Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027115 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 0.0e+00 1164.1 602 100.0
Dinv39406 Davidia involucrata HOM05D005308 ORTHO05D006494 3.2e-222 775.4 617 69.5
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 2.3e-212 742.7 611 66.4
Hma1.2p1_0077F.1_g039700 Hydrangea macrophylla HOM05D005308 ORTHO05D006494 4.6e-205 718.4 656 62.2
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 8.2e-202 707.6 644 60.9
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 1.8e-201 706.4 679 58.3
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 3.4e-200 702.2 628 61.8
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 5.5e-198 694.9 593 63.2
Atru.chr8.2603 Acer truncatum HOM05D005308 ORTHO05D006494 3.6e-197 692.2 633 58.9
Atru.chr13.513 Acer truncatum HOM05D005308 ORTHO05D006494 1.0e-196 690.6 633 58.8
Prupe.1G381500 Prunus persica HOM05D005308 ORTHO05D006494 3.9e-196 688.7 627 59.8
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 5.1e-196 688.3 609 60.9
Haze_17987 Corylus avellana HOM05D005308 ORTHO05D006494 9.7e-195 684.1 645 60.0
Potri.014G180900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.4e-193 680.2 635 60.5
Ciclev10000534m.g Citrus clementina HOM05D005308 ORTHO05D006494 3.1e-193 679.1 640 58.1
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 9.1e-193 677.6 637 61.1
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 9.1e-193 677.6 633 60.3
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.2e-192 677.2 633 60.7
Nitab4.5_0003783g0070 Nicotiana tabacum HOM05D005308 ORTHO05D006494 1.4e-190 670.2 642 57.3
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 1.9e-190 669.8 626 58.3
Thecc.08G024400 Theobroma cacao HOM05D005308 ORTHO05D006494 3.2e-190 669.1 639 58.7
Nitab4.5_0000110g0380 Nicotiana tabacum HOM05D005308 ORTHO05D006494 7.2e-190 667.9 649 57.2
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 3.6e-189 665.6 659 57.8
FvH4_2g39960 Fragaria vesca HOM05D005308 ORTHO05D006494 4.7e-189 665.2 573 62.0
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 1.0e-188 664.1 575 61.7
Lj4P784T41 Lonicera japonica HOM05D005308 ORTHO05D006494 1.4e-188 663.7 575 62.3
FAN15G3722 Fragaria x ananassa HOM05D005308 ORTHO05D006494 5.1e-188 661.8 579 61.7
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 6.7e-188 661.4 647 59.2
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 5.7e-187 658.3 631 57.8
MELO3C010930.2 Cucumis melo HOM05D005308 ORTHO05D006494 4.8e-186 655.2 633 56.7
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 8.2e-186 654.4 598 60.2
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.4e-185 653.7 632 56.3
PGSC0003DMG400005144 Solanum tuberosum HOM05D005308 ORTHO05D006494 2.4e-185 652.9 629 57.6
Duzib093G0415 Durio zibethinus HOM05D005308 ORTHO05D006494 3.1e-185 652.5 581 62.8
CAN.G1126.42 Capsicum annuum HOM05D005308 ORTHO05D006494 5.3e-185 651.7 642 57.5
Cc03_g06460 Coffea canephora HOM05D005308 ORTHO05D006494 7.0e-185 651.4 633 57.0
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 7.0e-185 651.4 598 60.0
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 7.0e-185 651.4 619 58.5
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.6e-184 650.2 639 55.7
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 1.6e-184 650.2 639 55.7
Lj5g0021582 Lotus japonicus HOM05D005308 ORTHO05D006494 3.5e-184 649.0 638 55.8
Solyc04g080180.1 Solanum lycopersicum HOM05D005308 ORTHO05D006494 3.5e-184 649.0 629 57.7
Eucgr.F01908 Eucalyptus grandis HOM05D005308 ORTHO05D006494 7.7e-184 647.9 629 57.7
Gorai.010G011100 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.9e-183 646.0 623 57.9
Sopen04g033770 Solanum pennellii HOM05D005308 ORTHO05D006494 6.5e-183 644.8 629 57.7
EL10Ac9g23018 Beta vulgaris HOM05D005308 ORTHO05D006494 1.1e-182 644.0 577 60.3
Gohir.D06G008300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 1.9e-182 643.3 623 57.9
Gohir.A06G010900 Gossypium hirsutum HOM05D005308 ORTHO05D006494 3.6e-181 639.0 623 57.8
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 3.6e-181 639.0 628 57.3
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 1.8e-180 636.7 633 55.9
Gohir.A05G195300 Gossypium hirsutum HOM05D005308 ORTHO05D006494 6.7e-180 634.8 595 58.8
PGR031G2270 Punica granatum HOM05D005308 ORTHO05D006494 6.7e-180 634.8 650 54.6
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 2.8e-178 629.4 640 55.8
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 3.7e-178 629.0 633 55.8
Ah.01g011450 Amaranthus hybridus HOM05D005308 ORTHO05D006494 4.8e-178 628.6 639 55.6
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 5.3e-177 625.2 623 55.5
Ca_13346_v3 Cicer arietinum L. HOM05D005308 ORTHO05D006494 7.0e-177 624.8 633 55.6
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 1.2e-176 624.0 641 54.9
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 2.0e-176 623.2 583 58.1
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 4.5e-176 622.1 632 54.6
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 6.5e-175 618.2 584 58.4
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 1.1e-174 617.5 618 55.0
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.5e-174 617.1 651 53.0
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 1.5e-174 617.1 631 54.5
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 7.2e-174 614.8 494 67.4
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 2.7e-173 612.8 495 65.3
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 5.2e-172 608.6 636 53.0
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 8.8e-172 607.8 624 55.1
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 8.3e-170 601.3 586 56.3
Nn3g19273 Nelumbo nucifera HOM05D005308 ORTHO05D006494 2.7e-168 596.3 584 56.2
TPR.G29756 Trifolium pratense HOM05D005308 ORTHO05D006494 7.7e-168 594.7 640 53.0
Peaxi162Scf00690g00113 Petunia axillaris HOM05D005308 ORTHO05D006494 1.7e-167 593.6 653 53.0
Oeu052497.1 Olea europaea HOM05D005308 ORTHO05D006494 5.0e-167 592.0 499 61.7
CSS0028044 Camellia sinensis var. sinensis HOM05D005308 ORTHO05D006494 4.2e-166 589.0 426 72.5
AUR62017754 Chenopodium quinoa HOM05D005308 ORTHO05D006494 2.7e-165 586.3 486 63.2
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 2.7e-165 586.3 600 55.7
Oeu016389.1 Olea europaea HOM05D005308 ORTHO05D006494 1.4e-164 583.9 578 56.2
SalBow5G1122 Salvia bowleyana HOM05D005308 ORTHO05D006494 1.4e-164 583.9 498 59.4
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 5.7e-163 578.6 589 54.3
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 2.2e-162 576.6 589 54.5
THA.LOC104813841 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 2.2e-162 576.6 644 51.7
MSTRG.23132 Avicennia marina HOM05D005308 ORTHO05D006494 7.7e-160 568.2 588 53.6
Thhalv10018268m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 2.5e-158 563.1 636 50.6
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 7.3e-158 561.6 621 51.9
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 6.1e-157 558.5 578 53.6
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 8.9e-156 554.7 633 49.4
Aa31LG7G4080 Aethionema arabicum HOM05D005308 ORTHO05D006494 7.5e-155 551.6 592 52.4
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 1.3e-154 550.8 629 51.4
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 4.6e-152 542.3 616 51.8
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 3.0e-151 539.7 635 49.4
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 3.9e-151 539.3 562 52.8
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 6.6e-151 538.5 567 52.9
AL2G35040 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 8.6e-151 538.1 616 51.1
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 1.6e-149 533.9 664 48.9
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.4e-148 530.8 590 50.2
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 1.4e-148 530.8 561 52.2
Sp1g17280 Schrenkiella parvula HOM05D005308 ORTHO05D006494 5.2e-148 528.9 584 50.7
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 9.8e-147 524.6 587 50.1
BcaB07g31957 Brassica carinata HOM05D005308 ORTHO05D006494 8.3e-146 521.5 574 51.4
MBI04_g27271_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.1e-145 521.2 648 48.0
BraA06t24665Z Brassica rapa HOM05D005308 ORTHO05D006494 1.9e-145 520.4 584 51.0
A06p15530 Brassica napus HOM05D005308 ORTHO05D006494 3.2e-145 519.6 584 50.9
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 4.6e-144 515.8 452 58.0
ECA246G5303 Erigeron canadensis HOM05D005308 ORTHO05D006494 1.9e-142 510.4 519 55.3
BolC5t30482H Brassica oleracea HOM05D005308 ORTHO05D006494 3.3e-142 509.6 451 57.6
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 3.3e-142 509.6 606 49.3
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 1.2e-141 507.7 605 49.1
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 1.2e-141 507.7 605 49.1
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 1.1e-140 504.6 613 47.8
A07p29040 Brassica napus HOM05D005308 ORTHO05D006494 2.0e-139 500.4 617 48.1
BcaB02g07009 Brassica carinata HOM05D005308 ORTHO05D006494 2.6e-139 500.0 613 48.9
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 2.6e-139 500.0 617 48.0
Thhalv10009294m.g Eutrema salsugineum HOM05D005308 ORTHO05D006494 2.9e-138 496.5 582 49.8
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 1.4e-137 494.2 586 47.1
Actinidia38015 Actinidia chinensis HOM05D005308 ORTHO05D006494 1.7e-135 487.3 607 49.9
SGA_v2.0_scaffold90G27910 Striga asiatica HOM05D005308 ORTHO05D006494 5.8e-131 472.2 626 45.5
MBI04_g21134_MAGBIO Magnolia biondii HOM05D005308 ORTHO05D006494 1.2e-128 464.5 630 45.2
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 7.3e-126 455.3 621 44.8
SHI08167 Sapria himalayana HOM05D005308 ORTHO05D006494 5.8e-123 445.7 530 48.7
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 1.9e-121 440.7 613 42.9
Os06g0115200 Oryza sativa ssp. japonica HOM05D005308 ORTHO05D006494 9.6e-102 375.2 615 38.4
Zm00001eb269050 Zea mays HOM05D005308 ORTHO05D006494 1.6e-101 374.4 614 38.4
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 1.2e-83 315.1 500 37.2
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 3.2e-81 307.0 505 38.6
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 2.7e-80 303.9 505 37.8
C05p17770 Brassica napus HOM05D005308 ORTHO05D006494 2.0e-78 297.7 245 59.6
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 3.7e-77 293.5 404 41.1
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 1.5e-75 288.1 487 37.2
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 5.9e-75 286.2 206 67.5
BcaNung07297 Brassica carinata HOM05D005308 ORTHO05D006494 6.7e-71 272.7 239 57.7
BcaNung07223 Brassica carinata HOM05D005308 ORTHO05D006494 1.0e-66 258.8 257 54.5
unitig_0.g1436 Utricularia gibba HOM05D005308 ORTHO05D006494 5.0e-66 256.5 292 48.6
unitig_0.g1437 Utricularia gibba HOM05D005308 ORTHO05D006494 1.9e-41 174.9 236 43.2
A07p29060 Brassica napus HOM05D005308 ORTHO05D006494 1.5e-33 148.7 127 58.3
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 3.3e-09 67.8 101 35.6
SHI17314 Sapria himalayana HOM05D005308 ORTHO05D006494 7.3e-09 66.6 76 48.7
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 2.0e-06 58.5 134 29.9


User provided reference genes

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