Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 3.0e-139 498.4 242 100.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 1.1e-88 330.5 201 78.6
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 4.4e-82 308.5 263 64.3
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 5.8e-82 308.1 230 65.7
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 5.8e-82 308.1 238 65.5
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 1.7e-81 306.6 244 63.9
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 4.2e-80 302.0 226 65.9
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 8.7e-78 294.3 221 63.8
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 2.8e-76 289.3 216 63.4
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 6.9e-75 284.6 230 66.1
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 2.6e-74 282.7 225 62.7
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 3.4e-74 282.3 196 69.9
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 3.4e-74 282.3 236 62.7
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 2.2e-73 279.6 194 67.5
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.2e-73 279.6 229 62.0
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 2.9e-73 279.3 231 59.3
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 8.4e-73 277.7 174 71.3
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 1.1e-72 277.3 193 66.3
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 1.9e-72 276.6 201 65.2
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 1.9e-72 276.6 202 68.3
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 2.4e-72 276.2 219 61.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 2.4e-72 276.2 189 70.4
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 2.4e-72 276.2 204 66.2
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 3.2e-72 275.8 235 60.0
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 3.2e-72 275.8 202 66.3
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 4.2e-72 275.4 174 71.8
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 5.4e-72 275.0 204 65.7
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 5.4e-72 275.0 190 68.4
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 5.4e-72 275.0 227 59.9
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 7.1e-72 274.6 243 62.6
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 7.1e-72 274.6 204 66.2
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 1.2e-71 273.9 188 69.7
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 2.1e-71 273.1 199 65.8
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 2.1e-71 273.1 227 60.8
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 2.7e-71 272.7 192 65.1
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 2.7e-71 272.7 243 57.2
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 3.5e-71 272.3 232 61.6
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 7.9e-71 271.2 207 64.7
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 7.9e-71 271.2 174 71.3
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 1.0e-70 270.8 201 63.7
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 1.8e-70 270.0 188 69.1
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 2.3e-70 269.6 190 68.4
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 3.0e-70 269.2 199 66.8
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 6.7e-70 268.1 214 61.7
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 8.7e-70 267.7 214 61.7
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.5e-69 266.9 214 60.7
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 1.9e-69 266.5 211 59.2
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 3.3e-69 265.8 237 60.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 4.3e-69 265.4 201 64.2
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 2.8e-68 262.7 219 60.7
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 3.7e-68 262.3 222 60.8
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 3.7e-68 262.3 190 63.7
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.1e-67 260.8 198 65.2
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 1.8e-67 260.0 198 65.2
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 3.1e-67 259.2 186 62.9
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 3.1e-67 259.2 203 61.1
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.5e-66 256.9 242 55.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 2.2e-65 253.1 191 63.9
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 1.1e-64 250.8 363 41.6
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 1.9e-64 250.0 230 56.5
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 2.5e-64 249.6 191 61.3
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 4.2e-64 248.8 225 55.1
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 4.2e-64 248.8 192 58.3
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 9.3e-64 247.7 185 62.7
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.6e-63 246.9 228 53.9
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 1.6e-63 246.9 250 52.8
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.6e-63 246.9 197 62.4
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 3.5e-63 245.7 246 54.1
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 6.0e-63 245.0 232 53.9
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 7.9e-63 244.6 185 62.2
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 3.0e-62 242.7 236 53.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 3.9e-62 242.3 247 52.6
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 6.7e-62 241.5 222 54.1
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 2.5e-61 239.6 237 52.3
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 6.9e-59 231.5 250 49.6
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.7e-57 226.9 184 59.2
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 2.2e-57 226.5 202 58.9
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 3.8e-57 225.7 235 51.5
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 1.0e-54 217.6 210 51.9
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 6.7e-54 214.9 178 61.2
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 3.3e-53 212.6 207 53.1
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 4.8e-52 208.8 193 53.4
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 1.8e-51 206.8 210 51.9
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 2.4e-51 206.5 200 52.5
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 2.2e-49 199.9 182 51.6
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 3.0e-46 189.5 125 73.6
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 1.7e-44 183.7 147 53.7
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 2.4e-43 179.9 125 69.6
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 1.0e-38 164.5 119 64.7
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 1.4e-38 164.1 118 64.4
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 7.7e-34 148.3 145 53.1
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 6.7e-30 135.2 175 44.0
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 8.8e-30 134.8 119 57.1
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 6.3e-20 102.1 51 84.3
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 1.1e-19 101.3 67 68.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 1.3e-17 94.4 59 67.8
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.7e-17 94.0 79 59.5
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 5.0e-17 92.4 51 76.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.6e-15 86.3 64 60.9
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 6.1e-07 58.9 96 34.4


User provided reference genes

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