Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 1.1e-231 806.2 404 100.0
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 2.1e-177 625.9 397 81.1
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 2.1e-177 625.9 396 79.8
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.8e-160 569.7 399 71.9
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 3.3e-146 522.3 401 66.3
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 4.0e-144 515.4 398 66.3
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 2.9e-142 509.2 395 64.6
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 9.2e-141 504.2 392 65.6
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 9.2e-141 504.2 391 63.4
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 4.3e-138 495.4 396 62.9
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 5.6e-138 495.0 397 64.5
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 7.3e-138 494.6 397 62.2
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 3.6e-137 492.3 397 64.5
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 2.4e-136 489.6 395 61.5
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 5.2e-136 488.4 392 63.3
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 1.3e-134 483.8 395 62.8
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 6.4e-134 481.5 402 59.7
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.9e-133 479.9 395 62.8
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 3.2e-133 479.2 392 62.5
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 4.1e-133 478.8 392 60.2
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 5.4e-133 478.4 397 60.2
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 7.1e-133 478.0 402 62.4
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 9.2e-133 477.6 415 60.0
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 1.6e-132 476.9 401 61.1
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 3.5e-132 475.7 393 61.8
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.3e-131 473.8 323 74.3
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 3.0e-131 472.6 393 61.6
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 1.5e-130 470.3 391 62.4
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 2.5e-130 469.5 400 61.5
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 2.8e-129 466.1 391 59.1
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 3.4e-127 459.1 394 59.4
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 3.4e-127 459.1 410 58.0
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 7.6e-127 458.0 389 60.4
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 2.9e-126 456.1 394 60.2
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 3.8e-126 455.7 394 59.9
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 4.9e-126 455.3 394 58.4
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 6.4e-126 454.9 399 58.4
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 1.1e-125 454.1 390 60.3
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 3.2e-125 452.6 400 57.8
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 3.9e-123 445.7 399 56.9
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 5.1e-123 445.3 398 56.8
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 4.3e-122 442.2 390 59.0
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 4.3e-122 442.2 363 61.7
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 5.6e-122 441.8 389 58.9
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 3.6e-121 439.1 393 59.3
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 6.2e-121 438.3 394 58.6
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 3.1e-120 436.0 390 57.7
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 2.6e-119 433.0 349 63.9
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 2.2e-118 429.9 389 57.8
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 3.8e-118 429.1 396 55.6
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 8.4e-118 427.9 386 56.0
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 1.9e-117 426.8 404 55.2
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.4e-117 425.2 359 57.4
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 1.6e-116 423.7 393 55.7
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 2.1e-116 423.3 340 61.5
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 1.0e-115 421.0 397 56.2
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 1.3e-115 420.6 396 55.8
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 1.8e-115 420.2 396 55.8
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 3.9e-115 419.1 392 55.6
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 5.1e-115 418.7 399 54.4
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 8.7e-115 417.9 397 54.2
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 3.3e-114 416.0 396 55.8
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 4.3e-114 415.6 403 53.3
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 4.8e-113 412.1 400 54.5
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 4.8e-113 412.1 390 57.9
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 6.2e-113 411.8 396 54.3
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 8.1e-113 411.4 396 55.6
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 8.1e-113 411.4 394 52.5
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 1.4e-112 410.6 390 54.4
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 2.6e-111 406.4 396 54.0
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 4.5e-111 405.6 396 53.3
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 4.5e-111 405.6 267 75.7
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 9.9e-111 404.4 319 63.9
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 1.7e-110 403.7 396 54.0
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 4.2e-109 399.1 395 55.2
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 1.6e-108 397.1 396 53.3
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 1.6e-108 397.1 426 48.6
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.3e-107 394.0 370 55.4
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 2.3e-107 393.3 402 52.5
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 1.3e-105 387.5 330 57.0
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 8.2e-105 384.8 348 57.5
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.2e-103 380.9 393 52.7
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 5.5e-101 372.1 269 71.7
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 4.3e-98 362.5 292 63.0
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 6.3e-97 358.6 348 54.0
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 8.2e-97 358.2 284 60.9
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 5.3e-96 355.5 315 55.2
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.9e-93 347.1 321 58.9
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 6.1e-92 342.0 294 56.1
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 1.3e-86 324.3 315 53.7
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.8e-80 303.9 301 53.8
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 2.9e-78 296.6 396 44.4
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 5.2e-75 285.8 240 60.8
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.8e-73 280.0 373 42.1
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.6e-55 221.1 239 51.9
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.3e-54 218.0 215 49.8
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 1.3e-54 218.0 235 53.6
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.7e-47 193.7 305 40.7
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 5.6e-45 186.0 203 45.3
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 9.5e-45 185.3 215 46.0
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 1.0e-43 181.8 383 33.4
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 6.4e-41 172.6 288 37.2
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.5e-37 161.4 349 33.8
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 1.5e-34 151.4 237 40.9
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.9e-29 134.4 102 70.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 5.1e-22 109.8 132 41.7
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 1.1e-21 108.6 84 58.3
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 5.4e-16 89.7 102 48.0
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.8e-11 74.7 84 44.0
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 6.9e-11 72.8 92 43.5
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 2.2e-09 67.8 102 38.2


User provided reference genes

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