Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027125 Camellia sinensis var. sinensis HOM05D007006 ORTHO05D008925 3.1e-87 325.1 163 100.0
Actinidia07621 Actinidia chinensis HOM05D007006 ORTHO05D008925 3.3e-81 305.1 163 91.4
Dinv17375 Davidia involucrata HOM05D007006 ORTHO05D008925 2.0e-78 295.8 166 88.6
Atru.chr10.1745 Acer truncatum HOM05D007006 ORTHO05D008925 1.6e-75 286.2 161 86.3
GSVIVG01021151001 Vitis vinifera HOM05D007006 ORTHO05D008925 4.6e-75 284.6 163 82.8
Gohir.A10G029300 Gossypium hirsutum HOM05D007006 ORTHO05D008925 7.9e-75 283.9 161 84.5
Gohir.D10G029800 Gossypium hirsutum HOM05D007006 ORTHO05D008925 7.9e-75 283.9 161 84.5
Gorai.011G031700 Gossypium raimondii HOM05D007006 ORTHO05D008925 7.9e-75 283.9 161 84.5
TAR626G0127 Trochodendron aralioides HOM05D007006 ORTHO05D008925 6.7e-74 280.8 160 83.1
Duzib160G0118 Durio zibethinus HOM05D007006 ORTHO05D008925 8.7e-74 280.4 161 82.6
PSO210G2152 Papaver somniferum HOM05D007006 ORTHO05D008925 2.5e-73 278.9 160 83.8
Nn1g04307 Nelumbo nucifera HOM05D007006 ORTHO05D008925 9.7e-73 276.9 153 85.6
Rhsim02G0152900 Rhododendron simsii HOM05D007006 ORTHO05D008925 1.6e-72 276.2 158 87.3
Eucgr.E03165 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.8e-72 275.4 162 80.9
Thecc.06G177200 Theobroma cacao HOM05D007006 ORTHO05D008925 1.4e-71 273.1 165 79.4
CiPaw.10G055000 Carya illinoinensis HOM05D007006 ORTHO05D008925 1.8e-71 272.7 161 81.4
Manes.16G034601 Manihot esculenta HOM05D007006 ORTHO05D008925 1.8e-71 272.7 158 82.3
MD10G1285600 Malus domestica HOM05D007006 ORTHO05D008925 4.1e-71 271.6 161 82.6
Thhalv10026439m.g Eutrema salsugineum HOM05D007006 ORTHO05D008925 5.3e-71 271.2 161 80.1
Oeu001091.1 Olea europaea HOM05D007006 ORTHO05D008925 9.0e-71 270.4 163 80.4
Haze_06320 Corylus avellana HOM05D007006 ORTHO05D008925 4.5e-70 268.1 161 81.4
Prupe.4G056000 Prunus persica HOM05D007006 ORTHO05D008925 4.5e-70 268.1 161 80.7
CsaV3_1G012640 Cucumis sativus L. HOM05D007006 ORTHO05D008925 5.9e-70 267.7 161 81.4
AL7G35820 Arabidopsis lyrata HOM05D007006 ORTHO05D008925 7.7e-70 267.3 161 77.6
THA.LOC104798412 Tarenaya hassleriana HOM05D007006 ORTHO05D008925 1.0e-69 266.9 161 78.9
Potri.011G062200 Populus trichocarpa HOM05D007006 ORTHO05D008925 1.3e-69 266.5 157 79.0
AT4G18460 Arabidopsis thaliana HOM05D007006 ORTHO05D008925 1.7e-69 266.2 153 81.0
Hma1.2p1_0155F.1_g068540 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.2e-69 265.8 150 86.7
Carub.0007s2277 Capsella rubella HOM05D007006 ORTHO05D008925 5.0e-69 264.6 158 78.5
TPR.G31857 Trifolium pratense HOM05D007006 ORTHO05D008925 6.5e-69 264.2 160 80.6
RcHm_v2.0_Chr5g0009821 Rosa chinensis HOM05D007006 ORTHO05D008925 1.1e-68 263.5 161 80.1
MSTRG.7381 Avicennia marina HOM05D007006 ORTHO05D008925 1.4e-68 263.1 160 77.5
COL.COLO4_31384 Corchorus olitorius HOM05D007006 ORTHO05D008976 1.9e-68 262.7 174 74.1
Migut.M01077 Erythranthe guttata HOM05D007006 ORTHO05D008925 3.2e-68 261.9 157 82.8
Aa31LG6G1200 Aethionema arabicum HOM05D007006 ORTHO05D008925 4.2e-68 261.5 161 77.0
Sabra11G0042600 Salix brachista HOM05D007006 ORTHO05D008925 4.2e-68 261.5 170 74.7
Sabra11G0044100 Salix brachista HOM05D007006 ORTHO05D008925 4.2e-68 261.5 170 74.7
ATR0602G073 Amborella trichopoda HOM05D007006 ORTHO05D008925 5.5e-68 261.2 164 78.7
Lj6g0023400 Lotus japonicus HOM05D007006 ORTHO05D008925 7.2e-68 260.8 160 80.0
Nitab4.5_0000376g0100 Nicotiana tabacum HOM05D007006 ORTHO05D008925 1.2e-67 260.0 153 81.0
arahy.Tifrunner.gnm1.ann1.PE4VQR Arachis hypogaea HOM05D000109 ORTHO05D000965 1.6e-67 259.6 160 78.8
CARHR225300 Cardamine hirsuta HOM05D007006 ORTHO05D008925 1.6e-67 259.6 153 79.7
Phvul.006G179400 Phaseolus vulgaris HOM05D007006 ORTHO05D008925 2.1e-67 259.2 160 78.8
Sopen02g022230 Solanum pennellii HOM05D007006 ORTHO05D008925 2.1e-67 259.2 153 81.0
PGSC0003DMG400010717 Solanum tuberosum HOM05D007006 ORTHO05D008925 2.1e-67 259.2 153 81.0
Solyc02g077310.4 Solanum lycopersicum HOM05D007006 ORTHO05D008925 2.7e-67 258.8 153 81.0
BcaC09g51505 Brassica carinata HOM05D007006 ORTHO05D008925 4.6e-67 258.1 162 74.7
VMungo0540G0068 Vigna mungo HOM05D007006 ORTHO05D008925 4.6e-67 258.1 160 78.8
BraA01t00989Z Brassica rapa HOM05D007006 ORTHO05D008925 6.1e-67 257.7 153 77.1
Zm00001eb122370 Zea mays HOM05D007006 ORTHO05D008925 6.1e-67 257.7 148 83.8
Glyma.15G079600 Glycine max HOM05D007006 ORTHO05D008925 7.9e-67 257.3 152 80.9
Sp7g15560 Schrenkiella parvula HOM05D007006 ORTHO05D008925 7.9e-67 257.3 161 76.4
Sed0005765 Sechium edule HOM05D007006 ORTHO05D008925 1.4e-66 256.5 154 79.2
Sc05g0007280 Simmondsia chinensis HOM05D007006 ORTHO05D008925 1.4e-66 256.5 160 79.4
CAN.G79.66 Capsicum annuum HOM05D007006 ORTHO05D008925 1.8e-66 256.1 153 79.7
FAN21G1832 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.0e-66 255.4 159 78.0
Glyma.13G233500 Glycine max HOM05D007006 ORTHO05D008925 3.0e-66 255.4 152 80.3
TWI63G0680 Tripterygium wilfordii HOM05D007006 ORTHO05D008925 3.0e-66 255.4 155 80.0
BolC1t01215H Brassica oleracea HOM05D007006 ORTHO05D008925 3.9e-66 255.0 154 76.6
Nitab4.5_0011727g0040 Nicotiana tabacum HOM05D007006 ORTHO05D008925 8.8e-66 253.8 161 77.0
MELO3C002631.2 Cucumis melo HOM05D007006 ORTHO05D008925 2.0e-65 252.7 163 79.1
Ca_11669_v3 Cicer arietinum L. HOM05D007006 ORTHO05D008925 2.5e-65 252.3 160 78.8
HanXRQChr01g0008471 Helianthus annuus HOM05D007006 ORTHO05D008925 2.5e-65 252.3 160 76.9
ECA248G3223 Erigeron canadensis HOM05D007006 ORTHO05D008925 4.3e-65 251.5 160 75.0
SEGI_08558 Sequoiadendron giganteum HOM05D007006 ORTHO05D008925 9.7e-65 250.4 148 82.4
SalBow8G1160 Salvia bowleyana HOM05D007006 ORTHO05D008925 1.7e-64 249.6 150 78.7
CANSAT35G1771 Cannabis sativa HOM05D007006 ORTHO05D008925 4.8e-64 248.1 151 77.5
Psat1g148320 Pisum sativum HOM05D007006 ORTHO05D008925 6.3e-64 247.7 151 79.5
BcaNung05874 Brassica carinata HOM05D007006 ORTHO05D008925 8.2e-64 247.3 161 72.7
Os01g0242500 Oryza sativa ssp. japonica HOM05D007006 ORTHO05D008925 1.1e-63 246.9 162 74.1
CDE02G4743 Ceratophyllum demersum HOM05D007006 ORTHO05D008925 4.1e-63 245.0 159 73.6
HPP92_002943 Vanilla planifolia HOM05D007006 ORTHO05D008925 7.7e-62 240.7 148 78.4
Lj1A1197T80 Lonicera japonica HOM05D007006 ORTHO05D008925 1.3e-61 240.0 156 76.9
Medtr2g036040 Medicago truncatula HOM05D007006 ORTHO05D008925 3.8e-61 238.4 164 73.8
Cc02_g14310 Coffea canephora HOM05D007006 ORTHO05D008925 2.5e-60 235.7 138 82.6
SGA_v2.0_scaffold309G48130 Striga asiatica HOM05D007006 ORTHO05D008925 2.5e-60 235.7 153 76.5
Hma1.2p1_0155F.1_g068550 Hydrangea macrophylla HOM05D007006 ORTHO05D008925 2.7e-59 232.3 161 75.2
SGA_v2.0_scaffold309G48148 Striga asiatica HOM05D007006 ORTHO05D008925 6.1e-59 231.1 179 67.6
FvH4_3g08260 Fragaria vesca HOM05D007006 ORTHO05D008925 1.4e-58 229.9 136 79.4
FAN11G3635 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.9e-58 228.4 134 79.9
FAN16G3644 Fragaria x ananassa HOM05D007006 ORTHO05D008925 3.9e-58 228.4 134 79.9
SMO356G0615 Selaginella moellendorffii HOM05D007006 ORTHO05D008925 3.9e-58 228.4 156 70.5
ClCG03G007950 Citrullus lanatus HOM05D007006 ORTHO05D008925 2.6e-57 225.7 215 59.1
Mapoly0096s0066 Marchantia polymorpha HOM05D007006 ORTHO05D008925 2.8e-56 222.2 148 72.3
Ciclev10016962m.g Citrus clementina HOM05D007006 ORTHO05D008925 1.8e-55 219.5 124 83.1
Eucgr.E02654 Eucalyptus grandis HOM05D007006 ORTHO05D008925 2.4e-55 219.2 124 83.1
CBR_g12914 Chara braunii HOM05D007006 ORTHO05D008925 4.1e-55 218.4 162 66.7
Pp3c2_4790 Physcomitrium patens HOM05D007006 ORTHO05D008925 9.1e-55 217.2 138 72.5
Cpa.g.sc7.31 Carica papaya HOM05D007006 ORTHO05D008925 1.2e-54 216.9 129 78.3
Hund21193 Selenicereus undatus HOM05D007006 ORTHO05D008925 1.5e-54 216.5 134 79.1
A01p10430 Brassica napus HOM05D007006 ORTHO05D008925 2.0e-54 216.1 155 69.0
C01p12410 Brassica napus HOM05D007006 ORTHO05D008925 1.7e-53 213.0 156 68.6
CBR_g28086 Chara braunii HOM05D007006 ORTHO05D008925 1.1e-52 210.3 162 63.0
Cfa000555 Carpinus fangiana HOM05D007006 ORTHO05D008925 8.5e-45 184.1 174 59.2
AUR62031124 Chenopodium quinoa HOM05D007006 ORTHO05D008925 5.5e-44 181.4 153 62.7
EL10Ac8g20473 Beta vulgaris HOM05D007006 ORTHO05D008925 1.2e-43 180.3 163 58.9
DCAR_004029 Daucus carota HOM05D007006 ORTHO05D008925 1.8e-42 176.4 106 77.4
Lsat_1_v5_gn_1_120360 Lactuca sativa HOM05D007006 ORTHO05D008925 6.8e-42 174.5 116 70.7
AUR62014917 Chenopodium quinoa HOM05D007006 ORTHO05D008925 1.5e-41 173.3 153 60.8
RcHm_v2.0_Chr5g0007981 Rosa chinensis HOM05D007006 ORTHO05D008925 3.7e-40 168.7 127 68.5
Cre12.g542000 Chlamydomonas reinhardtii HOM05D007006 ORTHO05D008925 7.0e-39 164.5 152 54.6
PSO832G1055 Papaver somniferum HOM05D007006 ORTHO05D008925 2.9e-37 159.1 93 79.6
Peaxi162Scf00875g00318 Petunia axillaris HOM05D007006 ORTHO05D008925 8.5e-37 157.5 110 63.6
PGR042G2307 Punica granatum HOM05D007006 ORTHO05D008925 1.9e-36 156.4 95 75.8
MBI06_g25712_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 2.5e-36 156.0 97 77.3
MCO06G160 Micromonas commoda HOM05D007006 ORTHO05D008925 1.2e-35 153.7 162 54.3
Haze_27122 Corylus avellana HOM05D007006 ORTHO05D008925 1.3e-32 143.7 161 44.7
PRCOL_00003508 Prasinoderma coloniale HOM05D007006 ORTHO05D008925 1.6e-30 136.7 149 49.7
Lalb_Chr20g0121401 Lupinus albus HOM05D007006 ORTHO05D008925 3.3e-28 129.0 79 72.2
CBR_g41520 Chara braunii HOM05D000019 ORTHO05D000002 1.2e-19 100.5 64 68.8
Actinidia39491 Actinidia chinensis HOM05D007006 ORTHO05D008925 2.9e-16 89.4 79 63.3
SGA_v2.0_scaffold309G48132 Striga asiatica HOM05D007006 ORTHO05D008925 4.9e-16 88.6 57 70.2
MBI06_g25714_MAGBIO Magnolia biondii HOM05D007006 ORTHO05D008925 3.1e-10 69.3 42 81.0


User provided reference genes

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