Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027116 Camellia sinensis var. sinensis HOM05D002367 ORTHO05D113265 1.4e-92 342.8 164 100.0
CSS0032034 Camellia sinensis var. sinensis HOM05D002367 ORTHO05D002566 8.1e-11 71.2 31 100.0
Dinv05067 Davidia involucrata HOM05D002367 ORTHO05D002566 7.6e-09 64.7 31 83.9
Hma1.2p1_0115F.1_g056010 Hydrangea macrophylla HOM05D002367 ORTHO05D002566 7.6e-09 64.7 31 87.1
CSS0003007 Camellia sinensis var. sinensis HOM05D002367 ORTHO05D002566 1.7e-08 63.5 31 87.1
CSS0010739 Camellia sinensis var. sinensis HOM05D002367 ORTHO05D002566 1.7e-08 63.5 31 87.1
Nitab4.5_0004018g0050 Nicotiana tabacum HOM05D002367 ORTHO05D002566 3.8e-08 62.4 31 83.9
CANSAT64G0031 Cannabis sativa HOM05D002367 ORTHO05D002566 4.9e-08 62.0 36 72.2
Haze_19726 Corylus avellana HOM05D002367 ORTHO05D002566 4.9e-08 62.0 109 36.7
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 4.9e-08 62.0 109 39.4
PGSC0003DMG400031242 Solanum tuberosum HOM05D002367 ORTHO05D002566 4.9e-08 62.0 41 63.4
Oeu061289.1 Olea europaea HOM05D002367 ORTHO05D002566 6.4e-08 61.6 31 80.6
Cc01_g05680 Coffea canephora HOM05D002367 ORTHO05D002566 8.4e-08 61.2 31 80.6
Peaxi162Scf00004g04121 Petunia axillaris HOM05D002367 ORTHO05D002566 8.4e-08 61.2 41 63.4
vmacro04018 Vaccinium macrocarpon HOM05D002367 ORTHO05D002566 8.4e-08 61.2 30 86.7
COL.COLO4_35827 Corchorus olitorius HOM05D002367 ORTHO05D002566 1.4e-07 60.5 31 77.4
Nitab4.5_0002726g0040 Nicotiana tabacum HOM05D002367 ORTHO05D002566 1.4e-07 60.5 31 80.6
EL10Ac3g07195 Beta vulgaris HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 77.4
CAN.G1167.4 Capsicum annuum HOM05D002367 ORTHO05D002566 1.9e-07 60.1 41 61.0
AUR62030358 Chenopodium quinoa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 77.4
AUR62040841 Chenopodium quinoa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 77.4
FvH4_3g28070 Fragaria vesca HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
FAN11G2018 Fragaria x ananassa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
FAN16G2312 Fragaria x ananassa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
FAN21G2035 Fragaria x ananassa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
FAN25G0320 Fragaria x ananassa HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
Nitab4.5_0001290g0030 Nicotiana tabacum HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
Nitab4.5_0002310g0040 Nicotiana tabacum HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
Prupe.4G258900 Prunus persica HOM05D002367 ORTHO05D002566 1.9e-07 60.1 31 74.2
QL07p008440 Quercus lobata HOM05D002367 ORTHO05D002566 1.9e-07 60.1 30 80.0
Actinidia06953 Actinidia chinensis HOM05D002367 ORTHO05D002566 2.4e-07 59.7 31 80.6
Cfa016698 Carpinus fangiana HOM05D002367 ORTHO05D002566 2.4e-07 59.7 30 80.0
CiPaw.14G114200 Carya illinoinensis HOM05D002367 ORTHO05D002566 2.4e-07 59.7 30 80.0
Lalb_Chr14g0365911 Lupinus albus HOM05D002367 ORTHO05D002566 2.4e-07 59.7 31 71.0
Nn2g14908 Nelumbo nucifera HOM05D002367 ORTHO05D002566 2.4e-07 59.7 30 76.7
SGA_v2.0_scaffold8G04553 Striga asiatica HOM05D002367 ORTHO05D002566 2.4e-07 59.7 35 65.7
MBI13_g29516_MAGBIO Magnolia biondii HOM05D002367 ORTHO05D002566 3.2e-07 59.3 30 80.0
GSVIVG01037248001 Vitis vinifera HOM05D002367 ORTHO05D002566 3.2e-07 59.3 41 61.0
Lsat_1_v5_gn_2_25161 Lactuca sativa HOM05D002367 ORTHO05D002566 4.2e-07 58.9 30 80.0
Oeu025896.1 Olea europaea HOM05D002367 ORTHO05D002566 4.2e-07 58.9 31 74.2
Solyc12g099770.2 Solanum lycopersicum HOM05D002367 ORTHO05D002566 4.2e-07 58.9 31 71.0
Sopen12g034400 Solanum pennellii HOM05D002367 ORTHO05D002566 4.2e-07 58.9 31 71.0
PGSC0003DMG400004644 Solanum tuberosum HOM05D002367 ORTHO05D002566 4.2e-07 58.9 31 71.0
Actinidia16368 Actinidia chinensis HOM05D002367 ORTHO05D002566 5.4e-07 58.5 31 77.4
BcaC07g40076 Brassica carinata HOM05D002367 ORTHO05D009515 5.4e-07 58.5 32 68.8
Lalb_Chr22g0357341 Lupinus albus HOM05D002367 ORTHO05D002566 7.1e-07 58.2 31 67.7
TAR369G0505 Trochodendron aralioides HOM05D002367 ORTHO05D002566 7.1e-07 58.2 31 74.2
AL5G38580 Arabidopsis lyrata HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 67.7
BcaC07g40046 Brassica carinata HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 71.0
Ca_08404_v3 Cicer arietinum L. HOM05D002367 ORTHO05D002566 9.3e-07 57.8 30 70.0
Dinv08496 Davidia involucrata HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 74.2
Duzib056G0005 Durio zibethinus HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 71.0
Duzib093G2144 Durio zibethinus HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 74.2
Duzib128G1317 Durio zibethinus HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 71.0
Medtr7g090210 Medicago truncatula HOM05D002367 ORTHO05D002566 9.3e-07 57.8 31 71.0
Nn7g36604 Nelumbo nucifera HOM05D002367 ORTHO05D002566 9.3e-07 57.8 30 76.7
PSO384G2959 Papaver somniferum HOM05D002367 ORTHO05D002566 9.3e-07 57.8 109 33.9
AT3G57090 Arabidopsis thaliana HOM05D002367 ORTHO05D002566 1.2e-06 57.4 31 67.7
Hma1.2p1_0470F.1_g159230 Hydrangea macrophylla HOM05D002367 ORTHO05D002566 1.2e-06 57.4 31 77.4
Lsat_1_v5_gn_5_70900 Lactuca sativa HOM05D002367 ORTHO05D002566 1.2e-06 57.4 30 76.7
Lj1g0021568 Lotus japonicus HOM05D002367 ORTHO05D002566 1.2e-06 57.4 31 67.7
Solyc11g065100.3 Solanum lycopersicum HOM05D002367 ORTHO05D002566 1.2e-06 57.4 41 61.0
Sopen11g024840 Solanum pennellii HOM05D002367 ORTHO05D002566 1.2e-06 57.4 41 61.0
Thecc.05G140200 Theobroma cacao HOM05D002367 ORTHO05D002566 1.2e-06 57.4 30 76.7
GSVIVG01033594001 Vitis vinifera HOM05D002367 ORTHO05D002566 1.2e-06 57.4 31 71.0
CAN.G575.97 Capsicum annuum HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 71.0
CARHR167290 Cardamine hirsuta HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 67.7
Gohir.A13G217900 Gossypium hirsutum HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 67.7
Gohir.D13G221666 Gossypium hirsutum HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 67.7
Gorai.013G252800 Gossypium raimondii HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 67.7
HanXRQChr12g0380301 Helianthus annuus HOM05D002367 ORTHO05D002566 2.1e-06 56.6 109 34.9
RcHm_v2.0_Chr5g0050751 Rosa chinensis HOM05D002367 ORTHO05D002566 2.1e-06 56.6 31 71.0
BcaC07g40026 Brassica carinata HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 67.7
A09p50020 Brassica napus HOM05D002367 ORTHO05D009515 2.7e-06 56.2 31 67.7
C08p32430 Brassica napus HOM05D002367 ORTHO05D009515 2.7e-06 56.2 31 67.7
BolC8t50858H Brassica oleracea HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 67.7
BraA09t40454Z Brassica rapa HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 67.7
Thhalv10006275m.g Eutrema salsugineum HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 67.7
SalBow6G2637 Salvia bowleyana HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 71.0
Zm00001eb347110 Zea mays HOM05D002367 ORTHO05D002566 2.7e-06 56.2 31 67.7
DCAR_002118 Daucus carota HOM05D002367 ORTHO05D002566 3.5e-06 55.8 30 73.3
Lj1A297G61 Lonicera japonica HOM05D002367 ORTHO05D002566 3.5e-06 55.8 33 69.7
Carub.0005s2391 Capsella rubella HOM05D002367 ORTHO05D002566 4.6e-06 55.5 31 64.5
Migut.D00649 Erythranthe guttata HOM05D002367 ORTHO05D002566 4.6e-06 55.5 30 73.3
Psat3g077840 Pisum sativum HOM05D002367 ORTHO05D002566 4.6e-06 55.5 31 64.5
Sp5g05470 Schrenkiella parvula HOM05D002367 ORTHO05D002566 4.6e-06 55.5 31 64.5
TAR623G0279 Trochodendron aralioides HOM05D002367 ORTHO05D002566 4.6e-06 55.5 31 71.0
MSTRG.21353 Avicennia marina HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 67.7
CDE09G0406 Ceratophyllum demersum HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 74.2
Thhalv10017329m.g Eutrema salsugineum HOM05D002367 ORTHO05D002566 6.0e-06 55.1 32 59.4
Gohir.A09G118600 Gossypium hirsutum HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 64.5
Gohir.D09G115428 Gossypium hirsutum HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 64.5
Manes.01G181200 Manihot esculenta HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 71.0
Sp4g05360 Schrenkiella parvula HOM05D002367 ORTHO05D002566 6.0e-06 55.1 30 66.7
Thecc.09G244800 Theobroma cacao HOM05D002367 ORTHO05D002566 6.0e-06 55.1 31 74.2
unitig_62.g23899 Utricularia gibba HOM05D002367 ORTHO05D002566 6.0e-06 55.1 27 77.8
CiPaw.10G038700 Carya illinoinensis HOM05D002367 ORTHO05D002566 7.8e-06 54.7 30 66.7
MD11G1194400 Malus domestica HOM05D002367 ORTHO05D002566 7.8e-06 54.7 27 74.1
Hund07446 Selenicereus undatus HOM05D002367 ORTHO05D002566 7.8e-06 54.7 30 73.3


User provided reference genes

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