Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-113 412.5 207 100.0
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.4e-105 385.6 207 94.2
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-101 373.2 211 91.5
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.3e-101 373.2 211 91.5
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-101 372.5 211 91.5
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.5e-99 366.3 213 91.1
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.3e-92 341.3 212 86.3
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 1.6e-88 329.7 211 78.2
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 1.6e-88 329.7 211 78.2
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-87 326.2 194 89.2
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.9e-81 306.2 208 79.3
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 1.6e-80 303.1 203 74.9
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 4.7e-72 275.0 207 67.6
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 6.1e-72 274.6 203 69.5
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 4.4e-70 268.5 205 68.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 2.2e-69 266.2 212 61.3
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 4.8e-69 265.0 206 68.0
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 1.8e-68 263.1 204 66.2
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 3.5e-67 258.8 211 64.0
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.5e-67 258.8 211 62.1
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 7.7e-67 257.7 211 61.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 7.7e-67 257.7 212 63.2
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 1.0e-66 257.3 221 64.3
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.3e-66 256.9 205 63.4
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 3.8e-66 255.4 214 64.5
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 6.5e-66 254.6 211 64.5
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 8.5e-66 254.2 215 66.5
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.1e-65 253.8 211 60.7
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 9.4e-65 250.8 201 66.2
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 2.1e-64 249.6 211 62.6
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 2.1e-64 249.6 205 62.9
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 4.7e-64 248.4 211 59.7
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 1.4e-63 246.9 205 64.4
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.8e-63 246.5 217 60.4
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 2.3e-63 246.1 212 64.2
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 5.2e-63 245.0 203 63.1
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 6.7e-63 244.6 205 63.4
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 8.8e-63 244.2 211 60.7
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 2.6e-62 242.7 211 63.5
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 2.6e-62 242.7 216 60.6
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 5.7e-62 241.5 212 58.0
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.3e-61 240.4 205 61.0
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.3e-61 240.4 200 63.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 2.8e-61 239.2 210 61.4
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.8e-61 239.2 205 61.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.8e-61 239.2 200 63.5
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 3.7e-61 238.8 217 57.1
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 3.7e-61 238.8 217 57.6
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 4.8e-61 238.4 216 61.6
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 1.1e-60 237.3 205 60.5
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.1e-60 237.3 211 60.2
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 1.4e-60 236.9 216 61.6
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 2.4e-60 236.1 217 61.3
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 2.0e-59 233.0 200 61.5
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 5.9e-59 231.5 217 55.8
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 5.9e-59 231.5 217 55.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 8.5e-58 227.6 205 59.0
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 8.5e-58 227.6 211 58.8
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.5e-57 226.1 215 63.3
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 2.5e-57 226.1 211 58.8
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 9.4e-57 224.2 202 59.4
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 2.1e-56 223.0 208 62.0
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 2.7e-56 222.6 211 58.3
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.7e-56 221.9 200 56.0
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 6.1e-56 221.5 217 55.8
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 6.1e-56 221.5 217 55.8
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 8.8e-55 217.6 217 54.4
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.0e-54 216.5 214 56.5
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 7.5e-54 214.5 209 58.9
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 7.5e-54 214.5 205 57.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 4.8e-53 211.8 216 55.1
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 1.4e-52 210.3 218 56.0
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 3.1e-52 209.1 208 53.4
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 7.7e-51 204.5 207 57.0
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 1.7e-50 203.4 208 52.4
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 3.3e-49 199.1 212 55.7
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 4.2e-49 198.7 208 51.9
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.6e-48 196.8 210 51.4
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.8e-48 196.1 218 50.0
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 6.1e-48 194.9 212 50.9
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 1.4e-47 193.7 207 53.1
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 2.3e-47 193.0 223 51.1
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.4e-46 189.1 209 51.7
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 1.1e-44 184.1 213 48.4
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 5.4e-44 181.8 208 48.6
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 9.2e-44 181.0 210 53.8
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 3.5e-43 179.1 211 49.8
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 3.5e-43 179.1 215 50.2
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 4.5e-43 178.7 217 49.8
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 1.3e-42 177.2 211 50.7
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 3.8e-42 175.6 211 50.7
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 3.8e-42 175.6 211 50.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 1.9e-41 173.3 211 49.8
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 5.6e-41 171.8 211 49.3
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 7.3e-41 171.4 217 47.5
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 1.2e-40 170.6 218 47.7
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.6e-40 170.2 217 47.5
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 2.8e-40 169.5 217 47.0
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 4.7e-40 168.7 210 50.5
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 4.7e-40 168.7 225 45.8
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.0e-39 167.5 216 47.2
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.0e-39 166.0 225 46.2
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 5.2e-39 165.2 172 55.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.8e-31 140.2 105 66.7
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 7.5e-30 134.8 90 76.7
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 1.9e-28 130.2 210 38.6
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 2.7e-27 126.3 216 36.6
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 5.1e-26 122.1 207 34.8
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.7e-19 99.8 199 37.2
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 4.3e-17 92.4 178 37.6
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.6e-16 90.5 208 35.6
QL93p0107_0059 Quercus lobata HOM05D006038 ORTHO05D007547 6.2e-08 62.0 56 57.1


User provided reference genes

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