Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027430 Camellia sinensis var. sinensis HOM05D004686 ORTHO05D005988 1.7e-70 269.2 134 100.0
ECA238G0678 Erigeron canadensis HOM05D004686 ORTHO05D005988 7.2e-42 174.1 95 88.4
Lj2C31G19 Lonicera japonica HOM05D004686 ORTHO05D005988 7.2e-42 174.1 93 90.3
Dinv02032 Davidia involucrata HOM05D004686 ORTHO05D005988 2.1e-41 172.6 93 90.3
Actinidia34718 Actinidia chinensis HOM05D004686 ORTHO05D005988 3.6e-41 171.8 93 90.3
TAR633G2407 Trochodendron aralioides HOM05D004686 ORTHO05D005988 4.7e-41 171.4 95 88.4
Rhsim03G0100800 Rhododendron simsii HOM05D004686 ORTHO05D005988 6.1e-41 171.0 93 89.2
GSVIVG01011272001 Vitis vinifera HOM05D004686 ORTHO05D005988 6.1e-41 171.0 93 89.2
HanXRQChr11g0342241 Helianthus annuus HOM05D004686 ORTHO05D005988 8.0e-41 170.6 93 90.3
Oeu030507.2 Olea europaea HOM05D004686 ORTHO05D005988 8.0e-41 170.6 103 81.6
Dinv11852 Davidia involucrata HOM05D004686 ORTHO05D005988 1.0e-40 170.2 93 89.2
Zm00001eb346110 Zea mays HOM05D004686 ORTHO05D005988 1.4e-40 169.9 93 87.1
Lsat_1_v5_gn_2_104981 Lactuca sativa HOM05D004686 ORTHO05D005988 1.8e-40 169.5 93 89.2
QL04p044815 Quercus lobata HOM05D004686 ORTHO05D005988 2.3e-40 169.1 93 88.2
Gohir.D05G288800 Gossypium hirsutum HOM05D004686 ORTHO05D005988 3.0e-40 168.7 93 88.2
Gorai.009G303900 Gossypium raimondii HOM05D004686 ORTHO05D005988 3.0e-40 168.7 93 88.2
Peaxi162Scf00173g00068 Petunia axillaris HOM05D004686 ORTHO05D005988 4.0e-40 168.3 92 88.0
PGR142G2157 Punica granatum HOM05D004686 ORTHO05D005988 5.2e-40 167.9 93 86.0
RcHm_v2.0_Chr2g0118911 Rosa chinensis HOM05D004686 ORTHO05D005988 5.2e-40 167.9 93 86.0
FAN26G2913 Fragaria x ananassa HOM05D004686 ORTHO05D005988 6.8e-40 167.5 93 86.0
FAN28G2368 Fragaria x ananassa HOM05D004686 ORTHO05D005988 6.8e-40 167.5 93 86.0
Dinv09596 Davidia involucrata HOM05D004686 ORTHO05D005988 8.9e-40 167.2 93 88.2
Cfa007809 Carpinus fangiana HOM05D004686 ORTHO05D005988 1.2e-39 166.8 93 86.0
Ciclev10032367m.g Citrus clementina HOM05D004686 ORTHO05D005988 1.2e-39 166.8 93 87.1
MD04G1028700 Malus domestica HOM05D004686 ORTHO05D005988 1.2e-39 166.8 93 84.9
Rhsim09G0142900 Rhododendron simsii HOM05D004686 ORTHO05D005988 1.5e-39 166.4 93 88.2
arahy.Tifrunner.gnm1.ann1.GZ7TSK Arachis hypogaea HOM05D004686 ORTHO05D005988 2.0e-39 166.0 93 84.9
arahy.Tifrunner.gnm1.ann1.R2EQ4U Arachis hypogaea HOM05D004686 ORTHO05D005988 2.0e-39 166.0 93 84.9
FvH4_1g23510 Fragaria vesca HOM05D004686 ORTHO05D005988 2.0e-39 166.0 93 84.9
FAN19G3154 Fragaria x ananassa HOM05D004686 ORTHO05D005988 2.0e-39 166.0 93 84.9
Oeu030509.1 Olea europaea HOM05D004686 ORTHO05D005988 2.0e-39 166.0 125 70.4
Prupe.2G079800 Prunus persica HOM05D004686 ORTHO05D005988 2.0e-39 166.0 93 84.9
Haze_14265 Corylus avellana HOM05D004686 ORTHO05D005988 2.6e-39 165.6 93 86.0
Gohir.A05G287600 Gossypium hirsutum HOM05D004686 ORTHO05D005988 2.6e-39 165.6 93 87.1
Carub.0003s2093 Capsella rubella HOM05D004686 ORTHO05D005988 3.4e-39 165.2 93 84.9
CiPaw.13G038400 Carya illinoinensis HOM05D004686 ORTHO05D005988 3.4e-39 165.2 93 86.0
Ca_10211_v3 Cicer arietinum L. HOM05D000283 ORTHO05D005391 3.4e-39 165.2 93 86.0
Duzib128G0508 Durio zibethinus HOM05D004686 ORTHO05D005988 3.4e-39 165.2 93 86.0
Nitab4.5_0003774g0030 Nicotiana tabacum HOM05D004686 ORTHO05D005988 3.4e-39 165.2 92 88.0
PGSC0003DMG400019464 Solanum tuberosum HOM05D004686 ORTHO05D005988 3.4e-39 165.2 93 87.1
AT3G20970 Arabidopsis thaliana HOM05D004686 ORTHO05D005988 4.4e-39 164.9 93 83.9
arahy.Tifrunner.gnm1.ann1.XFSN2Q Arachis hypogaea HOM05D004686 ORTHO05D005988 4.4e-39 164.9 93 84.9
HanXRQChr07g0194231 Helianthus annuus HOM05D004686 ORTHO05D005988 4.4e-39 164.9 93 86.0
Solyc11g007120.2 Solanum lycopersicum HOM05D004686 ORTHO05D005988 4.4e-39 164.9 93 87.1
Sopen11g003040 Solanum pennellii HOM05D004686 ORTHO05D005988 4.4e-39 164.9 93 87.1
CAN.G730.34 Capsicum annuum HOM05D004686 ORTHO05D005988 5.7e-39 164.5 93 84.9
Nn5g28600 Nelumbo nucifera HOM05D004686 ORTHO05D005988 5.7e-39 164.5 92 85.9
TPR.G10412 Trifolium pratense HOM05D004686 ORTHO05D005988 5.7e-39 164.5 93 86.0
TAR636G3245 Trochodendron aralioides HOM05D004686 ORTHO05D005988 5.7e-39 164.5 90 90.0
ATR0820G097 Amborella trichopoda HOM05D004686 ORTHO05D005988 7.5e-39 164.1 93 84.9
Lj5g0008296 Lotus japonicus HOM05D004686 ORTHO05D005988 7.5e-39 164.1 93 83.9
BcaC05g28207 Brassica carinata HOM05D004686 ORTHO05D005988 9.8e-39 163.7 93 82.8
C05p43110 Brassica napus HOM05D004686 ORTHO05D005988 9.8e-39 163.7 93 82.8
BolC5t33041H Brassica oleracea HOM05D004686 ORTHO05D005988 9.8e-39 163.7 93 82.8
Sp3g18970 Schrenkiella parvula HOM05D004686 ORTHO05D005988 9.8e-39 163.7 93 82.8
Atru.chr12.1003 Acer truncatum HOM05D004686 ORTHO05D005988 1.3e-38 163.3 93 86.0
CARHR096860 Cardamine hirsuta HOM05D004686 ORTHO05D005988 1.3e-38 163.3 93 82.8
Nitab4.5_0001437g0190 Nicotiana tabacum HOM05D004686 ORTHO05D005988 1.3e-38 163.3 92 87.0
Os05g0155300 Oryza sativa ssp. japonica HOM05D004686 ORTHO05D005988 1.3e-38 163.3 93 83.9
PSO339G5017 Papaver somniferum HOM05D004686 ORTHO05D005988 1.3e-38 163.3 93 84.9
Thecc.10G107700 Theobroma cacao HOM05D004686 ORTHO05D005988 1.3e-38 163.3 92 84.8
Aqoxy3G00701 Aquilegia oxysepala HOM05D004686 ORTHO05D005988 1.7e-38 162.9 92 84.8
Eucgr.G02697 Eucalyptus grandis HOM05D004686 ORTHO05D005988 1.7e-38 162.9 92 83.7
A05p27770 Brassica napus HOM05D004686 ORTHO05D005988 2.2e-38 162.5 93 81.7
BraA05t21664Z Brassica rapa HOM05D004686 ORTHO05D005988 2.2e-38 162.5 93 81.7
BcaB06g26171 Brassica carinata HOM05D004686 ORTHO05D005988 2.9e-38 162.2 93 81.7
AUR62037089 Chenopodium quinoa HOM05D004686 ORTHO05D005988 2.9e-38 162.2 93 83.9
Thhalv10021272m.g Eutrema salsugineum HOM05D004686 ORTHO05D005988 2.9e-38 162.2 93 80.6
Phvul.007G008000 Phaseolus vulgaris HOM05D004686 ORTHO05D005988 4.9e-38 161.4 93 81.7
Psat6g239000 Pisum sativum HOM05D004686 ORTHO05D005988 4.9e-38 161.4 93 83.9
VMungo0720G1764 Vigna mungo HOM05D004686 ORTHO05D005988 4.9e-38 161.4 93 81.7
Manes.10G058150 Manihot esculenta HOM05D004686 ORTHO05D005988 6.4e-38 161.0 92 84.8
Sc20g0001200 Simmondsia chinensis HOM05D004686 ORTHO05D005988 6.4e-38 161.0 93 83.9
TWI63G0038 Tripterygium wilfordii HOM05D004686 ORTHO05D005988 6.4e-38 161.0 92 83.7
HPP92_001974 Vanilla planifolia HOM05D004686 ORTHO05D005988 6.4e-38 161.0 92 85.9
Ah.12g062170 Amaranthus hybridus HOM05D004686 ORTHO05D005988 8.3e-38 160.6 93 82.8
arahy.Tifrunner.gnm1.ann1.N4KLNP Arachis hypogaea HOM05D004686 ORTHO05D005988 1.1e-37 160.2 93 81.7
MSTRG.9090 Avicennia marina HOM05D004686 ORTHO05D005988 1.1e-37 160.2 93 81.7
EL10Ac5g11629 Beta vulgaris HOM05D004686 ORTHO05D005988 1.1e-37 160.2 92 83.7
Sabra10G0185800 Salix brachista HOM05D001373 ORTHO05D005988 1.1e-37 160.2 92 84.8
CANSAT56G3264 Cannabis sativa HOM05D004686 ORTHO05D005988 1.4e-37 159.8 92 83.7
AUR62038365 Chenopodium quinoa HOM05D004686 ORTHO05D005988 1.4e-37 159.8 93 81.7
Cc02_g09830 Coffea canephora HOM05D004686 ORTHO05D005988 1.4e-37 159.8 93 83.9
Medtr1g069215 Medicago truncatula HOM05D004686 ORTHO05D005988 1.4e-37 159.8 93 82.8
Medtr3g073070 Medicago truncatula HOM05D004686 ORTHO05D005988 1.4e-37 159.8 93 82.8
THA.LOC104816877 Tarenaya hassleriana HOM05D004686 ORTHO05D005988 1.4e-37 159.8 93 81.7
unitig_0.g763 Utricularia gibba HOM05D004686 ORTHO05D005988 1.4e-37 159.8 92 82.6
Lalb_Chr06g0164101 Lupinus albus HOM05D004686 ORTHO05D005988 1.8e-37 159.5 92 82.6
MELO3C019892.2 Cucumis melo HOM05D004686 ORTHO05D005988 2.4e-37 159.1 92 82.6
CsaV3_6G004170 Cucumis sativus L. HOM05D004686 ORTHO05D005988 2.4e-37 159.1 92 82.6
ClCG08G008200 Citrullus lanatus HOM05D004686 ORTHO05D005988 3.2e-37 158.7 92 82.6
Migut.F00905 Erythranthe guttata HOM05D004686 ORTHO05D005988 3.2e-37 158.7 91 84.6
Sabra08G0014900 Salix brachista HOM05D004686 ORTHO05D005988 3.2e-37 158.7 92 82.6
THA.LOC104817910 Tarenaya hassleriana HOM05D004686 ORTHO05D005988 3.2e-37 158.7 93 81.7
Aqoxy2G01234 Aquilegia oxysepala HOM05D004686 ORTHO05D005988 4.1e-37 158.3 92 83.7
Potri.010G237400 Populus trichocarpa HOM05D004686 ORTHO05D005988 4.1e-37 158.3 92 82.6
SalBow6G2690 Salvia bowleyana HOM05D004686 ORTHO05D005988 4.1e-37 158.3 92 80.4
Sed0018572 Sechium edule HOM05D004686 ORTHO05D005988 4.1e-37 158.3 92 81.5
SEGI_01464 Sequoiadendron giganteum HOM05D004686 ORTHO05D005988 5.4e-37 157.9 93 80.6
Cpa.g.sc563.1 Carica papaya HOM05D004686 ORTHO05D005988 7.0e-37 157.5 92 82.6
DCAR_019313 Daucus carota HOM05D004686 ORTHO05D005988 7.0e-37 157.5 93 80.6
Glyma.20G242200 Glycine max HOM05D004686 ORTHO05D005988 7.0e-37 157.5 92 80.4
BcaC06g36644 Brassica carinata HOM05D004686 ORTHO05D005988 9.2e-37 157.1 108 71.3
BolC7t40596H Brassica oleracea HOM05D004686 ORTHO05D005988 9.2e-37 157.1 108 71.3
PSO384G4844 Papaver somniferum HOM05D004686 ORTHO05D005988 9.2e-37 157.1 93 80.6
Atru.chr4.937 Acer truncatum HOM05D004686 ORTHO05D005988 2.0e-36 156.0 92 83.7
Carub.0001s4026 Capsella rubella HOM05D004686 ORTHO05D005988 2.0e-36 156.0 92 78.3
Aa31LG10G3560 Aethionema arabicum HOM05D004686 ORTHO05D005988 5.9e-36 154.5 92 78.3
CARHR041540 Cardamine hirsuta HOM05D004686 ORTHO05D005988 5.9e-36 154.5 92 77.2
BcaC08g43308 Brassica carinata HOM05D004686 ORTHO05D005988 7.8e-36 154.1 92 77.2
C06p06550 Brassica napus HOM05D004686 ORTHO05D005988 7.8e-36 154.1 92 77.2
AL1G59240 Arabidopsis lyrata HOM05D004686 ORTHO05D005988 1.0e-35 153.7 92 77.2
BcaB07g33585 Brassica carinata HOM05D004686 ORTHO05D005988 1.0e-35 153.7 92 76.1
A06p02520 Brassica napus HOM05D004686 ORTHO05D005988 1.0e-35 153.7 92 75.0
C07p01900 Brassica napus HOM05D004686 ORTHO05D005988 1.0e-35 153.7 93 78.5
BraA06t23459Z Brassica rapa HOM05D004686 ORTHO05D005988 1.0e-35 153.7 92 76.1
Thhalv10011711m.g Eutrema salsugineum HOM05D004686 ORTHO05D005988 1.0e-35 153.7 92 77.2
SGA_v2.0_scaffold62G21346 Striga asiatica HOM05D004686 ORTHO05D005988 1.0e-35 153.7 93 79.6
AT1G51390 Arabidopsis thaliana HOM05D004686 ORTHO05D005988 2.3e-35 152.5 92 76.1
Sp1g38060 Schrenkiella parvula HOM05D004686 ORTHO05D005988 2.3e-35 152.5 92 75.0
BolC6t35767H Brassica oleracea HOM05D004686 ORTHO05D005988 5.0e-35 151.4 92 76.1
AagrBONN_evm.TU.Sc2ySwM_117.1090 Anthoceros agrestis HOM05D004686 ORTHO05D005988 8.6e-35 150.6 93 76.3
Pp3c3_25460 Physcomitrium patens HOM05D004686 ORTHO05D005988 1.5e-34 149.8 93 79.6
BcaC05g26273 Brassica carinata HOM05D004686 ORTHO05D005988 5.6e-34 147.9 96 77.1
SMO119G0422 Selaginella moellendorffii HOM05D004686 ORTHO05D005988 5.6e-34 147.9 92 75.0
Mapoly0010s0052 Marchantia polymorpha HOM05D004686 ORTHO05D005988 1.6e-33 146.4 92 75.0
AagrBONN_evm.TU.Sc2ySwM_117.3971 Anthoceros agrestis HOM05D004686 ORTHO05D005988 1.4e-32 143.3 93 75.3
CDE08G1288 Ceratophyllum demersum HOM05D004686 ORTHO05D005988 1.4e-32 143.3 92 77.2
AagrBONN_evm.TU.Sc2ySwM_362.2258 Anthoceros agrestis HOM05D004686 ORTHO05D005988 3.1e-32 142.1 93 73.1
CBR_g48305 Chara braunii HOM05D004686 ORTHO05D005988 8.9e-32 140.6 92 70.7
Pp3c10_14710 Physcomitrium patens HOM05D004686 ORTHO05D005988 1.5e-31 139.8 93 71.0
Cre12.g504150 Chlamydomonas reinhardtii HOM05D004686 ORTHO05D005988 6.4e-30 134.4 92 67.4
Potri.008G022000 Populus trichocarpa HOM05D004686 ORTHO05D005988 3.2e-29 132.1 80 80.0
Migut.F01616 Erythranthe guttata HOM05D004686 ORTHO05D005988 2.7e-28 129.0 93 72.0
MCO10G342 Micromonas commoda HOM05D004686 ORTHO05D005988 6.0e-28 127.9 92 65.2
PRCOL_00006553 Prasinoderma coloniale HOM05D004686 ORTHO05D005988 6.8e-24 114.4 92 55.4
Nitab4.5_0001437g0120 Nicotiana tabacum HOM05D004686 ORTHO05D005988 9.8e-23 110.5 93 64.5
Psat7g160920 Pisum sativum HOM05D004686 ORTHO05D005988 8.3e-22 107.5 69 75.4
Cfa026205 Carpinus fangiana HOM05D004686 ORTHO05D005988 1.1e-21 107.1 100 53.0
C05p22850 Brassica napus HOM05D004686 ORTHO05D005988 6.0e-20 101.3 93 59.1
Rhsim03G0100900 Rhododendron simsii HOM05D004686 ORTHO05D005988 4.7e-17 91.7 56 76.8
Haze_26891 Corylus avellana HOM05D004686 ORTHO05D005988 1.1e-16 90.5 94 44.7
Psat3g105760 Pisum sativum HOM05D004686 ORTHO05D005988 1.4e-16 90.1 56 78.6
AagrBONN_evm.TU.Sc2ySwM_117.3974 Anthoceros agrestis HOM05D004686 ORTHO05D005988 5.4e-13 78.2 44 86.4
BcaB02g10852 Brassica carinata HOM05D004686 ORTHO05D001378 7.8e-12 74.3 44 79.5
BcaB03g16327 Brassica carinata HOM05D002341 ORTHO05D039489 7.8e-12 74.3 56 69.6
arahy.Tifrunner.gnm1.ann1.0744GE Arachis hypogaea HOM05D000145 ORTHO05D000115 8.6e-11 70.9 36 91.7
arahy.Tifrunner.gnm1.ann1.Z3LWFH Arachis hypogaea HOM05D000145 ORTHO05D000115 1.1e-10 70.5 37 89.2
Carub.0162s0001 Capsella rubella HOM05D004686 ORTHO05D005988 3.3e-10 68.9 38 81.6
CSS0011091 Camellia sinensis var. sinensis HOM05D004686 ORTHO05D005988 1.6e-09 66.6 33 93.9
AL3G34930 Arabidopsis lyrata HOM05D004686 ORTHO05D005988 1.5e-07 60.1 28 96.4


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