Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027408 Camellia sinensis var. sinensis HOM05D053810 ORTHO05D033866 4.2e-22 107.1 52 100.0
CSS0030808 Camellia sinensis var. sinensis HOM05D001808 ORTHO05D033866 1.1e-17 92.4 50 88.0
CSS0012815 Camellia sinensis var. sinensis HOM05D001808 ORTHO05D033866 3.1e-17 90.9 47 91.5
FAN08G3030 Fragaria x ananassa HOM05D001808 ORTHO05D001747 1.4e-09 65.5 46 67.4
Dinv09798 Davidia involucrata HOM05D001808 ORTHO05D001747 3.1e-09 64.3 47 63.8
RcHm_v2.0_Chr7g0185361 Rosa chinensis HOM05D001808 ORTHO05D001747 5.4e-09 63.5 46 67.4
FAN04G0848 Fragaria x ananassa HOM05D001808 ORTHO05D001747 7.0e-09 63.2 46 65.2
Duzib084G0243 Durio zibethinus HOM05D001808 ORTHO05D001747 1.6e-08 62.0 46 60.9
FvH4_5g12220 Fragaria vesca HOM05D001808 ORTHO05D001747 1.6e-08 62.0 46 63.0
CiPaw.15G130100 Carya illinoinensis HOM05D001808 ORTHO05D001747 3.5e-08 60.8 46 60.9
COL.COLO4_05973 Corchorus olitorius HOM05D001808 ORTHO05D001747 3.5e-08 60.8 49 57.1
MD06G1215700 Malus domestica HOM05D001808 ORTHO05D001747 4.5e-08 60.5 46 63.0
TAR622G1100 Trochodendron aralioides HOM05D001808 ORTHO05D001747 4.5e-08 60.5 47 57.4
FAN18G2764 Fragaria x ananassa HOM05D001808 ORTHO05D001747 7.7e-08 59.7 46 60.9
Prupe.5G220900 Prunus persica HOM05D001808 ORTHO05D001747 1.7e-07 58.5 45 62.2
QL10p025230 Quercus lobata HOM05D001808 ORTHO05D001747 1.7e-07 58.5 46 60.9
Lj5P148T18 Lonicera japonica HOM05D001808 ORTHO05D001747 2.2e-07 58.2 47 57.4
Nn3g17827 Nelumbo nucifera HOM05D001808 ORTHO05D001747 2.9e-07 57.8 47 57.4
Thecc.03G034500 Theobroma cacao HOM05D001808 ORTHO05D001747 2.9e-07 57.8 46 63.0
Glyma.08G041000 Glycine max HOM05D001808 ORTHO05D001747 3.8e-07 57.4 46 58.7
Atru.chr9.836 Acer truncatum HOM05D001808 ORTHO05D001747 6.5e-07 56.6 47 53.2
Manes.05G137700 Manihot esculenta HOM05D001808 ORTHO05D001747 1.1e-06 55.8 46 58.7
Phvul.002G316000 Phaseolus vulgaris HOM05D001808 ORTHO05D001747 1.1e-06 55.8 46 56.5
arahy.Tifrunner.gnm1.ann1.FZ18G1 Arachis hypogaea HOM05D001808 ORTHO05D001747 1.5e-06 55.5 47 57.4
arahy.Tifrunner.gnm1.ann1.ZH37XF Arachis hypogaea HOM05D001808 ORTHO05D001747 1.5e-06 55.5 47 55.3
GSVIVG01008279001 Vitis vinifera HOM05D001808 ORTHO05D001747 1.5e-06 55.5 47 57.4
Lj4g0019706 Lotus japonicus HOM05D001808 ORTHO05D001747 5.5e-06 53.5 46 50.0
CSS0034055 Camellia sinensis var. sinensis HOM05D053810 ORTHO05D111981 7.2e-06 53.1 47 57.4
VMungo0251G3693 Vigna mungo HOM05D001808 ORTHO05D001747 9.5e-06 52.8 46 52.2


User provided reference genes

Program Settings