Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027412 Camellia sinensis var. sinensis HOM05D048598 ORTHO05D000659 1.6e-74 282.7 147 100.0
CSS0043667 Camellia sinensis var. sinensis HOM05D048598 ORTHO05D000659 1.0e-68 263.5 147 95.9
CSS0007921 Camellia sinensis var. sinensis HOM05D000798 ORTHO05D000659 7.2e-43 177.6 103 90.3
Dinv19178 Davidia involucrata HOM05D000798 ORTHO05D000659 5.2e-17 91.7 111 59.5
Lj1A89G64 Lonicera japonica HOM05D000798 ORTHO05D000659 1.3e-12 77.0 101 54.5
Hma1.2p1_0226F.1_g095433 Hydrangea macrophylla HOM05D000798 ORTHO05D000659 5.0e-12 75.1 108 51.9
Rhsim13G0047400 Rhododendron simsii HOM05D000798 ORTHO05D000659 5.0e-12 75.1 115 49.6
Rhsim01G0253700 Rhododendron simsii HOM05D000798 ORTHO05D000659 1.1e-11 73.9 109 51.4
Actinidia23710 Actinidia chinensis HOM05D000798 ORTHO05D000659 1.0e-09 67.4 103 49.5
vmacro02781 Vaccinium macrocarpon HOM05D000798 ORTHO05D000659 1.4e-09 67.0 114 51.8
Ciclev10020691m.g Citrus clementina HOM05D000798 ORTHO05D000659 1.8e-09 66.6 86 46.5
Rhsim01G0253800 Rhododendron simsii HOM05D000798 ORTHO05D000659 1.8e-09 66.6 116 45.7
vmacro14739 Vaccinium macrocarpon HOM05D000798 ORTHO05D000659 2.3e-09 66.2 111 47.7
Cc01_g16760 Coffea canephora HOM05D000798 ORTHO05D000659 2.0e-08 63.2 72 55.6
Nitab4.5_0003020g0030 Nicotiana tabacum HOM05D000798 ORTHO05D000659 2.6e-08 62.8 60 56.7
ClCG09G008790 Citrullus lanatus HOM05D000798 ORTHO05D000659 3.4e-08 62.4 104 44.2
COL.COLO4_15622 Corchorus olitorius HOM05D000798 ORTHO05D000659 5.8e-08 61.6 104 50.0
Nitab4.5_0007846g0020 Nicotiana tabacum HOM05D000798 ORTHO05D000659 5.8e-08 61.6 69 50.7
vmacro14738 Vaccinium macrocarpon HOM05D000798 ORTHO05D000659 5.8e-08 61.6 109 41.3
CAN.G874.3 Capsicum annuum HOM05D000798 ORTHO05D000659 7.5e-08 61.2 88 46.6
DCAR_004735 Daucus carota HOM05D000798 ORTHO05D000659 7.5e-08 61.2 106 45.3
Nitab4.5_0008794g0030 Nicotiana tabacum HOM05D000798 ORTHO05D000659 9.8e-08 60.8 77 48.1
Potri.002G245600 Populus trichocarpa HOM05D000798 ORTHO05D000659 9.8e-08 60.8 110 46.4
Sabra02G0186900 Salix brachista HOM05D000798 ORTHO05D000659 9.8e-08 60.8 109 44.0
Actinidia09469 Actinidia chinensis HOM05D000798 ORTHO05D000659 1.3e-07 60.5 103 45.6
CANSAT01G0709 Cannabis sativa HOM05D000798 ORTHO05D000659 1.3e-07 60.5 109 45.9
CANSAT01G3147 Cannabis sativa HOM05D000798 ORTHO05D000659 1.3e-07 60.5 109 45.9
Cpa.g.sc428.2 Carica papaya HOM05D000798 ORTHO05D000659 1.3e-07 60.5 108 40.7
Gohir.D08G212700 Gossypium hirsutum HOM05D000798 ORTHO05D000659 1.3e-07 60.5 97 43.3
Gorai.004G226800 Gossypium raimondii HOM05D000798 ORTHO05D000659 1.3e-07 60.5 97 43.3
Peaxi162Scf00238g00413 Petunia axillaris HOM05D000798 ORTHO05D000659 1.7e-07 60.1 111 39.6
TPR.G6409 Trifolium pratense HOM05D000798 ORTHO05D000659 2.2e-07 59.7 95 46.3
EL10Ac7g17893 Beta vulgaris HOM05D000798 ORTHO05D000659 2.9e-07 59.3 107 40.2
Gohir.A08G195400 Gossypium hirsutum HOM05D000798 ORTHO05D000659 2.9e-07 59.3 97 43.3
Hma1.2p1_2668F.1_g326540 Hydrangea macrophylla HOM05D000798 ORTHO05D000659 2.9e-07 59.3 59 55.9
Rhsim01G0253900 Rhododendron simsii HOM05D000798 ORTHO05D000659 3.7e-07 58.9 120 42.5
AUR62016551 Chenopodium quinoa HOM05D000798 ORTHO05D000659 4.9e-07 58.5 105 42.9
Gohir.A08G195350 Gossypium hirsutum HOM05D000798 ORTHO05D000659 4.9e-07 58.5 102 41.2
Thecc.01G220800 Theobroma cacao HOM05D000798 ORTHO05D000659 4.9e-07 58.5 102 45.1
Oeu037766.1 Olea europaea HOM05D000798 ORTHO05D000659 6.4e-07 58.2 100 44.0
CsaV3_7G026160 Cucumis sativus L. HOM05D000798 ORTHO05D000659 8.3e-07 57.8 106 41.5
Nitab4.5_0000045g0470 Nicotiana tabacum HOM05D000798 ORTHO05D000659 8.3e-07 57.8 45 64.4
Haze_15030 Corylus avellana HOM05D000798 ORTHO05D000659 1.1e-06 57.4 107 43.9
Lj1g0012401 Lotus japonicus HOM05D000798 ORTHO05D000659 1.1e-06 57.4 96 43.8
Manes.13G049100 Manihot esculenta HOM05D000798 ORTHO05D000659 1.1e-06 57.4 107 43.9
Gohir.D08G212684 Gossypium hirsutum HOM05D000798 ORTHO05D000659 1.4e-06 57.0 102 40.2
Gorai.004G226700 Gossypium raimondii HOM05D000798 ORTHO05D000659 1.4e-06 57.0 102 40.2
Ah.08g214590 Amaranthus hybridus HOM05D000798 ORTHO05D000659 1.9e-06 56.6 104 44.2
Nn1g07950 Nelumbo nucifera HOM05D000798 ORTHO05D000659 1.9e-06 56.6 105 41.9
AUR62001130 Chenopodium quinoa HOM05D000798 ORTHO05D000659 2.4e-06 56.2 99 43.4
Glyma.08G349200 Glycine max HOM05D000798 ORTHO05D000659 2.4e-06 56.2 102 42.2
HanXRQChr01g0015251 Helianthus annuus HOM05D000798 ORTHO05D000659 2.4e-06 56.2 105 39.0
arahy.Tifrunner.gnm1.ann1.YI95N7 Arachis hypogaea HOM05D000798 ORTHO05D000659 3.2e-06 55.8 100 45.0
Cfa004382 Carpinus fangiana HOM05D000798 ORTHO05D000659 3.2e-06 55.8 110 39.1
CDE05G1283 Ceratophyllum demersum HOM05D000798 ORTHO05D000659 3.2e-06 55.8 106 39.6
Duzib211G0367 Durio zibethinus HOM05D000798 ORTHO05D000659 3.2e-06 55.8 98 46.9
Glyma.18G167300 Glycine max HOM05D000798 ORTHO05D000659 3.2e-06 55.8 99 42.4
arahy.Tifrunner.gnm1.ann1.QR9F0J Arachis hypogaea HOM05D000798 ORTHO05D000659 5.4e-06 55.1 106 45.3
BcaC01g03241 Brassica carinata HOM05D000798 ORTHO05D000659 5.4e-06 55.1 105 44.8
C03p54450 Brassica napus HOM05D000798 ORTHO05D000659 5.4e-06 55.1 105 44.8
BolC3t17731H Brassica oleracea HOM05D000798 ORTHO05D000659 5.4e-06 55.1 105 44.8
Duzib211G0005 Durio zibethinus HOM05D000798 ORTHO05D000659 5.4e-06 55.1 98 46.9
Peaxi162Scf00517g00629 Petunia axillaris HOM05D000798 ORTHO05D000659 5.4e-06 55.1 88 43.2
SalBow3G3503 Salvia bowleyana HOM05D000798 ORTHO05D000659 5.4e-06 55.1 53 56.6
MSTRG.17996 Avicennia marina HOM05D000798 ORTHO05D000659 7.0e-06 54.7 90 41.1
Migut.N00629 Erythranthe guttata HOM05D000798 ORTHO05D000659 7.0e-06 54.7 107 43.0
Lsat_1_v5_gn_5_180701 Lactuca sativa HOM05D000798 ORTHO05D000659 7.0e-06 54.7 79 44.3
Atru.chr12.1387 Acer truncatum HOM05D000798 ORTHO05D000659 9.2e-06 54.3 96 41.7
Atru.chr6.1422 Acer truncatum HOM05D000798 ORTHO05D000659 9.2e-06 54.3 96 41.7
ATR0069G043 Amborella trichopoda HOM05D000798 ORTHO05D000659 9.2e-06 54.3 73 47.9
Duzib133G0677 Durio zibethinus HOM05D000798 ORTHO05D000659 9.2e-06 54.3 99 44.4
Gorai.004G059000 Gossypium raimondii HOM05D000798 ORTHO05D000659 9.2e-06 54.3 97 40.2
Lj2A1126T37 Lonicera japonica HOM05D000798 ORTHO05D000659 9.2e-06 54.3 93 45.2


User provided reference genes

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