Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027281 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 2.6e-31 138.3 80 100.0
CSS0004409 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 1.3e-30 136.0 80 98.8
CSS0044618 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 5.1e-19 97.4 92 66.3
Actinidia02004 Actinidia chinensis HOM05D005411 ORTHO05D006463 3.2e-13 78.2 68 72.1
Actinidia14564 Actinidia chinensis HOM05D005411 ORTHO05D006463 7.2e-13 77.0 59 74.6
Dinv38939 Davidia involucrata HOM05D005411 ORTHO05D006463 3.3e-10 68.2 71 56.3
Dinv38942 Davidia involucrata HOM05D005411 ORTHO05D006463 7.5e-10 67.0 71 56.3
CSS0034062 Camellia sinensis var. sinensis HOM05D005411 ORTHO05D006463 9.7e-10 66.6 53 73.6
Rhsim07G0090400 Rhododendron simsii HOM05D005411 ORTHO05D006463 2.2e-09 65.5 68 60.3
vmacro11335 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 6.3e-09 63.9 64 65.6
vmacro22820 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 6.3e-09 63.9 64 65.6
Hma1.2p1_0377F.1_g139290 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.2e-09 63.5 43 79.1
Hma1.2p1_0377F.1_g139300 Hydrangea macrophylla HOM05D005411 ORTHO05D006463 8.2e-09 63.5 43 79.1
vmacro13959 Vaccinium macrocarpon HOM05D005411 ORTHO05D006463 1.8e-08 62.4 68 57.4
MD14G1105400 Malus domestica HOM05D005411 ORTHO05D006463 2.4e-08 62.0 43 76.7
HanXRQChr13g0394241 Helianthus annuus HOM05D005411 ORTHO05D006463 5.3e-08 60.8 48 66.7
MD06G1084200 Malus domestica HOM05D005411 ORTHO05D006463 9.1e-08 60.1 43 74.4
TAR374G0701 Trochodendron aralioides HOM05D005411 ORTHO05D006463 3.5e-07 58.2 69 55.1
Peaxi162Scf00119g00941 Petunia axillaris HOM05D005411 ORTHO05D006463 5.9e-07 57.4 65 47.7
Lalb_Chr09g0332851 Lupinus albus HOM05D005411 ORTHO05D006463 7.7e-07 57.0 56 60.7
Ciclev10022634m.g Citrus clementina HOM05D005411 ORTHO05D006463 1.0e-06 56.6 39 74.4
Cfa012226 Carpinus fangiana HOM05D005411 ORTHO05D006463 1.7e-06 55.8 39 74.4
Lsat_1_v5_gn_6_6580 Lactuca sativa HOM05D005411 ORTHO05D006463 1.7e-06 55.8 86 46.5
CiPaw.11G134900 Carya illinoinensis HOM05D005411 ORTHO05D006463 2.2e-06 55.5 72 50.0
EL10Ac2g04672 Beta vulgaris HOM05D005411 ORTHO05D006463 2.9e-06 55.1 39 69.2
FvH4_5g02510 Fragaria vesca HOM05D005411 ORTHO05D006463 2.9e-06 55.1 38 76.3
FAN18G0348 Fragaria x ananassa HOM05D005411 ORTHO05D006463 2.9e-06 55.1 38 76.3
PGR042G1580 Punica granatum HOM05D005411 ORTHO05D006463 2.9e-06 55.1 47 63.8
GSVIVG01019751001 Vitis vinifera HOM05D005411 ORTHO05D006463 2.9e-06 55.1 75 52.0
Atru.chr9.2185 Acer truncatum HOM05D005411 ORTHO05D006463 3.8e-06 54.7 56 55.4
Eucgr.H02258 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.8e-06 54.7 37 75.7
Eucgr.H02261 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.8e-06 54.7 37 75.7
Eucgr.L02732 Eucalyptus grandis HOM05D005411 ORTHO05D006463 3.8e-06 54.7 37 75.7
AUR62012163 Chenopodium quinoa HOM05D005411 ORTHO05D006463 5.0e-06 54.3 71 47.9
Prupe.5G100600 Prunus persica HOM05D005411 ORTHO05D006463 5.0e-06 54.3 73 47.9
COL.COLO4_34468 Corchorus olitorius HOM05D005411 ORTHO05D006463 8.5e-06 53.5 54 61.1
FAN13G2772 Fragaria x ananassa HOM05D005411 ORTHO05D006463 8.5e-06 53.5 74 47.3
Nn1g01526 Nelumbo nucifera HOM05D005411 ORTHO05D006463 8.5e-06 53.5 37 67.6
Oeu011043.2 Olea europaea HOM05D005411 ORTHO05D006463 8.5e-06 53.5 53 62.3
Phvul.002G289800 Phaseolus vulgaris HOM05D005411 ORTHO05D006463 8.5e-06 53.5 36 77.8
Potri.001G103800 Populus trichocarpa HOM05D005411 ORTHO05D006463 8.5e-06 53.5 39 69.2
QL12p032900 Quercus lobata HOM05D005411 ORTHO05D006463 8.5e-06 53.5 39 74.4
Solyc08g081130.4 Solanum lycopersicum HOM05D005411 ORTHO05D006463 8.5e-06 53.5 41 68.3
Sopen08g029430 Solanum pennellii HOM05D005411 ORTHO05D006463 8.5e-06 53.5 41 68.3


User provided reference genes

Program Settings