Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.5e-154 548.9 308 100.0
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 3.8e-147 525.0 330 91.5
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.4e-117 426.8 309 78.3
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.2e-109 399.1 321 71.0
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 1.7e-107 393.3 327 70.6
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 2.3e-107 392.9 303 66.7
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.1e-106 390.6 315 72.1
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.6e-103 379.4 319 70.2
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 1.3e-102 377.1 316 71.5
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 1.7e-102 376.7 324 70.1
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 1.7e-102 376.7 302 69.9
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 2.9e-102 375.9 335 66.0
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 4.9e-102 375.2 296 70.9
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 6.4e-102 374.8 300 72.0
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 1.1e-101 374.0 314 67.5
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 1.4e-101 373.6 323 67.5
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 3.2e-101 372.5 309 70.6
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 3.2e-101 372.5 309 70.6
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 9.3e-101 370.9 316 68.0
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 2.1e-100 369.8 321 62.9
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 2.7e-100 369.4 299 70.2
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 4.6e-100 368.6 317 67.5
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 4.6e-100 368.6 314 69.1
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 1.0e-99 367.5 316 70.3
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 1.3e-99 367.1 319 67.1
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 3.9e-99 365.5 316 68.7
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 5.1e-99 365.2 325 67.4
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 5.1e-99 365.2 300 69.3
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 6.7e-99 364.8 309 69.6
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 8.7e-99 364.4 310 69.0
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 1.5e-98 363.6 321 67.3
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 4.3e-98 362.1 403 54.3
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 5.6e-98 361.7 311 68.5
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 7.4e-98 361.3 315 68.6
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 1.1e-96 357.5 334 59.3
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 3.1e-96 355.9 307 71.0
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 1.2e-95 354.0 316 67.7
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 3.4e-95 352.4 326 57.7
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 3.4e-95 352.4 305 66.9
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 5.8e-95 351.7 327 63.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 2.2e-94 349.7 315 63.8
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 2.2e-94 349.7 323 67.2
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 3.8e-94 349.0 305 67.5
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 4.9e-94 348.6 335 61.8
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 4.9e-94 348.6 331 60.1
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.9e-93 346.7 318 62.9
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 3.2e-93 345.9 316 63.9
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.1e-93 344.7 310 66.5
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.2e-92 344.0 313 66.1
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 1.2e-92 344.0 320 65.9
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 1.6e-92 343.6 321 66.4
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 2.1e-92 343.2 319 64.9
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 2.7e-92 342.8 340 63.8
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 2.7e-92 342.8 320 64.7
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 6.0e-92 341.7 308 66.2
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 6.0e-92 341.7 274 68.2
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 6.0e-92 341.7 334 57.8
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 7.9e-92 341.3 292 67.8
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 7.9e-92 341.3 335 54.9
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 1.0e-91 340.9 347 62.2
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 1.0e-91 340.9 306 66.0
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.3e-91 340.5 292 67.5
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 3.9e-91 339.0 318 63.5
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 5.1e-91 338.6 306 65.0
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 5.1e-91 338.6 313 65.2
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 6.7e-91 338.2 305 64.6
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 6.7e-91 338.2 305 64.6
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 8.7e-91 337.8 305 64.3
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 1.9e-90 336.7 296 65.5
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 9.6e-90 334.3 321 62.3
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 6.2e-89 331.6 299 62.5
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 8.2e-89 331.3 304 63.2
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 8.2e-89 331.3 304 63.2
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.1e-88 330.9 306 58.5
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.8e-88 330.1 300 61.3
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 4.0e-88 328.9 341 62.2
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 6.9e-88 328.2 261 74.7
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 9.0e-88 327.8 326 60.1
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 2.0e-87 326.6 292 64.4
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 5.8e-87 325.1 298 62.4
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 5.8e-87 325.1 298 62.4
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 1.0e-86 324.3 310 60.6
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 1.9e-85 320.1 200 80.0
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 1.8e-80 303.5 333 58.0
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.5e-79 300.4 265 67.5
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 5.0e-78 295.4 361 53.2
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 1.4e-77 293.9 295 56.9
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 2.3e-75 286.6 197 74.6
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 6.7e-75 285.0 187 73.8
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 2.0e-74 283.5 247 63.6
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 3.3e-74 282.7 302 52.6
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 4.3e-74 282.3 328 53.0
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 7.4e-74 281.6 302 57.9
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 6.3e-73 278.5 184 72.8
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 6.3e-73 278.5 184 72.8
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 1.1e-72 277.7 318 53.1
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 9.1e-72 274.6 292 59.2
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 8.5e-70 268.1 311 51.4
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 2.3e-67 260.0 342 53.2
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 5.1e-67 258.8 215 70.7
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 2.0e-66 256.9 317 51.4
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 9.1e-64 248.1 237 66.7
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 1.7e-57 227.3 186 58.6
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 4.5e-55 219.2 326 40.2
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 7.2e-53 211.8 188 59.6
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 8.8e-51 204.9 150 66.0
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 6.3e-49 198.7 144 68.1
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 5.3e-48 195.7 305 40.0
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.2e-45 186.4 136 66.2
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 5.2e-43 179.1 310 38.1
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 2.8e-36 156.8 411 34.8
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 2.0e-34 150.6 150 69.3
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 6.4e-25 119.0 122 50.0
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.3e-25 118.6 77 79.2
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 9.2e-24 115.2 74 74.3
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 9.2e-24 115.2 138 49.3
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 1.6e-23 114.4 171 42.7
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 4.6e-23 112.8 345 27.2
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 4.7e-20 102.8 67 80.6
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 3.1e-19 100.1 134 41.8
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 3.4e-18 96.7 57 77.2
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 8.3e-17 92.0 87 62.1
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.3e-14 84.7 66 69.7
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 3.9e-14 83.2 150 38.7
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 3.9e-14 83.2 50 80.0
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.1e-13 81.6 48 83.3
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 3.3e-13 80.1 80 60.0
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 6.8e-11 72.4 45 82.2
Ah.07g199910 Amaranthus hybridus HOM05D006103 ORTHO05D007468 1.5e-10 71.2 62 58.1
RcHm_v2.0_Chr6g0308841 Rosa chinensis HOM05D006103 ORTHO05D007468 5.1e-06 56.2 30 86.7


User provided reference genes

Program Settings