Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027246 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 6.7e-125 450.7 223 100.0
CSS0029738 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 2.8e-99 365.5 190 98.4
Dinv32181 Davidia involucrata HOM05D004072 ORTHO05D005933 9.4e-87 323.9 190 84.7
Actinidia07470 Actinidia chinensis HOM05D004072 ORTHO05D005933 1.2e-84 317.0 202 79.2
PGR031G0553 Punica granatum HOM05D004072 ORTHO05D005933 3.4e-84 315.5 190 80.0
Atru.chr10.895 Acer truncatum HOM05D004072 ORTHO05D005933 9.8e-84 313.9 202 79.7
MD10G1254200 Malus domestica HOM05D004072 ORTHO05D005933 9.8e-84 313.9 201 78.6
GSVIVG01021613001 Vitis vinifera HOM05D004072 ORTHO05D005933 9.8e-84 313.9 202 77.7
Duzib132G0425 Durio zibethinus HOM05D004072 ORTHO05D005933 1.3e-83 313.5 190 81.1
Nn3g20249 Nelumbo nucifera HOM05D004072 ORTHO05D005933 1.7e-83 313.2 190 82.1
Ciclev10014084m.g Citrus clementina HOM05D004072 ORTHO05D005933 3.7e-83 312.0 190 82.6
Prupe.4G089200 Prunus persica HOM05D004072 ORTHO05D005933 4.8e-83 311.6 202 77.2
CANSAT35G1345 Cannabis sativa HOM05D004072 ORTHO05D005933 1.4e-82 310.1 190 81.6
Thecc.02G012200 Theobroma cacao HOM05D004072 ORTHO05D005933 1.4e-82 310.1 190 81.1
MD05G1274500 Malus domestica HOM05D004072 ORTHO05D005933 2.4e-82 309.3 201 77.1
RcHm_v2.0_Chr5g0015701 Rosa chinensis HOM05D004072 ORTHO05D005933 4.1e-82 308.5 201 76.6
SalBow8G4752 Salvia bowleyana HOM05D004072 ORTHO05D005933 5.4e-82 308.1 194 76.3
QL05p053312 Quercus lobata HOM05D004072 ORTHO05D005933 7.0e-82 307.8 202 77.2
FAN11G0415 Fragaria x ananassa HOM05D004072 ORTHO05D005933 9.1e-82 307.4 201 76.1
FAN25G0515 Fragaria x ananassa HOM05D004072 ORTHO05D005933 1.2e-81 307.0 201 76.1
Manes.14G122228 Manihot esculenta HOM05D004072 ORTHO05D005933 1.2e-81 307.0 189 77.8
Rhsim13G0119900 Rhododendron simsii HOM05D004072 ORTHO05D005933 1.2e-81 307.0 202 76.7
FvH4_3g09950 Fragaria vesca HOM05D004072 ORTHO05D005933 1.6e-81 306.6 201 76.1
Cc09_g08230 Coffea canephora HOM05D004072 ORTHO05D005933 2.7e-81 305.8 189 79.4
Nitab4.5_0008398g0020 Nicotiana tabacum HOM05D004072 ORTHO05D005933 2.7e-81 305.8 190 79.5
Migut.M01885 Erythranthe guttata HOM05D004072 ORTHO05D005933 3.5e-81 305.4 204 72.5
FAN21G2972 Fragaria x ananassa HOM05D004072 ORTHO05D005933 3.5e-81 305.4 201 76.1
Lsat_1_v5_gn_7_29400 Lactuca sativa HOM05D004072 ORTHO05D005933 3.5e-81 305.4 192 80.2
Manes.06G055700 Manihot esculenta HOM05D004072 ORTHO05D005933 4.5e-81 305.1 190 80.0
Potri.001G357700 Populus trichocarpa HOM05D004072 ORTHO05D005933 5.9e-81 304.7 189 81.0
MSTRG.16285 Avicennia marina HOM05D004072 ORTHO05D005933 7.7e-81 304.3 192 76.6
FAN16G0609 Fragaria x ananassa HOM05D004072 ORTHO05D005933 7.7e-81 304.3 201 75.6
TAR627G0650 Trochodendron aralioides HOM05D004072 ORTHO05D005933 7.7e-81 304.3 203 74.4
vmacro03398 Vaccinium macrocarpon HOM05D004072 ORTHO05D005933 7.7e-81 304.3 202 76.7
Duzib052G1035 Durio zibethinus HOM05D004072 ORTHO05D005933 1.0e-80 303.9 190 79.5
Lalb_Chr08g0233191 Lupinus albus HOM05D004072 ORTHO05D005933 1.3e-80 303.5 202 75.2
Peaxi162Scf00670g00114 Petunia axillaris HOM05D004072 ORTHO05D005933 1.3e-80 303.5 190 79.5
HanXRQChr04g0119071 Helianthus annuus HOM05D004072 ORTHO05D005933 1.7e-80 303.1 192 78.1
Sabra16G0235400 Salix brachista HOM05D004072 ORTHO05D005933 3.8e-80 302.0 189 80.4
Gorai.002G162800 Gossypium raimondii HOM05D004072 ORTHO05D005933 6.5e-80 301.2 190 79.5
Cpa.g.sc17.85 Carica papaya HOM05D004072 ORTHO05D005933 8.5e-80 300.8 208 73.1
Gohir.A01G139400 Gossypium hirsutum HOM05D004072 ORTHO05D005933 8.5e-80 300.8 190 79.5
Gohir.D01G131100 Gossypium hirsutum HOM05D004072 ORTHO05D005933 8.5e-80 300.8 190 79.5
CiPaw.10G086200 Carya illinoinensis HOM05D004072 ORTHO05D005933 1.1e-79 300.4 202 74.3
MELO3C007083.2 Cucumis melo HOM05D004072 ORTHO05D005933 1.1e-79 300.4 190 77.4
CsaV3_6G052280 Cucumis sativus L. HOM05D004072 ORTHO05D005933 1.1e-79 300.4 190 77.4
Oeu040089.1 Olea europaea HOM05D004072 ORTHO05D005933 1.1e-79 300.4 192 77.1
CAN.G660.42 Capsicum annuum HOM05D004072 ORTHO05D005933 1.5e-79 300.1 190 77.4
CiPaw.09G116100 Carya illinoinensis HOM05D004072 ORTHO05D005933 1.5e-79 300.1 202 75.2
Solyc02g070260.4 Solanum lycopersicum HOM05D004072 ORTHO05D005933 1.9e-79 299.7 193 75.6
Sopen02g019350 Solanum pennellii HOM05D004072 ORTHO05D005933 1.9e-79 299.7 193 75.6
Potri.011G090200 Populus trichocarpa HOM05D004072 ORTHO05D005933 2.5e-79 299.3 192 79.7
ATR0165G006 Amborella trichopoda HOM05D004072 ORTHO05D005933 7.2e-79 297.7 191 77.0
Eucgr.E02482 Eucalyptus grandis HOM05D004072 ORTHO05D005933 7.2e-79 297.7 189 77.8
TAR626G0585 Trochodendron aralioides HOM05D004072 ORTHO05D005933 7.2e-79 297.7 188 78.2
Glyma.15G192700 Glycine max HOM05D004072 ORTHO05D005933 9.4e-79 297.4 190 78.4
PSO675G3632 Papaver somniferum HOM05D004072 ORTHO05D005933 1.2e-78 297.0 193 75.1
PSO541G2055 Papaver somniferum HOM05D004072 ORTHO05D005933 1.6e-78 296.6 193 74.6
Sed0022754 Sechium edule HOM05D004072 ORTHO05D005933 4.7e-78 295.0 202 73.3
TWI73G0101 Tripterygium wilfordii HOM05D004072 ORTHO05D005933 6.1e-78 294.7 202 72.8
ECA236G2867 Erigeron canadensis HOM05D004072 ORTHO05D005933 8.0e-78 294.3 204 73.0
Glyma.09G084300 Glycine max HOM05D004072 ORTHO05D005933 1.8e-77 293.1 202 72.3
VMungo1309G2749 Vigna mungo HOM05D004072 ORTHO05D005933 3.0e-77 292.4 190 76.3
Ca_02513_v3 Cicer arietinum L. HOM05D004072 ORTHO05D005933 8.8e-77 290.8 190 75.8
Lj6g0006190 Lotus japonicus HOM05D004072 ORTHO05D005933 8.8e-77 290.8 202 73.3
Aqoxy1G01646_Aqoxy1G01645 Aquilegia oxysepala HOM05D004072 ORTHO05D005933 5.7e-76 288.1 189 76.2
AUR62042015 Chenopodium quinoa HOM05D004072 ORTHO05D005933 7.5e-76 287.7 189 75.1
ClCG01G025080 Citrullus lanatus HOM05D004072 ORTHO05D005933 9.8e-76 287.3 215 68.8
Hund21569 Selenicereus undatus HOM05D004072 ORTHO05D005933 1.3e-75 287.0 189 71.4
Nitab4.5_0001181g0040 Nicotiana tabacum HOM05D004072 ORTHO05D005933 1.7e-75 286.6 187 75.9
Phvul.009G217700 Phaseolus vulgaris HOM05D004072 ORTHO05D005933 1.7e-75 286.6 190 75.3
EL10Ac8g19581 Beta vulgaris HOM05D004072 ORTHO05D005933 3.7e-75 285.4 190 71.1
AUR62038603 Chenopodium quinoa HOM05D004072 ORTHO05D005933 6.3e-75 284.6 189 73.0
Psat1g019120 Pisum sativum HOM05D004072 ORTHO05D005933 1.1e-74 283.9 190 75.3
Medtr2g048210 Medicago truncatula HOM05D004072 ORTHO05D005933 2.4e-74 282.7 190 74.7
Ah.14g086190 Amaranthus hybridus HOM05D004072 ORTHO05D005933 3.1e-74 282.3 189 70.4
TPR.G28615 Trifolium pratense HOM05D004072 ORTHO05D005933 4.1e-74 282.0 190 74.7
THA.LOC104798608 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 9.2e-74 280.8 193 71.0
AL4G30670 Arabidopsis lyrata HOM05D004072 ORTHO05D005933 3.5e-73 278.9 189 72.5
A03p19230 Brassica napus HOM05D004072 ORTHO05D005933 4.5e-73 278.5 190 72.6
Sc24g0001460 Simmondsia chinensis HOM05D004072 ORTHO05D005933 4.5e-73 278.5 191 70.2
AT2G34680 Arabidopsis thaliana HOM05D004072 ORTHO05D005933 5.9e-73 278.1 189 72.5
Carub.0004s1637 Capsella rubella HOM05D004072 ORTHO05D005933 7.7e-73 277.7 189 72.0
SGA_v2.0_scaffold223G42858 Striga asiatica HOM05D004072 ORTHO05D005933 7.7e-73 277.7 240 59.2
BraA03t11178Z Brassica rapa HOM05D004072 ORTHO05D005933 1.0e-72 277.3 190 72.1
THA.LOC104813323 Tarenaya hassleriana HOM05D004072 ORTHO05D005933 1.3e-72 276.9 190 70.5
arahy.Tifrunner.gnm1.ann1.39P5NE Arachis hypogaea HOM05D004072 ORTHO05D005933 1.5e-71 273.5 208 70.2
CARHR128800 Cardamine hirsuta HOM05D004072 ORTHO05D005933 1.9e-71 273.1 193 69.4
BolC3t14626H Brassica oleracea HOM05D004072 ORTHO05D005933 2.5e-71 272.7 191 70.7
Sp4g16960 Schrenkiella parvula HOM05D004072 ORTHO05D005933 2.5e-71 272.7 189 70.4
Thhalv10016130m.g Eutrema salsugineum HOM05D004072 ORTHO05D005933 3.3e-71 272.3 189 71.4
C03p22430 Brassica napus HOM05D004072 ORTHO05D005933 5.6e-71 271.6 191 70.2
BcaC01g05784 Brassica carinata HOM05D004072 ORTHO05D005933 1.0e-69 267.3 198 68.2
Aa31LG10G6650 Aethionema arabicum HOM05D004072 ORTHO05D005933 1.4e-69 266.9 189 69.3
Lj1C1164T5 Lonicera japonica HOM05D004072 ORTHO05D005933 4.4e-68 261.9 170 79.4
HPP92_001000 Vanilla planifolia HOM05D004072 ORTHO05D005933 6.4e-67 258.1 189 64.6
Zm00001eb299970 Zea mays HOM05D004072 ORTHO05D005933 2.4e-66 256.1 186 66.1
CDE02G4494 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 1.5e-63 246.9 164 73.2
SEGI_16447 Sequoiadendron giganteum HOM05D004072 ORTHO05D005933 2.1e-62 243.0 190 61.6
arahy.Tifrunner.gnm1.ann1.WCP5HM Arachis hypogaea HOM05D004072 ORTHO05D005933 3.6e-62 242.3 201 65.7
DCAR_003864 Daucus carota HOM05D004072 ORTHO05D005933 1.1e-55 220.7 149 73.8
COL.COLO4_17682 Corchorus olitorius HOM05D004072 ORTHO05D005933 1.1e-53 214.2 230 52.6
Pp3c17_7410 Physcomitrium patens HOM05D004072 ORTHO05D005933 3.7e-51 205.7 190 53.7
SMO271G0077 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 2.4e-50 203.0 189 53.4
Mapoly0023s0068 Marchantia polymorpha HOM05D004072 ORTHO05D005933 4.1e-50 202.2 190 53.7
Pp3c14_11530 Physcomitrium patens HOM05D004072 ORTHO05D005933 9.2e-50 201.1 190 52.6
HPP92_000967 Vanilla planifolia HOM05D004072 ORTHO05D005933 1.9e-47 193.4 169 60.4
SMO308G0046 Selaginella moellendorffii HOM05D004072 ORTHO05D005933 6.2e-46 188.3 188 51.6
CBR_g51063 Chara braunii HOM05D004072 ORTHO05D005933 5.8e-44 181.8 192 46.4
Medtr8g464200 Medicago truncatula HOM05D004072 ORTHO05D005933 1.7e-43 180.3 162 58.6
Medtr3g010273 Medicago truncatula HOM05D004072 ORTHO05D005933 2.7e-25 119.8 95 66.3
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 3.9e-16 89.4 102 44.1
SalBow5G4417 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.6e-09 67.4 98 37.8
Lsat_1_v5_gn_5_73260 Lactuca sativa HOM05D000371 ORTHO05D006177 1.3e-08 64.3 60 53.3
Lj1A1163T37 Lonicera japonica HOM05D004072 ORTHO05D019491 1.3e-08 64.3 84 39.3
CDE02G3068 Ceratophyllum demersum HOM05D004072 ORTHO05D005933 1.5e-07 60.8 141 29.1
TAR626G0996 Trochodendron aralioides HOM05D004072 ORTHO05D005933 5.7e-07 58.9 148 29.1
CSS0044654 Camellia sinensis var. sinensis HOM05D004072 ORTHO05D005933 7.4e-07 58.5 141 29.1
Os07g0148800 Oryza sativa ssp. japonica HOM05D004072 ORTHO05D005933 7.4e-07 58.5 138 26.8
Cpa.g.sc17.88 Carica papaya HOM05D004072 ORTHO05D005933 3.7e-06 56.2 138 28.3


User provided reference genes

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