Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027114 Camellia sinensis var. sinensis HOM05D007102 ORTHO05D008950 4.8e-110 401.4 231 100.0
Dinv12295 Davidia involucrata HOM05D007102 ORTHO05D008950 1.2e-92 343.6 178 91.6
Hma1.2p1_0170F.1_g075400 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 1.0e-91 340.5 173 90.8
GSVIVG01024526001 Vitis vinifera HOM05D007102 ORTHO05D008950 9.4e-90 334.0 178 88.8
MELO3C019595.2 Cucumis melo HOM05D007102 ORTHO05D008950 4.7e-89 331.6 167 92.8
CsaV3_6G013250 Cucumis sativus L. HOM05D007102 ORTHO05D008950 4.7e-89 331.6 167 92.8
CANSAT54G0300 Cannabis sativa HOM05D007102 ORTHO05D008950 6.1e-89 331.3 171 90.6
TWI31G0907 Tripterygium wilfordii HOM05D007102 ORTHO05D008950 8.0e-89 330.9 174 89.7
MSTRG.21273 Avicennia marina HOM05D007102 ORTHO05D008950 1.4e-88 330.1 169 87.6
Cc01_g08950 Coffea canephora HOM05D007102 ORTHO05D008950 1.4e-88 330.1 172 87.2
vmacro14656 Vaccinium macrocarpon HOM05D007102 ORTHO05D008950 1.4e-88 330.1 169 89.3
Thecc.09G366000 Theobroma cacao HOM05D007102 ORTHO05D008950 2.3e-88 329.3 177 87.6
Nn2g10214 Nelumbo nucifera HOM05D007102 ORTHO05D008950 6.8e-88 327.8 173 87.3
Cfa011824 Carpinus fangiana HOM05D007102 ORTHO05D008950 1.2e-87 327.0 173 87.9
Haze_24461 Corylus avellana HOM05D007102 ORTHO05D008950 1.2e-87 327.0 171 88.3
Migut.D00799 Erythranthe guttata HOM05D007102 ORTHO05D008950 1.5e-87 326.6 169 86.4
Nitab4.5_0001856g0010 Nicotiana tabacum HOM05D007102 ORTHO05D008950 1.5e-87 326.6 167 89.2
MD03G1047200 Malus domestica HOM05D007102 ORTHO05D008950 2.0e-87 326.2 171 86.5
TAR624G0943 Trochodendron aralioides HOM05D007102 ORTHO05D008950 2.0e-87 326.2 170 88.8
Ca_15087_v3 Cicer arietinum L. HOM05D007102 ORTHO05D008950 2.6e-87 325.9 173 86.1
Rhsim01G0245100 Rhododendron simsii HOM05D007102 ORTHO05D008950 2.6e-87 325.9 169 88.2
MD11G1049700 Malus domestica HOM05D007102 ORTHO05D008950 3.4e-87 325.5 171 86.5
QL01p023619 Quercus lobata HOM05D007102 ORTHO05D008950 3.4e-87 325.5 171 88.3
Manes.18G123900 Manihot esculenta HOM05D007102 ORTHO05D008950 7.5e-87 324.3 171 90.1
Actinidia23827 Actinidia chinensis HOM05D007102 ORTHO05D008950 9.8e-87 323.9 175 86.3
Lalb_Chr20g0117241 Lupinus albus HOM05D007102 ORTHO05D008950 1.3e-86 323.6 174 87.4
Lj2C1106T0 Lonicera japonica HOM05D007102 ORTHO05D008950 2.2e-86 322.8 168 88.7
CiPaw.13G061600 Carya illinoinensis HOM05D007102 ORTHO05D008950 4.8e-86 321.6 164 91.5
Duzib168G2173 Durio zibethinus HOM05D007102 ORTHO05D008950 4.8e-86 321.6 174 85.6
Prupe.6G038400 Prunus persica HOM05D007102 ORTHO05D008950 4.8e-86 321.6 170 87.1
CDE07G1209 Ceratophyllum demersum HOM05D007102 ORTHO05D008950 1.1e-85 320.5 167 88.6
Medtr3g062890 Medicago truncatula HOM05D007102 ORTHO05D008950 1.4e-85 320.1 175 84.6
Peaxi162Scf00788g00047 Petunia axillaris HOM05D007102 ORTHO05D008950 1.4e-85 320.1 167 87.4
DCAR_021104 Daucus carota HOM05D007102 ORTHO05D008950 2.4e-85 319.3 174 83.3
ECA236G5009 Erigeron canadensis HOM05D007102 ORTHO05D008950 3.1e-85 318.9 174 85.1
CAN.G749.40 Capsicum annuum HOM05D007102 ORTHO05D008950 4.1e-85 318.5 167 86.2
Psat5g145240 Pisum sativum HOM05D007102 ORTHO05D008950 7.0e-85 317.8 173 86.1
Aqoxy5G01440 Aquilegia oxysepala HOM05D007102 ORTHO05D008950 9.1e-85 317.4 170 87.6
EL10Ac1g01074 Beta vulgaris HOM05D007102 ORTHO05D008950 9.1e-85 317.4 168 86.9
Potri.013G160600 Populus trichocarpa HOM05D007102 ORTHO05D008950 1.2e-84 317.0 172 87.2
Sopen09g032040 Solanum pennellii HOM05D007102 ORTHO05D008950 1.2e-84 317.0 167 86.2
PSO266G0014 Papaver somniferum HOM05D007102 ORTHO05D008950 1.6e-84 316.6 167 86.8
PSO384G1696 Papaver somniferum HOM05D007102 ORTHO05D008950 1.6e-84 316.6 167 86.8
unitig_0.g217 Utricularia gibba HOM05D007102 ORTHO05D008950 1.6e-84 316.6 171 83.6
Lsat_1_v5_gn_8_99200 Lactuca sativa HOM05D007102 ORTHO05D008950 2.0e-84 316.2 171 84.2
Solyc09g083150.4 Solanum lycopersicum HOM05D007102 ORTHO05D008950 2.0e-84 316.2 167 86.2
HanXRQChr16g0508431 Helianthus annuus HOM05D007102 ORTHO05D008950 3.5e-84 315.5 229 70.7
Glyma.11G201200 Glycine max HOM05D007102 ORTHO05D008950 4.5e-84 315.1 171 86.0
Glyma.18G049600 Glycine max HOM05D007102 ORTHO05D008950 5.9e-84 314.7 171 85.4
Gohir.D13G017200 Gossypium hirsutum HOM05D007102 ORTHO05D008950 5.9e-84 314.7 166 85.5
PGR042G3056 Punica granatum HOM05D007102 ORTHO05D008950 7.7e-84 314.3 174 81.6
PGSC0003DMG400006084 Solanum tuberosum HOM05D007102 ORTHO05D008950 7.7e-84 314.3 167 85.0
Eucgr.J01847 Eucalyptus grandis HOM05D007102 ORTHO05D008950 1.7e-83 313.2 167 87.4
TPR.G13817 Trifolium pratense HOM05D007102 ORTHO05D008950 1.7e-83 313.2 168 86.3
Lj6g0026798 Lotus japonicus HOM05D007102 ORTHO05D008950 2.3e-83 312.8 167 88.6
RcHm_v2.0_Chr5g0073911 Rosa chinensis HOM05D007102 ORTHO05D008950 2.3e-83 312.8 172 83.7
FvH4_3g41140 Fragaria vesca HOM05D007102 ORTHO05D008950 3.8e-83 312.0 165 86.7
FAN25G2933 Fragaria x ananassa HOM05D007102 ORTHO05D008950 5.0e-83 311.6 166 85.5
Gorai.013G019100 Gossypium raimondii HOM05D007102 ORTHO05D008950 5.0e-83 311.6 166 84.9
Sabra13G0128500 Salix brachista HOM05D007102 ORTHO05D008950 5.0e-83 311.6 172 85.5
FAN16G1418 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.5e-83 311.2 160 88.8
FAN21G1718 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.5e-83 311.2 160 88.8
Ciclev10002429m.g Citrus clementina HOM05D007102 ORTHO05D008950 1.5e-82 310.1 166 86.7
Ah.05g170720 Amaranthus hybridus HOM05D007102 ORTHO05D008950 5.5e-82 308.1 164 85.4
THA.LOC104819153 Tarenaya hassleriana HOM05D007102 ORTHO05D008950 9.5e-82 307.4 171 82.5
ClCG02G018940 Citrullus lanatus HOM05D007102 ORTHO05D008950 1.6e-81 306.6 155 92.3
AUR62027864 Chenopodium quinoa HOM05D007102 ORTHO05D008950 8.0e-81 304.3 168 83.9
VMungo0540G2371 Vigna mungo HOM05D007102 ORTHO05D008950 8.0e-81 304.3 171 84.2
AUR62019027 Chenopodium quinoa HOM05D007102 ORTHO05D008950 1.0e-80 303.9 168 84.5
Phvul.006G081700 Phaseolus vulgaris HOM05D007102 ORTHO05D008950 8.9e-80 300.8 171 83.6
Carub.0008s1880 Capsella rubella HOM05D007102 ORTHO05D008950 1.5e-79 300.1 171 81.9
CARHR272050 Cardamine hirsuta HOM05D007102 ORTHO05D008950 1.5e-79 300.1 167 84.4
Oeu005352.1 Olea europaea HOM05D007102 ORTHO05D008950 1.5e-79 300.1 162 88.9
MBI15_g05591_MAGBIO Magnolia biondii HOM05D007102 ORTHO05D008950 2.0e-79 299.7 197 75.1
BcaB01g04483 Brassica carinata HOM05D007102 ORTHO05D008950 4.4e-79 298.5 171 80.7
Nitab4.5_0007585g0040 Nicotiana tabacum HOM05D007102 ORTHO05D008950 7.5e-79 297.7 153 88.9
AL8G34360 Arabidopsis lyrata HOM05D007102 ORTHO05D008950 1.3e-78 297.0 167 82.6
AT5G58260 Arabidopsis thaliana HOM05D007102 ORTHO05D008950 2.2e-78 296.2 171 80.1
BcaB01g04537 Brassica carinata HOM05D007102 ORTHO05D008950 3.7e-78 295.4 171 80.7
BcaB01g04546 Brassica carinata HOM05D007102 ORTHO05D008950 3.7e-78 295.4 171 80.7
BolC3t13892H Brassica oleracea HOM05D007102 ORTHO05D008950 3.7e-78 295.4 171 80.7
Sp6g19920 Schrenkiella parvula HOM05D007102 ORTHO05D008950 3.7e-78 295.4 167 82.0
A03p12340 Brassica napus HOM05D007102 ORTHO05D008950 4.9e-78 295.0 171 80.1
C03p14490 Brassica napus HOM05D007102 ORTHO05D008950 4.9e-78 295.0 171 80.1
BraA03t10546Z Brassica rapa HOM05D007102 ORTHO05D008950 4.9e-78 295.0 171 80.1
Zm00001eb145680 Zea mays HOM05D007102 ORTHO05D008950 8.3e-78 294.3 181 76.2
Os01g0882500 Oryza sativa ssp. japonica HOM05D007102 ORTHO05D008950 1.4e-77 293.5 164 80.5
Sed0015928 Sechium edule HOM05D007102 ORTHO05D008950 1.8e-77 293.1 149 92.6
arahy.Tifrunner.gnm1.ann1.6T6LBL Arachis hypogaea HOM05D007102 ORTHO05D008950 5.4e-77 291.6 164 84.8
Atru.chr10.2354 Acer truncatum HOM05D007102 ORTHO05D008950 1.7e-75 286.6 152 88.8
Cpa.g.sc2.262 Carica papaya HOM05D007102 ORTHO05D008950 5.0e-75 285.0 151 86.1
ATR1127G111 Amborella trichopoda HOM05D007102 ORTHO05D008950 2.5e-74 282.7 151 88.1
Pp3c3_15360 Physcomitrium patens HOM05D007102 ORTHO05D008950 2.0e-68 263.1 169 70.4
Hund16865 Selenicereus undatus HOM05D007102 ORTHO05D008950 3.5e-68 262.3 176 72.7
Mapoly0073s0080 Marchantia polymorpha HOM05D007102 ORTHO05D008950 3.0e-67 259.2 167 73.7
Hma1.2p1_0170F.1_g075390 Hydrangea macrophylla HOM05D007102 ORTHO05D008950 2.3e-64 249.6 125 90.4
Gohir.A13G016100 Gossypium hirsutum HOM05D007102 ORTHO05D008950 9.8e-63 244.2 130 83.8
SMO119G0373 Selaginella moellendorffii HOM05D007102 ORTHO05D008950 3.0e-59 232.6 155 67.1
Aa31LG11G50 Aethionema arabicum HOM05D007102 ORTHO05D008950 9.5e-58 227.6 126 81.7
COL.COLO4_11231 Corchorus olitorius HOM05D007102 ORTHO05D008950 1.5e-55 220.3 118 85.6
Actinidia34510 Actinidia chinensis HOM05D007102 ORTHO05D008950 2.9e-54 216.1 113 87.6
FAN11G2493 Fragaria x ananassa HOM05D007102 ORTHO05D008950 6.4e-54 214.9 160 66.9
SEGI_29953 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 1.2e-47 194.1 136 66.2
Pp3c10_12660 Physcomitrium patens HOM05D007102 ORTHO05D008950 1.0e-43 181.0 130 64.6
arahy.Tifrunner.gnm1.ann1.S4JT24 Arachis hypogaea HOM05D007102 ORTHO05D008950 8.7e-43 177.9 164 58.5
CBR_g36846 Chara braunii HOM05D007102 ORTHO05D008950 5.6e-34 148.7 169 45.6
Thhalv10014691m.g Eutrema salsugineum HOM05D007102 ORTHO05D008950 2.9e-30 136.3 81 76.5
Haze_24494 Corylus avellana HOM05D007102 ORTHO05D008950 2.7e-28 129.8 173 45.7
CiPaw.13G061300 Carya illinoinensis HOM05D007102 ORTHO05D008950 5.8e-15 85.5 42 90.5
SEGI_39426 Sequoiadendron giganteum HOM05D007102 ORTHO05D008950 3.8e-14 82.8 47 76.6
A10p15960 Brassica napus HOM05D007102 ORTHO05D008950 5.0e-06 55.8 37 70.3


User provided reference genes

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