Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027348 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 3.6e-64 248.1 122 100.0
CSS0030749 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 1.8e-63 245.7 122 99.2
CSS0013199 Camellia sinensis var. sinensis HOM05D005227 ORTHO05D006379 1.2e-32 143.3 104 73.1
Dinv26307 Davidia involucrata HOM05D005227 ORTHO05D006379 7.6e-30 134.0 104 68.3
Nn7g38372 Nelumbo nucifera HOM05D005227 ORTHO05D006379 7.6e-30 134.0 106 66.0
Dinv32750 Davidia involucrata HOM05D005227 ORTHO05D006379 9.9e-30 133.7 104 68.3
CsaV3_1G010070 Cucumis sativus L. HOM05D005227 ORTHO05D006379 1.3e-29 133.3 116 62.1
Haze_05241 Corylus avellana HOM05D005227 ORTHO05D006379 1.7e-29 132.9 104 67.3
MELO3C002397.2 Cucumis melo HOM05D005227 ORTHO05D006379 2.2e-29 132.5 114 62.3
QL08p045548 Quercus lobata HOM05D005227 ORTHO05D006379 2.2e-29 132.5 107 65.4
CAN.G585.8 Capsicum annuum HOM05D005227 ORTHO05D006379 3.8e-29 131.7 104 66.3
Cc09_g04960 Coffea canephora HOM05D005227 ORTHO05D006379 6.4e-29 131.0 121 58.7
Cpa.g.c40334 Carica papaya HOM05D005227 ORTHO05D006379 8.4e-29 130.6 105 65.7
Cfa001143 Carpinus fangiana HOM05D005227 ORTHO05D006379 8.4e-29 130.6 104 66.3
TAR627G1207 Trochodendron aralioides HOM05D005227 ORTHO05D006379 8.4e-29 130.6 104 66.3
GSVIVG01012160001 Vitis vinifera HOM05D005227 ORTHO05D006379 8.4e-29 130.6 102 69.6
CiPaw.09G138800 Carya illinoinensis HOM05D005227 ORTHO05D006379 1.1e-28 130.2 104 65.4
QL07p000144 Quercus lobata HOM05D005227 ORTHO05D006379 1.1e-28 130.2 104 65.4
Actinidia33652 Actinidia chinensis HOM05D005227 ORTHO05D006379 1.9e-28 129.4 104 66.3
Thecc.03G046200 Theobroma cacao HOM05D005227 ORTHO05D006379 1.9e-28 129.4 104 66.3
Peaxi162Scf00890g00011 Petunia axillaris HOM05D005227 ORTHO05D006379 2.4e-28 129.0 103 66.0
Sed0019581 Sechium edule HOM05D005227 ORTHO05D006379 2.4e-28 129.0 105 64.8
Migut.D00502 Erythranthe guttata HOM05D005227 ORTHO05D006379 3.2e-28 128.6 103 66.0
Lalb_Chr10g0097141 Lupinus albus HOM05D005227 ORTHO05D006379 3.2e-28 128.6 105 65.7
SalBow2G2250 Salvia bowleyana HOM05D005227 ORTHO05D006379 4.2e-28 128.3 109 60.6
PGSC0003DMG400031097 Solanum tuberosum HOM05D005227 ORTHO05D006379 4.2e-28 128.3 104 65.4
Atru.chr8.505 Acer truncatum HOM05D005227 ORTHO05D006379 5.4e-28 127.9 105 63.8
ClCG03G004140 Citrullus lanatus HOM05D005227 ORTHO05D006379 5.4e-28 127.9 105 64.8
Nitab4.5_0000743g0160 Nicotiana tabacum HOM05D005227 ORTHO05D006379 7.1e-28 127.5 104 65.4
Prupe.1G101300 Prunus persica HOM05D005227 ORTHO05D006379 7.1e-28 127.5 104 64.4
PGR004G2312 Punica granatum HOM05D005227 ORTHO05D006379 7.1e-28 127.5 102 66.7
THA.LOC104806226 Tarenaya hassleriana HOM05D005227 ORTHO05D006379 7.1e-28 127.5 107 62.6
Manes.03G071400 Manihot esculenta HOM05D005227 ORTHO05D006379 9.3e-28 127.1 107 63.6
Peaxi162Scf00254g00421 Petunia axillaris HOM05D005227 ORTHO05D006379 9.3e-28 127.1 101 66.3
TWI81G0571 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 9.3e-28 127.1 104 66.3
MSTRG.21442 Avicennia marina HOM05D005227 ORTHO05D006379 1.6e-27 126.3 104 65.4
Sopen07g029430 Solanum pennellii HOM05D005227 ORTHO05D006379 1.6e-27 126.3 104 64.4
ATR0752G166 Amborella trichopoda HOM05D005227 ORTHO05D006379 2.1e-27 125.9 105 62.9
PGR142G0063 Punica granatum HOM05D005227 ORTHO05D006379 2.1e-27 125.9 102 66.7
AL8G14830 Arabidopsis lyrata HOM05D005227 ORTHO05D006379 2.7e-27 125.6 105 63.8
Gohir.A11G165700 Gossypium hirsutum HOM05D005227 ORTHO05D006379 2.7e-27 125.6 104 64.4
AT5G44710 Arabidopsis thaliana HOM05D005227 ORTHO05D006379 3.5e-27 125.2 105 63.8
Duzib084G1247 Durio zibethinus HOM05D005227 ORTHO05D006379 3.5e-27 125.2 104 62.5
Solyc07g056070.2 Solanum lycopersicum HOM05D005227 ORTHO05D006379 3.5e-27 125.2 104 63.5
Gohir.D11G171900 Gossypium hirsutum HOM05D005227 ORTHO05D006379 4.6e-27 124.8 104 63.5
Gorai.007G184300 Gossypium raimondii HOM05D005227 ORTHO05D006379 4.6e-27 124.8 104 63.5
COL.COLO4_36891 Corchorus olitorius HOM05D005227 ORTHO05D006379 7.8e-27 124.0 104 64.4
BcaC06g31592 Brassica carinata HOM05D005227 ORTHO05D006379 1.0e-26 123.6 105 63.8
BcaC06g31593 Brassica carinata HOM05D005227 ORTHO05D006379 1.0e-26 123.6 105 63.8
unitig_8.g3748 Utricularia gibba HOM05D005227 ORTHO05D006379 1.0e-26 123.6 104 61.5
Ciclev10017275m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.3e-26 123.2 107 62.6
Duzib205G0364 Durio zibethinus HOM05D005227 ORTHO05D006379 1.3e-26 123.2 108 60.2
Sed0010668 Sechium edule HOM05D005227 ORTHO05D006379 1.3e-26 123.2 105 61.9
Sopen07g027180 Solanum pennellii HOM05D005227 ORTHO05D006379 1.3e-26 123.2 104 61.5
PGSC0003DMG401020444 Solanum tuberosum HOM05D005227 ORTHO05D006379 1.3e-26 123.2 104 61.5
BcaB07g30501 Brassica carinata HOM05D005227 ORTHO05D006379 1.7e-26 122.9 105 63.8
C07p27610 Brassica napus HOM05D005227 ORTHO05D006379 1.7e-26 122.9 110 60.0
Carub.0001s3436 Capsella rubella HOM05D005227 ORTHO05D006379 1.7e-26 122.9 105 62.9
Cfa001148 Carpinus fangiana HOM05D005227 ORTHO05D006379 1.7e-26 122.9 104 62.5
Solyc07g055030.1 Solanum lycopersicum HOM05D005227 ORTHO05D006379 1.7e-26 122.9 104 61.5
Atru.chr9.939 Acer truncatum HOM05D005227 ORTHO05D006379 2.3e-26 122.5 103 63.1
BcaC03g16691 Brassica carinata HOM05D005227 ORTHO05D006379 2.3e-26 122.5 116 59.5
A02p28550 Brassica napus HOM05D005227 ORTHO05D006379 2.3e-26 122.5 105 63.8
BolC2t10561H Brassica oleracea HOM05D005227 ORTHO05D006379 2.3e-26 122.5 105 63.8
BolC7t43294H Brassica oleracea HOM05D003109 ORTHO05D003578 2.3e-26 122.5 109 59.6
BraA02t07892Z Brassica rapa HOM05D005227 ORTHO05D006379 2.3e-26 122.5 105 63.8
TWI15G1171 Tripterygium wilfordii HOM05D005227 ORTHO05D006379 2.3e-26 122.5 104 62.5
Thhalv10001080m.g Eutrema salsugineum HOM05D005227 ORTHO05D006379 3.0e-26 122.1 105 61.9
Lalb_Chr17g0339811 Lupinus albus HOM05D005227 ORTHO05D006379 3.0e-26 122.1 105 61.0
SGA_v2.0_scaffold1G00678 Striga asiatica HOM05D005227 ORTHO05D006379 3.0e-26 122.1 107 59.8
Glyma.07G072800 Glycine max HOM05D005227 ORTHO05D006379 3.9e-26 121.7 105 61.9
Aqoxy1G01370 Aquilegia oxysepala HOM05D005227 ORTHO05D006379 5.1e-26 121.3 102 64.7
BraA06t27572Z Brassica rapa HOM05D005227 ORTHO05D006379 6.6e-26 120.9 110 60.9
Carub.0008s0355 Capsella rubella HOM05D005227 ORTHO05D006379 6.6e-26 120.9 106 61.3
CARHR178190 Cardamine hirsuta HOM05D005227 ORTHO05D006379 6.6e-26 120.9 104 62.5
BcaC06g34520 Brassica carinata HOM05D005227 ORTHO05D006379 8.7e-26 120.6 105 61.9
HanXRQChr01g0006241 Helianthus annuus HOM05D005227 ORTHO05D006379 8.7e-26 120.6 105 61.9
MD05G1245000 Malus domestica HOM05D005227 ORTHO05D006379 8.7e-26 120.6 98 66.3
MD10G1226300 Malus domestica HOM05D005227 ORTHO05D006379 8.7e-26 120.6 98 65.3
Potri.003G155000 Populus trichocarpa HOM05D005227 ORTHO05D006379 1.1e-25 120.2 103 63.1
arahy.Tifrunner.gnm1.ann1.59GI1K Arachis hypogaea HOM05D005227 ORTHO05D006379 1.5e-25 119.8 104 62.5
arahy.Tifrunner.gnm1.ann1.GL2DWM Arachis hypogaea HOM05D005227 ORTHO05D006379 1.5e-25 119.8 104 62.5
Phvul.010G097600 Phaseolus vulgaris HOM05D005227 ORTHO05D006379 1.5e-25 119.8 103 63.1
Sabra03G0112200 Salix brachista HOM05D005861 ORTHO05D007151 1.5e-25 119.8 103 62.1
Sp2g09520 Schrenkiella parvula HOM05D005227 ORTHO05D006379 1.5e-25 119.8 105 61.0
BcaB07g30937 Brassica carinata HOM05D005227 ORTHO05D006379 2.5e-25 119.0 105 61.9
Glyma.03G013100 Glycine max HOM05D005227 ORTHO05D006379 2.5e-25 119.0 105 61.0
Eucgr.D00008 Eucalyptus grandis HOM05D005227 ORTHO05D006379 3.3e-25 118.6 104 58.7
HanXRQChr01g0006251 Helianthus annuus HOM05D005227 ORTHO05D006379 3.3e-25 118.6 101 63.4
Rhsim13G0134700 Rhododendron simsii HOM05D005227 ORTHO05D006379 4.3e-25 118.2 97 63.9
RhsimUnG0177600 Rhododendron simsii HOM05D005227 ORTHO05D006379 4.3e-25 118.2 97 63.9
Lsat_1_v5_gn_5_150700 Lactuca sativa HOM05D005227 ORTHO05D006379 5.6e-25 117.9 103 63.1
ECA248G3549 Erigeron canadensis HOM05D005227 ORTHO05D006379 7.3e-25 117.5 105 61.9
A09p21240 Brassica napus HOM05D005227 ORTHO05D006379 9.6e-25 117.1 105 61.0
BraA09t37729Z Brassica rapa HOM05D005227 ORTHO05D006379 9.6e-25 117.1 105 61.0
Nitab4.5_0001904g0080 Nicotiana tabacum HOM05D005227 ORTHO05D006379 9.6e-25 117.1 104 61.5
CANSAT21G1070 Cannabis sativa HOM05D005227 ORTHO05D006379 2.1e-24 115.9 102 59.8
Ciclev10010372m.g Citrus clementina HOM05D005227 ORTHO05D006379 2.1e-24 115.9 107 59.8
CDE05G2352 Ceratophyllum demersum HOM05D005227 ORTHO05D006379 3.6e-24 115.2 100 62.0
arahy.Tifrunner.gnm1.ann1.BUN8CC Arachis hypogaea HOM05D005227 ORTHO05D006379 4.8e-24 114.8 104 60.6
EL10Ac4g09705 Beta vulgaris HOM05D005227 ORTHO05D006379 4.8e-24 114.8 104 60.6
Oeu041343.1 Olea europaea HOM05D005227 ORTHO05D006379 4.8e-24 114.8 102 59.8
RcHm_v2.0_Chr3g0492041 Rosa chinensis HOM05D005227 ORTHO05D006379 6.2e-24 114.4 103 59.2
HPP92_006340 Vanilla planifolia HOM05D005227 ORTHO05D006379 6.2e-24 114.4 103 61.2
Aa31LG9G8450 Aethionema arabicum HOM05D003109 ORTHO05D003578 8.1e-24 114.0 102 57.8
RcHm_v2.0_Chr5g0021361 Rosa chinensis HOM05D005227 ORTHO05D006379 8.1e-24 114.0 102 59.8
FAN21G2110 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.4e-23 113.2 101 60.4
Sc15g0005680 Simmondsia chinensis HOM05D005227 ORTHO05D006379 1.8e-23 112.8 101 57.4
Lj3g0019179 Lotus japonicus HOM05D005227 ORTHO05D006379 2.4e-23 112.5 105 59.0
TPR.G1285 Trifolium pratense HOM05D005227 ORTHO05D006379 3.1e-23 112.1 102 58.8
FvH4_3g13100 Fragaria vesca HOM05D005227 ORTHO05D006379 4.0e-23 111.7 101 59.4
FAN11G3694 Fragaria x ananassa HOM05D005227 ORTHO05D006379 4.0e-23 111.7 101 59.4
FAN16G1292 Fragaria x ananassa HOM05D005227 ORTHO05D006379 4.0e-23 111.7 101 59.4
PSO832G3358 Papaver somniferum HOM05D005227 ORTHO05D006379 5.3e-23 111.3 103 59.2
Glyma.03G084100 Glycine max HOM05D005227 ORTHO05D006379 6.9e-23 110.9 103 59.2
TPR.G4382 Trifolium pratense HOM05D005227 ORTHO05D006379 6.9e-23 110.9 102 58.8
Medtr8g031320 Medicago truncatula HOM05D005227 ORTHO05D006379 1.2e-22 110.2 105 57.1
PSO198G0154 Papaver somniferum HOM05D005227 ORTHO05D006379 1.5e-22 109.8 103 58.3
PSO541G1361 Papaver somniferum HOM05D005227 ORTHO05D006379 2.6e-22 109.0 103 58.3
AUR62042297 Chenopodium quinoa HOM05D005227 ORTHO05D006379 3.4e-22 108.6 103 55.3
Os05g0148300 Oryza sativa ssp. japonica HOM05D005227 ORTHO05D006379 5.8e-22 107.8 104 54.8
PSO541G0222 Papaver somniferum HOM05D005227 ORTHO05D006379 1.3e-21 106.7 103 58.3
PSO675G1867 Papaver somniferum HOM05D005227 ORTHO05D006379 1.3e-21 106.7 103 58.3
Zm00001eb354280 Zea mays HOM05D005227 ORTHO05D006379 1.3e-21 106.7 107 53.3
Dinv26329 Davidia involucrata HOM05D005227 ORTHO05D006379 7.1e-20 100.9 60 75.0
DCAR_003751 Daucus carota HOM05D005861 ORTHO05D007151 1.0e-18 97.1 65 67.7
CDE02G3990 Ceratophyllum demersum HOM05D001323 ORTHO05D001223 7.3e-17 90.9 59 69.5
AUR62035552 Chenopodium quinoa HOM05D005227 ORTHO05D006379 3.6e-16 88.6 66 62.1
Ca_23647_v3 Cicer arietinum L. HOM05D005227 ORTHO05D006379 3.6e-16 88.6 61 67.2
Ah.06g187780 Amaranthus hybridus HOM05D005227 ORTHO05D006379 8.1e-16 87.4 156 38.5
VMungo0859G0001 Vigna mungo HOM05D005227 ORTHO05D006379 1.1e-15 87.0 59 67.8
Psat4g202600 Pisum sativum HOM05D005227 ORTHO05D006379 4.0e-15 85.1 60 65.0
Psat0s277g0080 Pisum sativum HOM05D005227 ORTHO05D006379 5.3e-15 84.7 60 63.3
arahy.Tifrunner.gnm1.ann1.RE1YA1 Arachis hypogaea HOM05D005227 ORTHO05D006379 4.5e-14 81.6 60 61.7
AUR62040506 Chenopodium quinoa HOM05D005227 ORTHO05D006379 9.9e-14 80.5 59 57.6
BcaC04g21823 Brassica carinata HOM05D005227 ORTHO05D006379 3.8e-13 78.6 105 45.7
Ciclev10006880m.g Citrus clementina HOM05D005227 ORTHO05D006379 1.4e-12 76.6 102 48.0
Pp3c15_4210 Physcomitrium patens HOM05D005227 ORTHO05D006379 5.4e-12 74.7 129 40.3
AagrBONN_evm.TU.Sc2ySwM_228.4328 Anthoceros agrestis HOM05D005227 ORTHO05D006379 2.1e-11 72.8 91 48.4
FAN25G2025 Fragaria x ananassa HOM05D005227 ORTHO05D006379 1.8e-10 69.7 89 47.2
Lsat_1_v5_gn_4_103780 Lactuca sativa HOM05D005227 ORTHO05D006379 2.3e-10 69.3 59 52.5
C02p45310 Brassica napus HOM05D005227 ORTHO05D006379 1.9e-09 66.2 66 59.1
Mapoly0090s0044 Marchantia polymorpha HOM05D005227 ORTHO05D006379 4.8e-08 61.6 82 40.2
HPP92_027864 Vanilla planifolia HOM05D005227 ORTHO05D006379 1.1e-07 60.5 34 73.5


User provided reference genes

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