Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027150 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 1.2e-138 496.5 260 100.0
CSS0019614 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D000562 1.8e-137 492.7 260 98.8
CSS0029223 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D111692 2.0e-43 180.3 268 44.8
Atru.chr1.1796 Acer truncatum HOM05D000593 ORTHO05D000562 3.2e-09 66.6 119 34.5
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 3.2e-09 66.6 119 34.5
Atru.chr6.1396 Acer truncatum HOM05D000593 ORTHO05D000562 5.4e-09 65.9 129 34.9
CSS0048160 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.0e-08 62.4 126 33.3
CSS0012549 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 1.0e-07 61.6 70 42.9
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 1.7e-07 60.8 118 31.4
Atru.chr1.3005 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-07 60.5 131 30.5
Atru.chr7.1886 Acer truncatum HOM05D000593 ORTHO05D000562 2.3e-07 60.5 119 33.6
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 3.0e-07 60.1 119 31.9
CSS0047596 Camellia sinensis var. sinensis HOM05D024150 ORTHO05D004526 3.0e-07 60.1 70 41.4
CSS0027439 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 6.6e-07 58.9 110 35.5
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.9e-06 57.4 120 31.7
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 3.3e-06 56.6 122 31.1
CsaV3_6G052370 Cucumis sativus L. HOM05D000169 ORTHO05D007693 9.5e-06 55.1 131 28.2
Medtr1g081740 Medicago truncatula HOM05D007688 ORTHO05D004526 9.5e-06 55.1 80 32.5


User provided reference genes

Program Settings