Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027263 Camellia sinensis var. sinensis HOM05D006276 ORTHO05D007724 7.8e-149 530.4 261 100.0
Rhsim07G0142500 Rhododendron simsii HOM05D006276 ORTHO05D007724 1.9e-94 349.7 266 69.2
Actinidia18190 Actinidia chinensis HOM05D006276 ORTHO05D007724 1.8e-92 343.2 260 68.8
Actinidia14712 Actinidia chinensis HOM05D006276 ORTHO05D007724 8.7e-92 340.9 257 70.8
Actinidia01190 Actinidia chinensis HOM05D006276 ORTHO05D007724 4.3e-91 338.6 267 66.3
vmacro14246 Vaccinium macrocarpon HOM05D006276 ORTHO05D007724 1.4e-89 333.6 266 66.5
Dinv27981 Davidia involucrata HOM05D006276 ORTHO05D007724 9.0e-89 330.9 269 65.4
GSVIVG01035412001 Vitis vinifera HOM05D006276 ORTHO05D007724 1.3e-84 317.0 274 60.6
QL02p001268 Quercus lobata HOM05D006276 ORTHO05D007724 7.7e-80 301.2 266 59.8
Hma1.2p1_0482F.1_g162490 Hydrangea macrophylla HOM05D006276 ORTHO05D007724 2.5e-78 296.2 275 56.7
Cfa017950 Carpinus fangiana HOM05D006276 ORTHO05D007724 4.6e-77 292.0 236 64.4
RcHm_v2.0_Chr6g0290791 Rosa chinensis HOM05D006276 ORTHO05D007724 4.6e-77 292.0 276 59.8
MD08G1060900 Malus domestica HOM05D006276 ORTHO05D007724 1.0e-76 290.8 250 63.2
RcHm_v2.0_Chr6g0310851 Rosa chinensis HOM05D006276 ORTHO05D007724 1.8e-76 290.0 276 60.1
Sabra06G0178200 Salix brachista HOM05D006276 ORTHO05D007724 2.3e-76 289.7 266 58.3
Atru.chr7.1056 Acer truncatum HOM05D006276 ORTHO05D007724 3.0e-76 289.3 278 58.6
CiPaw.16G028900 Carya illinoinensis HOM05D006276 ORTHO05D007724 3.0e-76 289.3 271 57.2
Ciclev10008931m.g Citrus clementina HOM05D006276 ORTHO05D007724 3.0e-76 289.3 275 57.1
Potri.006G230000 Populus trichocarpa HOM05D006276 ORTHO05D007724 3.9e-76 288.9 272 57.0
MD15G1060500 Malus domestica HOM05D006276 ORTHO05D007724 6.7e-76 288.1 260 59.2
TAR383G0425 Trochodendron aralioides HOM05D006276 ORTHO05D007724 1.4e-73 280.4 285 54.4
Manes.16G079900 Manihot esculenta HOM05D006276 ORTHO05D007724 1.8e-73 280.0 297 53.5
TAR626G0576 Trochodendron aralioides HOM05D006276 ORTHO05D007724 6.9e-73 278.1 275 53.5
Lj7A273T8 Lonicera japonica HOM05D006276 ORTHO05D007724 9.1e-73 277.7 267 55.8
Cc08_g10550 Coffea canephora HOM05D006276 ORTHO05D007724 4.5e-72 275.4 265 55.5
Eucgr.C03044 Eucalyptus grandis HOM05D006276 ORTHO05D007724 7.7e-72 274.6 275 53.1
DCAR_004430 Daucus carota HOM05D006276 ORTHO05D007724 1.0e-71 274.2 270 53.7
Duzib168G0463 Durio zibethinus HOM05D006276 ORTHO05D007724 1.0e-71 274.2 276 54.3
FvH4_2g31970 Fragaria vesca HOM05D006276 ORTHO05D007724 6.5e-71 271.6 276 56.2
CANSAT25G3436 Cannabis sativa HOM05D006276 ORTHO05D007724 1.4e-70 270.4 272 54.8
COL.COLO4_21052 Corchorus olitorius HOM05D006276 ORTHO05D007724 1.4e-70 270.4 275 52.0
arahy.Tifrunner.gnm1.ann1.C6FL8N Arachis hypogaea HOM05D006276 ORTHO05D007724 4.2e-70 268.9 268 53.4
arahy.Tifrunner.gnm1.ann1.PS3ZFP Arachis hypogaea HOM05D006276 ORTHO05D007724 2.1e-69 266.5 266 53.4
Thecc.09G053300 Theobroma cacao HOM05D006276 ORTHO05D007724 1.0e-68 264.2 282 51.8
Peaxi162Scf00247g00720 Petunia axillaris HOM05D006276 ORTHO05D007724 1.4e-68 263.8 268 53.4
Lalb_Chr14g0367711 Lupinus albus HOM05D006276 ORTHO05D007724 3.0e-68 262.7 280 53.2
PGSC0003DMG400025517 Solanum tuberosum HOM05D006276 ORTHO05D007724 6.7e-68 261.5 269 52.0
Glyma.17G229400 Glycine max HOM05D006276 ORTHO05D007724 4.4e-67 258.8 267 53.6
TPR.G13142 Trifolium pratense HOM05D006276 ORTHO05D007724 1.7e-66 256.9 258 54.3
Solyc11g070020.3 Solanum lycopersicum HOM05D006276 ORTHO05D007724 2.2e-66 256.5 269 50.9
Sopen11g028700 Solanum pennellii HOM05D006276 ORTHO05D007724 2.2e-66 256.5 269 50.9
Lj5g0000642 Lotus japonicus HOM05D006276 ORTHO05D007724 4.8e-66 255.4 259 54.8
Nn3g20166 Nelumbo nucifera HOM05D006276 ORTHO05D007724 4.8e-66 255.4 275 49.1
Nitab4.5_0003550g0010 Nicotiana tabacum HOM05D006276 ORTHO05D007724 4.8e-66 255.4 269 50.6
PSO210G3453 Papaver somniferum HOM05D006276 ORTHO05D007724 8.2e-66 254.6 276 50.7
Ca_13170_v3 Cicer arietinum L. HOM05D006276 ORTHO05D007724 3.1e-65 252.7 258 51.9
PSO210G2260 Papaver somniferum HOM05D006276 ORTHO05D007724 1.2e-64 250.8 274 50.7
Gorai.009G045400 Gossypium raimondii HOM05D006276 ORTHO05D007724 2.0e-64 250.0 276 50.4
THA.LOC104811244 Tarenaya hassleriana HOM05D006276 ORTHO05D007724 2.0e-64 250.0 297 47.1
Sed0014483 Sechium edule HOM05D006276 ORTHO05D007724 2.6e-64 249.6 297 48.5
TWI34G0536 Tripterygium wilfordii HOM05D006276 ORTHO05D007724 3.5e-64 249.2 269 51.3
Lsat_1_v5_gn_3_24381 Lactuca sativa HOM05D006276 ORTHO05D007724 4.5e-64 248.8 265 48.3
Nitab4.5_0001107g0140 Nicotiana tabacum HOM05D006276 ORTHO05D007724 4.5e-64 248.8 269 49.8
MSTRG.11659 Avicennia marina HOM05D006276 ORTHO05D007724 5.9e-64 248.4 267 49.8
Aqoxy5G01259 Aquilegia oxysepala HOM05D006276 ORTHO05D007724 1.3e-63 247.3 274 50.7
CsaV3_2G025580 Cucumis sativus L. HOM05D006276 ORTHO05D007724 2.2e-63 246.5 276 49.6
HanXRQChr17g0538201 Helianthus annuus HOM05D006276 ORTHO05D007724 2.9e-63 246.1 269 46.8
Phvul.001G034700 Phaseolus vulgaris HOM05D006276 ORTHO05D007724 1.9e-62 243.4 268 51.1
Medtr1g016410 Medicago truncatula HOM05D006276 ORTHO05D007724 2.5e-62 243.0 258 50.4
Hund19457 Selenicereus undatus HOM05D006276 ORTHO05D007724 2.5e-62 243.0 272 50.0
FAN24G2654 Fragaria x ananassa HOM05D006276 ORTHO05D007724 7.2e-62 241.5 335 46.0
Sed0008348 Sechium edule HOM05D006276 ORTHO05D007724 7.2e-62 241.5 273 49.8
Cpa.g.sc7.176 Carica papaya HOM05D006276 ORTHO05D007724 9.4e-62 241.1 228 54.4
Haze_18196 Corylus avellana HOM05D006276 ORTHO05D007724 9.4e-62 241.1 273 53.8
Glyma.14G094000 Glycine max HOM05D006276 ORTHO05D007724 1.2e-61 240.7 228 55.7
VMungo0647G0182 Vigna mungo HOM05D006276 ORTHO05D007724 1.2e-61 240.7 268 50.7
SGA_v2.0_scaffold169G38688 Striga asiatica HOM05D006276 ORTHO05D007724 1.6e-61 240.4 274 48.5
ClCG08G017020 Citrullus lanatus HOM05D006276 ORTHO05D007724 4.0e-60 235.7 270 49.3
EL10Ac2g03891 Beta vulgaris HOM05D006276 ORTHO05D007724 8.8e-60 234.6 267 48.7
Migut.E01562 Erythranthe guttata HOM05D006276 ORTHO05D007724 8.8e-60 234.6 265 47.9
SalBow1G4959 Salvia bowleyana HOM05D006276 ORTHO05D007724 4.4e-59 232.3 280 47.5
PSO478G1664 Papaver somniferum HOM05D006276 ORTHO05D007724 1.3e-58 230.7 243 51.0
CiPaw.15G039400 Carya illinoinensis HOM05D006276 ORTHO05D007724 2.2e-58 229.9 223 54.3
AUR62022071 Chenopodium quinoa HOM05D006276 ORTHO05D007724 2.2e-58 229.9 263 48.3
PSO782G4309 Papaver somniferum HOM05D006276 ORTHO05D007724 3.7e-58 229.2 246 52.4
CARHR201350 Cardamine hirsuta HOM05D006276 ORTHO05D007724 7.0e-57 224.9 261 46.4
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 2.7e-56 223.0 389 39.6
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 4.5e-56 222.2 395 39.2
A10p25940 Brassica napus HOM05D006276 ORTHO05D007724 5.9e-56 221.9 265 46.8
BraA10t44656Z Brassica rapa HOM05D006276 ORTHO05D007724 1.0e-55 221.1 266 46.6
Carub.0006s1034 Capsella rubella HOM05D006276 ORTHO05D007724 1.3e-55 220.7 260 46.2
SHI18737 Sapria himalayana HOM05D006276 ORTHO05D007724 5.0e-55 218.8 259 47.5
Thhalv10014178m.g Eutrema salsugineum HOM05D006276 ORTHO05D007724 1.1e-54 217.6 267 46.1
AT5G11810 Arabidopsis thaliana HOM05D006276 ORTHO05D007724 2.5e-54 216.5 267 45.3
A03p05210 Brassica napus HOM05D006276 ORTHO05D007724 2.5e-54 216.5 259 47.5
BraA03t09860Z Brassica rapa HOM05D006276 ORTHO05D007724 3.2e-54 216.1 258 46.9
C09p65020 Brassica napus HOM05D006276 ORTHO05D007724 2.7e-53 213.0 265 46.4
Gohir.D05G044300 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.7e-53 213.0 276 45.3
BolC9t59330H Brassica oleracea HOM05D006276 ORTHO05D007724 3.6e-53 212.6 265 46.0
C03p06010 Brassica napus HOM05D006276 ORTHO05D007724 4.7e-53 212.2 259 47.1
AUR62009155 Chenopodium quinoa HOM05D006276 ORTHO05D007724 8.0e-53 211.5 287 43.2
Sp6g31790 Schrenkiella parvula HOM05D006276 ORTHO05D007724 8.0e-53 211.5 261 46.4
Oeu003983.2 Olea europaea HOM05D006276 ORTHO05D007724 3.0e-52 209.5 271 44.3
BolC3t13112H Brassica oleracea HOM05D006276 ORTHO05D007724 1.2e-51 207.6 259 45.6
BcaC04g19193 Brassica carinata HOM05D006276 ORTHO05D007724 2.6e-51 206.5 267 45.3
CDE06G0120 Ceratophyllum demersum HOM05D006276 ORTHO05D007724 9.8e-51 204.5 278 43.5
AL6G22560 Arabidopsis lyrata HOM05D006276 ORTHO05D007724 4.8e-50 202.2 231 46.3
Aa31LG3G15390 Aethionema arabicum HOM05D006276 ORTHO05D007724 6.3e-50 201.8 263 43.7
CDE04G1132 Ceratophyllum demersum HOM05D000032 ORTHO05D002561 7.0e-49 198.4 277 42.6
HPP92_004831 Vanilla planifolia HOM05D006276 ORTHO05D007724 4.5e-48 195.7 271 44.3
unitig_26.g10141 Utricularia gibba HOM05D003606 ORTHO05D004650 3.2e-46 189.5 221 47.5
Prupe.1G412500 Prunus persica HOM05D006276 ORTHO05D007724 6.1e-45 185.3 203 53.7
Lj7P276T14 Lonicera japonica HOM05D006276 ORTHO05D007724 4.0e-44 182.6 163 56.4
PGR044G2277 Punica granatum HOM05D006276 ORTHO05D007724 4.0e-44 182.6 251 43.8
Sc09g0009760 Simmondsia chinensis HOM05D006276 ORTHO05D007724 4.0e-44 182.6 240 46.2
Os02g0135600 Oryza sativa ssp. japonica HOM05D006276 ORTHO05D007724 5.7e-43 178.7 235 41.3
BcaB01g05452 Brassica carinata HOM05D006276 ORTHO05D007724 7.5e-43 178.3 257 42.0
FAN20G3006 Fragaria x ananassa HOM05D006276 ORTHO05D007724 1.4e-41 174.1 237 47.7
Zm00001eb231620 Zea mays HOM05D006276 ORTHO05D007724 2.0e-40 170.2 235 38.7
MELO3C010755.2 Cucumis melo HOM05D006276 ORTHO05D007724 1.0e-39 167.9 266 40.6
Psat6g020720 Pisum sativum HOM05D006276 ORTHO05D007724 6.1e-37 158.7 196 46.9
Gohir.A05G042600 Gossypium hirsutum HOM05D006276 ORTHO05D007724 2.3e-36 156.8 216 43.5
PSO210G7329 Papaver somniferum HOM05D006276 ORTHO05D007724 3.0e-36 156.4 215 44.2
Ah.10g034420 Amaranthus hybridus HOM05D006276 ORTHO05D007724 5.7e-35 152.1 143 53.8
ATR0564G292 Amborella trichopoda HOM05D006276 ORTHO05D007724 6.4e-34 148.7 250 37.6
AagrBONN_evm.TU.Sc2ySwM_117.3789 Anthoceros agrestis HOM05D006276 ORTHO05D007724 1.4e-33 147.5 284 32.7
SEGI_30057 Sequoiadendron giganteum HOM05D006276 ORTHO05D007724 3.2e-33 146.4 261 35.2
Mapoly0103s0015 Marchantia polymorpha HOM05D006276 ORTHO05D007724 9.2e-33 144.8 267 32.2
Pp3c1_29470 Physcomitrium patens HOM05D006276 ORTHO05D007724 3.1e-28 129.8 274 33.9
SMO117G0325 Selaginella moellendorffii HOM05D006276 ORTHO05D007724 2.2e-26 123.6 251 34.7
Pp3c14_20160 Physcomitrium patens HOM05D006276 ORTHO05D007724 9.2e-25 118.2 255 32.9
Oeu018645.1 Olea europaea HOM05D006276 ORTHO05D007724 6.2e-21 105.5 55 83.6
Thecc.08G113900 Theobroma cacao HOM05D006276 ORTHO05D007724 4.0e-12 76.3 184 33.2


User provided reference genes

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