Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.8e-52 208.4 109 100.0
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 1.8e-51 205.7 109 99.1
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.8e-44 181.8 109 89.9
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.2e-18 96.7 75 73.3
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 3.5e-18 95.1 74 73.0
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.6e-15 86.3 83 61.4
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 3.6e-15 85.1 75 68.0
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.8e-14 82.8 63 76.2
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 2.0e-10 69.3 75 56.0
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.7e-10 68.9 74 55.4
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 7.8e-10 67.4 91 52.7
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 5.0e-09 64.7 70 55.7
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 1.1e-08 63.5 75 50.7
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 9.5e-08 60.5 73 45.2
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.6e-07 59.7 66 56.1
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.6e-07 59.7 74 50.0
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 3.6e-07 58.5 67 56.7
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 3.1e-06 55.5 73 49.3
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 8.9e-06 53.9 84 46.4
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 8.9e-06 53.9 84 46.4
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 8.9e-06 53.9 84 46.4


User provided reference genes

Program Settings