Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 5.4e-300 1033.5 495 100.0
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 5.9e-299 1030.0 495 99.6
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.1e-268 929.5 495 88.9
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 6.6e-266 920.2 495 88.3
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 9.6e-257 889.8 576 76.2
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 1.3e-250 869.4 496 83.1
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 2.3e-250 868.6 496 82.9
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 2.1e-248 862.1 495 82.2
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 7.6e-246 853.6 495 81.6
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 2.2e-245 852.0 495 81.8
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 2.9e-245 851.7 495 81.8
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 1.4e-244 849.4 495 80.2
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 1.9e-244 849.0 495 80.2
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 9.3e-244 846.7 495 80.4
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 4.6e-243 844.3 495 80.2
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 4.6e-243 844.3 499 80.8
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 2.3e-242 842.0 496 80.2
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 2.3e-242 842.0 495 79.6
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 1.1e-241 839.7 495 80.0
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.1e-241 839.7 495 80.0
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.5e-241 838.6 495 80.2
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.3e-241 838.2 496 80.6
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 5.6e-241 837.4 495 79.2
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 5.6e-241 837.4 495 80.4
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 5.6e-241 837.4 495 79.6
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 5.6e-241 837.4 531 75.5
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 9.6e-241 836.6 495 79.4
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 1.6e-240 835.9 495 77.8
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.1e-239 833.2 496 79.4
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 1.4e-239 832.8 510 78.8
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.4e-239 832.0 495 79.0
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 3.1e-239 831.6 495 79.6
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 4.0e-239 831.2 495 78.8
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.3e-239 830.9 495 79.0
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 9.0e-239 830.1 495 78.8
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 3.4e-238 828.2 496 79.0
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.3e-237 826.2 495 78.0
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 1.7e-237 825.9 496 78.8
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 1.7e-237 825.9 495 78.8
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 2.2e-237 825.5 495 78.0
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 2.2e-237 825.5 495 77.8
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 4.9e-237 824.3 495 78.8
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 8.4e-237 823.5 495 77.8
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 8.4e-237 823.5 498 77.9
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.9e-236 822.4 495 78.2
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.6e-235 819.3 495 78.8
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 3.5e-235 818.1 495 77.8
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 1.0e-234 816.6 496 78.0
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 2.3e-234 815.5 495 78.2
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 3.9e-234 814.7 520 75.8
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 5.1e-234 814.3 496 77.8
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 6.7e-234 813.9 495 78.2
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 8.7e-234 813.5 495 78.0
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 8.7e-234 813.5 481 79.4
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 4.3e-233 811.2 495 76.6
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 7.4e-233 810.4 496 77.8
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 9.6e-233 810.1 496 77.8
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 9.6e-233 810.1 496 78.4
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 9.6e-233 810.1 495 77.8
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 2.1e-232 808.9 495 77.6
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 1.1e-231 806.6 495 76.0
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 1.4e-231 806.2 497 75.7
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 3.1e-231 805.1 472 80.9
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 1.2e-230 803.1 500 76.8
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 2.0e-230 802.4 484 78.5
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 8.4e-229 797.0 498 76.7
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.5e-228 795.4 497 75.5
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 9.3e-228 793.5 590 66.4
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 3.5e-227 791.6 495 74.9
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 7.9e-227 790.4 495 75.8
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 1.3e-226 789.6 495 75.4
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 1.3e-226 789.6 496 74.8
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 8.7e-226 786.9 484 77.1
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 5.7e-225 784.3 501 74.3
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 1.3e-224 783.1 495 75.2
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 3.1e-223 778.5 499 73.9
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.5e-222 776.2 495 75.4
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 1.7e-221 772.7 579 65.6
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 2.5e-220 768.8 496 72.8
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 3.2e-220 768.5 497 73.8
GSVIVG01029751001 Vitis vinifera HOM05D004862 ORTHO05D005841 1.2e-219 766.5 495 74.7
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 1.0e-218 763.5 495 72.9
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 3.0e-218 761.9 496 72.6
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.5e-217 759.6 495 72.3
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 9.7e-217 756.9 495 71.7
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 4.8e-216 754.6 495 71.9
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 6.3e-216 754.2 495 71.5
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 5.3e-215 751.1 495 71.3
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 5.3e-215 751.1 495 71.1
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 9.1e-215 750.4 495 71.9
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 3.4e-214 748.4 411 84.9
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 5.9e-214 747.7 495 70.5
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 5.9e-214 747.7 495 70.5
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 7.7e-214 747.3 495 71.1
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 1.0e-213 746.9 411 84.7
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 5.0e-213 744.6 495 70.3
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 5.0e-213 744.6 495 70.5
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 6.1e-211 737.6 519 67.8
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.8e-208 728.8 584 62.5
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 1.4e-207 726.5 552 64.9
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 4.1e-207 724.9 495 70.3
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 2.2e-205 719.2 609 59.9
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 1.3e-200 703.4 463 73.4
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 1.4e-199 699.9 504 67.1
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 5.3e-199 698.0 519 65.5
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 8.5e-189 664.1 374 83.7
SEGI_34202 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.6e-187 659.8 444 70.5
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 2.8e-184 649.0 411 73.2
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 1.2e-182 643.7 499 61.5
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 2.0e-182 642.9 360 83.9
SMO115G0021 Selaginella moellendorffii HOM05D004862 ORTHO05D005841 2.9e-181 639.0 500 62.2
HPP92_004639 Vanilla planifolia HOM05D004862 ORTHO05D005841 6.1e-179 631.3 384 76.0
Pp3c13_18080 Physcomitrium patens HOM05D004862 ORTHO05D005841 1.8e-178 629.8 507 58.6
HPP92_004630 Vanilla planifolia HOM05D004862 ORTHO05D005841 3.4e-177 625.5 384 75.5
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 5.6e-172 608.2 327 88.1
TPR.G31479 Trifolium pratense HOM05D004862 ORTHO05D005841 9.8e-169 597.4 353 79.6
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 5.9e-166 588.2 327 84.1
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 5.0e-165 585.1 327 83.8
CBR_g37214 Chara braunii HOM05D004862 ORTHO05D005841 1.2e-163 580.5 531 55.7
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 2.8e-155 552.7 328 79.9
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.6e-147 526.9 333 76.0
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 4.7e-147 525.4 324 76.9
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 1.1e-146 524.2 351 72.9
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 1.8e-146 523.5 360 70.0
CsaV3_7G014980 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.1e-143 511.5 311 77.2
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.9e-132 476.9 327 71.6
CsaV3_UNG189490 Cucumis sativus L. HOM05D004862 ORTHO05D005841 9.7e-108 394.8 222 81.1
MCO05G740 Micromonas commoda HOM05D004862 ORTHO05D005841 1.9e-103 380.6 506 41.3
Cre08.g359100 Chlamydomonas reinhardtii HOM05D004862 ORTHO05D005841 1.2e-102 377.9 384 49.2
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.0e-97 360.5 211 82.0
PRCOL_00003583 Prasinoderma coloniale HOM05D004862 ORTHO05D005841 1.5e-92 344.4 446 43.7
unitig_26.g9584 Utricularia gibba HOM05D004862 ORTHO05D005841 5.7e-92 342.4 243 66.3
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.3e-82 309.3 187 80.2
CsaV3_7G015000 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.0e-80 302.8 159 86.8
CsaV3_UNG187480 Cucumis sativus L. HOM05D004862 ORTHO05D005841 5.0e-80 302.8 159 86.8
CsaV3_7G014960 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.3e-77 293.9 159 85.5
unitig_26.g9585 Utricularia gibba HOM05D004862 ORTHO05D005841 1.2e-68 265.0 145 81.4
Cfa021801 Carpinus fangiana HOM05D004862 ORTHO05D005841 3.5e-57 226.9 381 34.9
CsaV3_UNG197500 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.3e-47 192.6 106 84.0
Ca_31280_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 5.2e-45 186.4 106 81.1
CsaV3_7G014970 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.6e-44 184.1 94 90.4
CsaV3_7G015010 Cucumis sativus L. HOM05D004862 ORTHO05D005841 7.5e-44 182.6 93 90.3
AagrBONN_evm.TU.Sc2ySwM_344.4621 Anthoceros agrestis HOM05D004862 ORTHO05D005841 8.6e-40 169.1 154 51.9
BolC2t11379H Brassica oleracea HOM05D004862 ORTHO05D005841 7.3e-39 166.0 119 69.7
Potri.003G022650 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.7e-35 154.8 91 80.2
Actinidia00239 Actinidia chinensis HOM05D004862 ORTHO05D005841 2.1e-30 137.9 87 75.9
TAR628G0087 Trochodendron aralioides HOM05D004862 ORTHO05D005841 1.4e-26 125.2 77 74.0
Potri.003G022701 Populus trichocarpa HOM05D004862 ORTHO05D005841 9.0e-21 105.9 76 64.5
CsaV3_7G014950 Cucumis sativus L. HOM05D004862 ORTHO05D005841 1.1e-18 99.0 65 66.2
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 9.3e-18 95.9 70 67.1
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.1e-15 89.0 69 65.2
Dinv28090 Davidia involucrata HOM05D000259 ORTHO05D000155 1.3e-14 85.5 122 41.8
MCO05G371 Micromonas commoda HOM05D004862 ORTHO05D267887 1.9e-07 61.6 130 34.6


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