Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027353 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 6.1e-235 817.0 386 100.0
CSS0024213 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 6.6e-120 434.9 364 59.3
CSS0012204 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 2.5e-119 433.0 364 59.3
CSS0010561 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 1.0e-96 357.8 361 51.5
CSS0012002 Camellia sinensis var. sinensis HOM05D013255 ORTHO05D011422 4.6e-81 305.8 364 45.3
FvH4_4g30830 Fragaria vesca HOM05D010144 ORTHO05D011422 3.9e-48 196.4 381 35.4
FAN17G0220 Fragaria x ananassa HOM05D010144 ORTHO05D011422 8.5e-35 152.1 338 32.0
FvH4_4g30861 Fragaria vesca HOM05D010144 ORTHO05D011422 5.5e-34 149.4 348 32.2
FAN17G0905 Fragaria x ananassa HOM05D010144 ORTHO05D011422 7.2e-34 149.1 385 30.6
FvH4_4g30880 Fragaria vesca HOM05D010144 ORTHO05D011422 3.0e-32 143.7 329 31.3
Actinidia10958 Actinidia chinensis HOM05D013255 ORTHO05D011422 8.8e-32 142.1 246 35.8
Prupe.5G157900 Prunus persica HOM05D013255 ORTHO05D011422 9.7e-31 138.7 379 30.1
FvH4_4g30870 Fragaria vesca HOM05D010144 ORTHO05D011422 2.2e-27 127.5 331 30.8
DCAR_025514 Daucus carota HOM05D013255 ORTHO05D011422 8.0e-25 119.0 370 28.6
FvH4_6g44333 Fragaria vesca HOM05D010144 ORTHO05D011422 1.4e-21 108.2 312 31.7
FvH4_4g30890 Fragaria vesca HOM05D010144 ORTHO05D011422 3.1e-21 107.1 342 30.1
FAN14G1842 Fragaria x ananassa HOM05D010144 ORTHO05D011422 4.1e-21 106.7 254 34.3
FAN05G1166 Fragaria x ananassa HOM05D010144 ORTHO05D011422 3.8e-19 100.1 295 30.8
Lj5P564T10 Lonicera japonica HOM05D012292 ORTHO05D012234 1.2e-15 88.6 251 27.1
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 2.0e-15 87.8 251 30.3
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 2.6e-15 87.4 251 30.3
FvH4_3g40701 Fragaria vesca HOM05D010144 ORTHO05D011422 2.4e-13 80.9 397 24.7
Lj5C265T4 Lonicera japonica HOM05D012292 ORTHO05D012234 2.4e-13 80.9 243 29.6
FAN17G3053 Fragaria x ananassa HOM05D010144 ORTHO05D011422 9.1e-13 79.0 254 30.7
MD15G1401000 Malus domestica HOM05D013255 ORTHO05D011422 9.1e-13 79.0 263 28.5
FvH4_6g44331 Fragaria vesca HOM05D010144 ORTHO05D011422 1.0e-11 75.5 215 29.8
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 5.0e-11 73.2 196 24.5
PGR031G0854 Punica granatum HOM05D023452 ORTHO05D019051 6.6e-11 72.8 149 36.9
QL07p010955 Quercus lobata HOM05D011274 ORTHO05D012136 8.6e-11 72.4 181 29.8
PGR031G1460 Punica granatum HOM05D023452 ORTHO05D019051 1.1e-10 72.0 150 36.7
Lju3917C0T2 Lonicera japonica HOM05D012292 ORTHO05D012234 2.8e-09 67.4 220 26.8
FAN02G2802 Fragaria x ananassa HOM05D010144 ORTHO05D011422 3.6e-09 67.0 312 26.0
Dinv24217 Davidia involucrata HOM05D003963 ORTHO05D004558 6.1e-09 66.2 168 27.4
FAN11G0612 Fragaria x ananassa HOM05D010144 ORTHO05D011422 1.0e-08 65.5 210 28.6
Lj5C264T6 Lonicera japonica HOM05D012292 ORTHO05D012234 1.0e-08 65.5 202 26.7
Lju3917C0T1 Lonicera japonica HOM05D012292 ORTHO05D012234 1.4e-08 65.1 292 23.3
QL07p010851 Quercus lobata HOM05D011274 ORTHO05D012136 1.4e-08 65.1 177 29.4
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 1.8e-08 64.7 177 29.4
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 2.3e-08 64.3 132 31.8
PGR044G2517 Punica granatum HOM05D023452 ORTHO05D019051 3.0e-08 63.9 200 29.5
Glyma.14G130850 Glycine max HOM05D053378 ORTHO05D046700 6.8e-08 62.8 262 30.5
AUR62032965 Chenopodium quinoa HOM05D037678 ORTHO05D012136 8.9e-08 62.4 146 30.8
Ah.09g227600 Amaranthus hybridus HOM05D037678 ORTHO05D012136 2.0e-07 61.2 146 30.1
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 2.0e-07 61.2 126 34.9
QL07p010661 Quercus lobata HOM05D011274 ORTHO05D012136 2.0e-07 61.2 177 28.8
QL10p018154 Quercus lobata HOM05D011274 ORTHO05D012136 4.4e-07 60.1 187 29.4
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 5.7e-07 59.7 130 33.8
Lj5A253T37 Lonicera japonica HOM05D012292 ORTHO05D012234 9.8e-07 58.9 294 25.2
PGR031G1231 Punica granatum HOM05D023452 ORTHO05D019051 9.8e-07 58.9 152 34.2
Rhsim02G0162400 Rhododendron simsii HOM05D015811 ORTHO05D014676 9.8e-07 58.9 303 24.1
Prupe.5G008800 Prunus persica HOM05D013255 ORTHO05D011422 2.2e-06 57.8 110 31.8
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-06 57.4 276 22.1
Lj2g0002624 Lotus japonicus HOM05D053378 ORTHO05D046700 3.7e-06 57.0 123 33.3
Rhsim02G0162000 Rhododendron simsii HOM05D015811 ORTHO05D014676 3.7e-06 57.0 209 26.3
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 6.3e-06 56.2 148 30.4


User provided reference genes

Program Settings