
Lj9P555T21 Lonicera japonica HOM05D002180 ORTHO05D001339 1.1e-06 57.8 40 57.5
Lj2C149T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-06 57.4 43 55.8
Lj7C284T2 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-06 57.4 43 55.8
Lj7C641G7 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-06 57.4 75 36.0
Lj7P754T25 Lonicera japonica HOM05D002180 ORTHO05D001339 1.4e-06 57.4 58 44.8
Lj1A1036T17 Lonicera japonica HOM05D002180 ORTHO05D001339 1.8e-06 57.0 43 53.5
Lj5C270G4 Lonicera japonica HOM05D001829 ORTHO05D001339 1.8e-06 57.0 82 35.4
Lj2C953T7 Lonicera japonica HOM05D002180 ORTHO05D001339 2.4e-06 56.6 49 46.9
Lj5C600G1 Lonicera japonica HOM05D002180 ORTHO05D003085 4.1e-06 55.8 61 39.3
Lj5P747T21 Lonicera japonica HOM05D002180 ORTHO05D001339 4.1e-06 55.8 62 46.8
Lj9P474T24 Lonicera japonica HOM05D009066 ORTHO05D001339 4.1e-06 55.8 63 44.4
Lj2C818T1 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-06 55.5 67 40.3
Lj3C63T0 Lonicera japonica HOM05D009066 ORTHO05D001339 5.3e-06 55.5 120 32.5
Lju110A3T19 Lonicera japonica HOM05D002180 ORTHO05D001339 5.3e-06 55.5 60 43.3
CSS0004318 Camellia sinensis var. sinensis HOM05D002180 ORTHO05D001339 6.9e-06 55.1 30 76.7
Lj3C270T6 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-06 55.1 146 26.7
Lj4P539T35 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-06 55.1 61 44.3
Lj9P310T15 Lonicera japonica HOM05D002180 ORTHO05D001339 6.9e-06 55.1 120 33.3
CSS0038024 Camellia sinensis var. sinensis HOM05D003480 ORTHO05D001339 9.0e-06 54.7 33 72.7


User provided reference genes

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