Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027317 Camellia sinensis var. sinensis HOM05D000460 ORTHO05D108883 2.9e-72 275.4 166 100.0
CSS0029330 Camellia sinensis var. sinensis HOM05D000460 ORTHO05D111802 2.8e-51 205.7 193 66.3
CSS0038953 Camellia sinensis var. sinensis HOM05D000460 ORTHO05D110263 3.5e-38 162.2 193 58.0
FvH4_6g12780 Fragaria vesca HOM05D000460 ORTHO05D000333 5.0e-08 62.0 37 81.1
FAN14G5339 Fragaria x ananassa HOM05D000460 ORTHO05D000333 5.0e-08 62.0 37 81.1
RcHm_v2.0_Chr3g0464771 Rosa chinensis HOM05D000460 ORTHO05D000333 5.0e-08 62.0 37 81.1
Dinv37123 Davidia involucrata HOM05D000460 ORTHO05D000333 6.5e-08 61.6 38 78.9
BcaC08g44652 Brassica carinata HOM05D000460 ORTHO05D000333 8.5e-08 61.2 58 58.6
C06p21710 Brassica napus HOM05D000460 ORTHO05D000333 8.5e-08 61.2 58 58.6
BolC6t37359H Brassica oleracea HOM05D000460 ORTHO05D000333 8.5e-08 61.2 58 58.6
BcaB02g07760 Brassica carinata HOM05D000460 ORTHO05D000333 1.1e-07 60.8 58 58.6
A07p21850 Brassica napus HOM05D000460 ORTHO05D000333 1.1e-07 60.8 58 58.6
BraA07t29867Z Brassica rapa HOM05D000460 ORTHO05D000333 1.1e-07 60.8 58 58.6
MELO3C009219.2 Cucumis melo HOM05D000460 ORTHO05D000333 1.1e-07 60.8 37 78.4
CsaV3_3G034480 Cucumis sativus L. HOM05D000460 ORTHO05D000333 1.1e-07 60.8 37 78.4
Actinidia13820 Actinidia chinensis HOM05D000460 ORTHO05D000333 1.9e-07 60.1 38 76.3
DCAR_028781 Daucus carota HOM05D000460 ORTHO05D000333 1.9e-07 60.1 37 78.4
Lsat_1_v5_gn_9_29660 Lactuca sativa HOM05D000460 ORTHO05D000333 1.9e-07 60.1 36 80.6
Lj3g0015419 Lotus japonicus HOM05D000460 ORTHO05D000333 1.9e-07 60.1 45 68.9
Cpa.g.sc56.57 Carica papaya HOM05D000460 ORTHO05D000333 2.5e-07 59.7 41 73.2
Ca_03063_v3 Cicer arietinum L. HOM05D000460 ORTHO05D000333 2.5e-07 59.7 44 68.2
Ciclev10011448m.g Citrus clementina HOM05D000460 ORTHO05D000333 2.5e-07 59.7 47 63.8
FAN02G0428 Fragaria x ananassa HOM05D000460 ORTHO05D000333 2.5e-07 59.7 37 75.7
Thhalv10010914m.g Eutrema salsugineum HOM05D000460 ORTHO05D000333 3.2e-07 59.3 50 62.0
CANSAT35G0740 Cannabis sativa HOM05D000460 ORTHO05D000333 4.2e-07 58.9 38 76.3
CARHR163850 Cardamine hirsuta HOM05D000460 ORTHO05D000333 4.2e-07 58.9 58 56.9
Haze_20876 Corylus avellana HOM05D000460 ORTHO05D000333 4.2e-07 58.9 38 73.7
Manes.08G081500 Manihot esculenta HOM05D000460 ORTHO05D000333 4.2e-07 58.9 37 78.4
Cfa017306 Carpinus fangiana HOM05D000460 ORTHO05D000333 5.5e-07 58.5 38 73.7
ClCG10G021530 Citrullus lanatus HOM05D000460 ORTHO05D000333 5.5e-07 58.5 37 78.4
MD04G1138400 Malus domestica HOM05D000460 ORTHO05D000333 5.5e-07 58.5 36 77.8
QL07p028414 Quercus lobata HOM05D000460 ORTHO05D000333 5.5e-07 58.5 38 73.7
AL5G34930 Arabidopsis lyrata HOM05D000460 ORTHO05D000333 7.2e-07 58.2 38 73.7
Psat7g241600 Pisum sativum HOM05D000460 ORTHO05D000333 7.2e-07 58.2 37 75.7
Sed0013849 Sechium edule HOM05D000460 ORTHO05D000333 7.2e-07 58.2 45 66.7
CiPaw.10G149000 Carya illinoinensis HOM05D000460 ORTHO05D000333 9.4e-07 57.8 38 71.1
Glyma.01G104800 Glycine max HOM05D000460 ORTHO05D000333 9.4e-07 57.8 44 68.2
Glyma.03G071700 Glycine max HOM05D000460 ORTHO05D000333 9.4e-07 57.8 44 68.2
Nitab4.5_0009380g0050 Nicotiana tabacum HOM05D000460 ORTHO05D000333 9.4e-07 57.8 37 75.7
Prupe.6G264000 Prunus persica HOM05D000460 ORTHO05D000333 9.4e-07 57.8 36 75.0
THA.LOC104823404 Tarenaya hassleriana HOM05D000460 ORTHO05D000333 9.4e-07 57.8 38 73.7
VMungo0331G0106 Vigna mungo HOM05D000460 ORTHO05D000333 9.4e-07 57.8 44 68.2
Atru.chr8.2083 Acer truncatum HOM05D000460 ORTHO05D000333 1.2e-06 57.4 35 80.0
Duzib128G0394 Durio zibethinus HOM05D000460 ORTHO05D000333 1.2e-06 57.4 44 68.2
Medtr4g019520 Medicago truncatula HOM05D000460 ORTHO05D000333 1.2e-06 57.4 37 75.7
Nitab4.5_0000119g0420 Nicotiana tabacum HOM05D000460 ORTHO05D000333 1.2e-06 57.4 37 75.7
Phvul.L001845 Phaseolus vulgaris HOM05D000460 ORTHO05D000333 1.2e-06 57.4 44 63.6
Carub.0005s2053 Capsella rubella HOM05D000460 ORTHO05D000333 1.6e-06 57.0 38 71.1
CDE02G3831 Ceratophyllum demersum HOM05D000460 ORTHO05D000333 1.6e-06 57.0 38 68.4
HanXRQChr03g0064931 Helianthus annuus HOM05D000460 ORTHO05D000333 1.6e-06 57.0 37 75.7
Thecc.05G029800 Theobroma cacao HOM05D000460 ORTHO05D000333 1.6e-06 57.0 36 77.8
AT3G53950 Arabidopsis thaliana HOM05D000460 ORTHO05D000333 2.1e-06 56.6 38 71.1
Eucgr.B02726 Eucalyptus grandis HOM05D000460 ORTHO05D000333 2.1e-06 56.6 36 77.8
Gohir.A09G152800 Gossypium hirsutum HOM05D000460 ORTHO05D000333 2.1e-06 56.6 36 75.0
Gohir.D09G148600 Gossypium hirsutum HOM05D000460 ORTHO05D000333 2.1e-06 56.6 36 75.0
Gorai.006G169500 Gossypium raimondii HOM05D000460 ORTHO05D000333 2.1e-06 56.6 36 75.0
Potri.016G103400 Populus trichocarpa HOM05D000460 ORTHO05D000333 2.1e-06 56.6 38 68.4
vmacro20192 Vaccinium macrocarpon HOM05D000460 ORTHO05D000333 2.1e-06 56.6 37 73.0
Aa31sc27G10 Aethionema arabicum HOM05D000460 ORTHO05D000333 2.7e-06 56.2 36 72.2
ECA238G4572 Erigeron canadensis HOM05D000460 ORTHO05D000333 2.7e-06 56.2 34 79.4
SalBow5G1838 Salvia bowleyana HOM05D000460 ORTHO05D000333 2.7e-06 56.2 77 46.8
MSTRG.19055 Avicennia marina HOM05D000460 ORTHO05D000333 3.6e-06 55.8 44 65.9
Sabra16G0103200 Salix brachista HOM05D000460 ORTHO05D000333 3.6e-06 55.8 38 68.4
Sp5g08450 Schrenkiella parvula HOM05D000460 ORTHO05D000333 3.6e-06 55.8 38 71.1
CDE09G0482 Ceratophyllum demersum HOM05D000460 ORTHO05D000333 4.7e-06 55.5 38 68.4
COL.COLO4_14704 Corchorus olitorius HOM05D000460 ORTHO05D000333 4.7e-06 55.5 43 67.4
FAN09G2460 Fragaria x ananassa HOM05D000460 ORTHO05D000333 4.7e-06 55.5 37 70.3
MBI05_g02661_MAGBIO Magnolia biondii HOM05D000460 ORTHO05D000333 4.7e-06 55.5 36 72.2
Aqoxy1G00807 Aquilegia oxysepala HOM05D000460 ORTHO05D000333 6.1e-06 55.1 35 74.3
PGR031G1203 Punica granatum HOM05D000460 ORTHO05D000333 6.1e-06 55.1 35 77.1
TWI53G0921 Tripterygium wilfordii HOM05D000460 ORTHO05D000333 6.1e-06 55.1 35 77.1
Duzib093G1952 Durio zibethinus HOM05D000460 ORTHO05D000333 7.9e-06 54.7 35 74.3
PGSC0003DMG400019141 Solanum tuberosum HOM05D000460 ORTHO05D000333 7.9e-06 54.7 37 70.3


User provided reference genes

Program Settings