Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027245 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-36 156.0 80 100.0
CSS0023479 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 4.8e-33 144.1 80 92.5
CSS0025010 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 4.8e-33 144.1 80 92.5
CSS0033375 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-30 136.0 74 94.6
CSS0042777 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.7e-30 135.6 77 90.9
CSS0014554 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.2e-30 135.2 77 89.6
CSS0000410 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-28 129.4 70 94.3
CSS0026637 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-28 129.4 74 89.2
CSS0030164 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.2e-28 129.4 77 85.7
CSS0025827 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.1e-28 128.6 77 85.7
CSS0014469 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.7e-27 123.6 74 85.1
CSS0007342 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 5.7e-26 120.6 74 83.8
CSS0001225 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.3e-25 119.4 72 84.7
CSS0025076 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 1.7e-25 119.0 74 82.4
CSS0017223 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.1e-24 114.4 67 91.0
CSS0037680 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.3e-18 94.7 59 79.7
CSS0012123 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 2.0e-15 85.5 51 84.3
CSS0002884 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 78 51.3
CSS0021854 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 74 52.7
CSS0021996 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.2e-14 82.0 78 51.3
CSS0029449 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.2e-14 82.0 78 51.3
CSS0003101 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-14 81.6 78 51.3
CSS0019890 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-14 81.6 78 51.3
CSS0047776 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.9e-14 81.6 78 51.3
CSS0032716 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.0e-14 80.9 78 50.0
CSS0017003 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-14 80.5 78 50.0
CSS0033949 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-14 80.5 72 52.8
CSS0044817 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-14 80.5 72 52.8
CSS0038181 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.1e-13 79.7 78 48.7
CSS0006373 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-13 79.3 71 52.1
CSS0036987 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.5e-13 79.3 78 47.4
CSS0008327 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.9e-13 79.0 78 50.0
CSS0025145 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 1.9e-13 79.0 77 51.9
CSS0000008 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-13 78.6 73 52.1
CSS0012883 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-13 78.6 70 51.4
CSS0033606 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.5e-13 78.6 78 48.7
CSS0022421 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 3.2e-13 78.2 78 47.4
Rhsim06G0042800 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.2e-13 78.2 78 50.0
RhsimUnG0175100 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.2e-13 78.2 78 50.0
CSS0045951 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.5e-13 77.4 78 47.4
CSS0006141 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 4.7e-12 74.3 47 78.7
Rhsim06G0131400 Rhododendron simsii HOM05D011308 ORTHO05D000224 4.7e-12 74.3 78 46.2
CSS0039855 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.1e-12 73.9 72 50.0
FvH4_3g35241 Fragaria vesca HOM05D000004 ORTHO05D000002 6.1e-12 73.9 65 53.8
CSS0000254 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-12 73.6 78 51.3
CSS0011436 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000224 8.0e-12 73.6 72 47.2
CSS0034226 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-12 73.6 78 51.3
CSS0047664 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.0e-12 73.6 78 51.3
CSS0015860 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.4e-11 72.8 65 56.9
CSS0048163 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 2.3e-11 72.0 72 48.6
CSS0030801 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 3.0e-11 71.6 46 78.3
CSS0043796 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 5.2e-11 70.9 67 52.2
CSS0039137 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000034 6.7e-11 70.5 72 48.6
Rhsim02G0151000 Rhododendron simsii HOM05D011308 ORTHO05D000224 6.7e-11 70.5 78 47.4
CSS0033175 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 8.8e-11 70.1 65 53.8
PSO339G4168 Papaver somniferum HOM05D000004 ORTHO05D000224 8.8e-11 70.1 80 43.8
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 8.8e-11 70.1 76 47.4
Rhsim06G0119500 Rhododendron simsii HOM05D011308 ORTHO05D000224 8.8e-11 70.1 78 44.9
Atru.chr6.581 Acer truncatum HOM05D000004 ORTHO05D000002 2.0e-10 68.9 77 42.9
Atru.chr9.42 Acer truncatum HOM05D000004 ORTHO05D000002 2.0e-10 68.9 77 42.9
Rhsim06G0088500 Rhododendron simsii HOM05D020422 ORTHO05D000224 4.4e-10 67.8 77 42.9
CSS0035454 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D015543 5.7e-10 67.4 78 46.2
PSO210G6535 Papaver somniferum HOM05D000004 ORTHO05D000224 5.7e-10 67.4 80 42.5
PSO782G2227 Papaver somniferum HOM05D000004 ORTHO05D000034 5.7e-10 67.4 80 42.5
Actinidia34655 Actinidia chinensis HOM05D000004 ORTHO05D000034 7.5e-10 67.0 78 39.7
CSS0004810 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 9.7e-10 66.6 77 44.2
CSS0030156 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 9.7e-10 66.6 69 46.4
PSO210G2852 Papaver somniferum HOM05D000004 ORTHO05D000224 9.7e-10 66.6 80 41.2
Rhsim06G0100400 Rhododendron simsii HOM05D011308 ORTHO05D000224 9.7e-10 66.6 78 43.6
Rhsim05G0059200 Rhododendron simsii HOM05D011494 ORTHO05D000034 1.3e-09 66.2 79 43.0
PSO384G2626 Papaver somniferum HOM05D000004 ORTHO05D000034 1.7e-09 65.9 80 42.5
PSO782G4596 Papaver somniferum HOM05D000004 ORTHO05D000224 1.7e-09 65.9 66 48.5
Rhsim02G0006400 Rhododendron simsii HOM05D020422 ORTHO05D000224 1.7e-09 65.9 77 41.6
PSO210G4059 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-09 65.5 80 41.2
PSO384G2907 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-09 65.5 66 45.5
PSO832G2906 Papaver somniferum HOM05D000004 ORTHO05D000224 2.2e-09 65.5 66 45.5
Rhsim07G0097500 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.8e-09 65.1 58 50.0
PSO017G2690 Papaver somniferum HOM05D000004 ORTHO05D000224 3.7e-09 64.7 66 45.5
PSO063G4683 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-09 64.7 66 45.5
PSO210G5577 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-09 64.7 66 45.5
PSO210G6640 Papaver somniferum HOM05D000004 ORTHO05D000224 3.7e-09 64.7 66 45.5
PSO384G1551 Papaver somniferum HOM05D000004 ORTHO05D000224 3.7e-09 64.7 66 45.5
Rhsim05G0131300 Rhododendron simsii HOM05D000995 ORTHO05D000638 3.7e-09 64.7 78 43.6
Rhsim08G0114800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.7e-09 64.7 78 41.0
RhsimUnG0193500 Rhododendron simsii HOM05D000004 ORTHO05D000224 4.8e-09 64.3 58 50.0
CSS0008415 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.3e-09 63.9 64 46.9
CSS0031723 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 6.3e-09 63.9 64 46.9
PSO063G2494 Papaver somniferum HOM05D000004 ORTHO05D000224 6.3e-09 63.9 66 45.5
PSO384G3678 Papaver somniferum HOM05D000004 ORTHO05D000002 8.2e-09 63.5 66 43.9
Rhsim03G0014100 Rhododendron simsii HOM05D011494 ORTHO05D000034 8.2e-09 63.5 77 45.5
Rhsim05G0110500 Rhododendron simsii HOM05D000004 ORTHO05D000002 8.2e-09 63.5 66 47.0
Rhsim08G0139100 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.2e-09 63.5 58 50.0
Rhsim10G0110100 Rhododendron simsii HOM05D011308 ORTHO05D000034 8.2e-09 63.5 78 43.6
PSO013G0187 Papaver somniferum HOM05D000004 ORTHO05D000224 1.1e-08 63.2 66 43.9
PSO013G0379 Papaver somniferum HOM05D000004 ORTHO05D000224 1.1e-08 63.2 80 40.0
CSS0002509 Camellia sinensis var. sinensis HOM05D002151 ORTHO05D002142 2.4e-08 62.0 69 43.5
Rhsim07G0098600 Rhododendron simsii HOM05D000375 ORTHO05D000224 2.4e-08 62.0 58 48.3
Rhsim07G0155000 Rhododendron simsii HOM05D011494 ORTHO05D016144 4.1e-08 61.2 61 47.5
CSS0000878 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 5.3e-08 60.8 73 45.2
Hma1.2p1_0073F.1_g038590 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.3e-08 60.8 78 41.0
Hma1.2p1_1680F.1_g297180 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 5.3e-08 60.8 78 41.0
Hma1.2p1_2793F.1_g328630 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 5.3e-08 60.8 78 41.0
THA.LOC104815204 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 5.3e-08 60.8 79 34.2
Hma1.2p1_0032F.1_g019000 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 7.0e-08 60.5 78 41.0
MBI01_g37335_MAGBIO Magnolia biondii HOM05D009540 ORTHO05D000034 7.0e-08 60.5 65 46.2
PSO591G0107 Papaver somniferum HOM05D000004 ORTHO05D000034 7.0e-08 60.5 66 42.4
CSS0037169 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 9.1e-08 60.1 56 51.8
Oeu036689.1 Olea europaea HOM05D009054 ORTHO05D000034 9.1e-08 60.1 58 48.3
Oeu060138.1 Olea europaea HOM05D000004 ORTHO05D000224 9.1e-08 60.1 58 48.3
RhsimUnG0157800 Rhododendron simsii HOM05D000004 ORTHO05D000224 9.1e-08 60.1 69 43.5
CSS0012449 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 1.2e-07 59.7 65 44.6
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 1.2e-07 59.7 58 48.3
Oeu061981.1 Olea europaea HOM05D009054 ORTHO05D000034 1.2e-07 59.7 58 48.3
PSO170G5394 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-07 59.7 63 42.9
FvH4_4g06575 Fragaria vesca HOM05D000004 ORTHO05D000002 1.6e-07 59.3 63 44.4
Rhsim11G0020300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.6e-07 59.3 69 43.5
CSS0013170 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.0e-07 58.9 75 44.0
CSS0033607 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 2.0e-07 58.9 75 44.0
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 2.0e-07 58.9 69 46.4
Rhsim10G0111100 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.0e-07 58.9 78 34.6
Rhsim10G0111300 Rhododendron simsii HOM05D000004 ORTHO05D000224 2.0e-07 58.9 78 34.6
Rhsim10G0127900 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.0e-07 58.9 78 39.7
SHI48849 Sapria himalayana HOM05D000004 ORTHO05D000002 2.0e-07 58.9 77 41.6
CSS0007018 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000224 2.7e-07 58.5 64 45.3
FvH4_5g25163 Fragaria vesca HOM05D000004 ORTHO05D000224 2.7e-07 58.5 63 46.0
Hma1.2p1_0038F.1_g024310 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 2.7e-07 58.5 63 42.9
Hma1.2p1_0209F.1_g088450 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 3.5e-07 58.2 78 38.5
Oeu061602.1 Olea europaea HOM05D009054 ORTHO05D000034 3.5e-07 58.2 58 46.6
RcHm_v2.0_Chr5g0019091 Rosa chinensis HOM05D000004 ORTHO05D000034 3.5e-07 58.2 65 41.5
THA.LOC109117280 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.5e-07 58.2 76 35.5
Hma1.2p1_0344F.1_g131150 Hydrangea macrophylla HOM05D000004 ORTHO05D000224 4.5e-07 57.8 78 39.7
THA.LOC104807088 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 4.5e-07 57.8 76 35.5
Rhsim07G0101500 Rhododendron simsii HOM05D000004 ORTHO05D000224 5.9e-07 57.4 78 33.3
SHI46790 Sapria himalayana HOM05D000004 ORTHO05D000224 5.9e-07 57.4 77 40.3
CSS0023953 Camellia sinensis var. sinensis HOM05D011494 ORTHO05D016144 7.7e-07 57.0 58 48.3
Ca_24325_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.7e-07 57.0 71 40.8
Manes.12G054904 Manihot esculenta HOM05D000004 ORTHO05D000034 7.7e-07 57.0 78 39.7
Rhsim06G0111500 Rhododendron simsii HOM05D000002 ORTHO05D000047 7.7e-07 57.0 77 33.8
Rhsim08G0057000 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.7e-07 57.0 77 33.8
Rhsim11G0030500 Rhododendron simsii HOM05D000004 ORTHO05D000224 7.7e-07 57.0 56 46.4
THA.LOC109116329 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 7.7e-07 57.0 76 32.9
Rhsim05G0170300 Rhododendron simsii HOM05D000111 ORTHO05D000134 1.0e-06 56.6 77 36.4
Rhsim11G0091100 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.0e-06 56.6 62 43.5
Oeu053343.1 Olea europaea HOM05D009054 ORTHO05D000034 1.3e-06 56.2 58 46.6
Rhsim03G0184300 Rhododendron simsii HOM05D000004 ORTHO05D000224 1.3e-06 56.2 78 32.1
Rhsim10G0111000 Rhododendron simsii HOM05D000004 ORTHO05D000034 1.3e-06 56.2 78 32.1
vmacro23521 Vaccinium macrocarpon HOM05D000157 ORTHO05D016144 1.3e-06 56.2 76 39.5
THA.LOC104800026 Tarenaya hassleriana HOM05D000004 ORTHO05D000034 1.7e-06 55.8 66 39.4
Oeu046677.1 Olea europaea HOM05D000004 ORTHO05D000224 2.2e-06 55.5 58 46.6
TWI63G1549 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 2.2e-06 55.5 79 35.4
Oeu003531.1 Olea europaea HOM05D009054 ORTHO05D000034 2.9e-06 55.1 54 48.1
PSO478G0812 Papaver somniferum HOM05D000004 ORTHO05D000224 2.9e-06 55.1 61 41.0
Rhsim09G0059300 Rhododendron simsii HOM05D011308 ORTHO05D000034 2.9e-06 55.1 78 33.3
FvH4_6g27413 Fragaria vesca HOM05D000004 ORTHO05D000224 3.8e-06 54.7 63 41.3
Oeu036411.1 Olea europaea HOM05D009054 ORTHO05D000034 3.8e-06 54.7 57 45.6
Haze_01589 Corylus avellana HOM05D014948 ORTHO05D000034 5.0e-06 54.3 79 38.0
Haze_04663 Corylus avellana HOM05D014948 ORTHO05D000034 5.0e-06 54.3 66 37.9
Rhsim05G0135900 Rhododendron simsii HOM05D011308 ORTHO05D000034 5.0e-06 54.3 78 33.3
CSS0002976 Camellia sinensis var. sinensis HOM05D009540 ORTHO05D000034 6.5e-06 53.9 39 69.2
CSS0040223 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 6.5e-06 53.9 76 35.5
Dinv24672 Davidia involucrata HOM05D009540 ORTHO05D000034 6.5e-06 53.9 58 44.8
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 6.5e-06 53.9 64 40.6
Manes.06G180001 Manihot esculenta HOM05D000004 ORTHO05D000034 8.5e-06 53.5 79 40.5
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 8.5e-06 53.5 77 35.1
TWI79G1342 Tripterygium wilfordii HOM05D000004 ORTHO05D000034 8.5e-06 53.5 84 38.1


User provided reference genes

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