Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.5e-167 591.7 326 100.0
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 9.1e-155 550.4 326 91.7
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.1e-151 537.7 326 88.7
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.0e-98 361.7 322 62.1
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 4.9e-92 342.0 324 61.4
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.1e-91 340.9 331 61.3
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-54 217.2 317 45.1
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 6.9e-54 215.3 326 44.2
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.8e-53 212.2 332 43.4
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.9e-40 170.6 237 45.6
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.6e-37 160.2 249 41.8
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.3e-32 143.3 219 42.9
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.2e-29 134.8 218 38.5
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 3.2e-19 100.1 104 49.0
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 7.2e-19 99.0 143 39.9
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 6.1e-18 95.9 108 46.3
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 1.4e-17 94.7 153 35.3
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.0e-17 93.6 111 44.1
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.5e-16 91.3 136 41.9
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 4.4e-16 89.7 98 48.0
Cfa016030 Carpinus fangiana HOM05D000125 ORTHO05D010101 5.7e-16 89.4 137 40.1
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 5.7e-16 89.4 100 47.0
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 5.7e-16 89.4 237 30.0
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 1.3e-15 88.2 239 30.1
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 1.7e-15 87.8 137 40.1
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 2.2e-15 87.4 114 45.6
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 4.8e-15 86.3 145 35.2
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 4.8e-15 86.3 135 39.3
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.4e-14 84.7 130 36.2
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.4e-14 84.0 173 34.7
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-14 83.6 147 36.7
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-14 83.6 147 36.7
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 7.0e-14 82.4 129 35.7
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 7.0e-14 82.4 135 38.5
Haze_00511 Corylus avellana HOM05D009378 ORTHO05D010101 1.2e-13 81.6 100 45.0
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 2.0e-13 80.9 99 41.4
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 2.0e-13 80.9 99 41.4
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 2.7e-13 80.5 155 34.2
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 2.7e-13 80.5 142 38.0
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.5e-13 80.1 137 38.0
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 4.5e-13 79.7 101 39.6
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 5.9e-13 79.3 142 37.3
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 7.7e-13 79.0 136 39.7
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 1.3e-12 78.2 164 29.3
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 1.3e-12 78.2 102 45.1
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 1.3e-12 78.2 106 34.9
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 1.3e-12 78.2 131 33.6
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 1.3e-12 78.2 99 41.4
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 2.2e-12 77.4 104 34.6
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 2.9e-12 77.0 213 27.2
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.8e-12 76.6 102 42.2
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 5.0e-12 76.3 112 37.5
Haze_13413 Corylus avellana HOM05D000125 ORTHO05D010101 5.0e-12 76.3 118 39.8
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 8.5e-12 75.5 178 30.3
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 7.2e-11 72.4 105 38.1
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 3.6e-10 70.1 103 38.8
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 8.0e-10 68.9 112 36.6
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 5.2e-09 66.2 115 31.3
MELO3C005509.2 Cucumis melo HOM05D024292 ORTHO05D010101 5.2e-09 66.2 115 32.2
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 6.8e-09 65.9 101 39.6
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 3.4e-08 63.5 105 33.3
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 4.4e-08 63.2 105 32.4
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 5.7e-08 62.8 121 28.1
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 7.5e-08 62.4 111 33.3
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 9.8e-08 62.0 111 36.0
Eucgr.E00393 Eucalyptus grandis HOM05D000125 ORTHO05D000120 1.7e-07 61.2 105 35.2
CsaV3_5G004510 Cucumis sativus L. HOM05D024292 ORTHO05D010101 2.8e-07 60.5 115 29.6
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 6.3e-07 59.3 305 26.2
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 1.8e-06 57.8 133 29.3
PGR042G3408 Punica granatum HOM05D000125 ORTHO05D000120 1.8e-06 57.8 101 32.7
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 2.4e-06 57.4 49 59.2
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 4.1e-06 56.6 114 30.7
CANSAT11G2639 Cannabis sativa HOM05D000125 ORTHO05D010101 5.4e-06 56.2 106 28.3
Ciclev10027164m.g Citrus clementina HOM05D000125 ORTHO05D000120 7.0e-06 55.8 105 26.7
Dinv20791 Davidia involucrata HOM05D000699 ORTHO05D000519 9.1e-06 55.5 126 30.2


User provided reference genes

Program Settings