Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027100 Camellia sinensis var. sinensis HOM05D004153 ORTHO05D004678 8.6e-97 357.1 191 100.0
Rhsim01G0283900 Rhododendron simsii HOM05D004153 ORTHO05D004678 2.6e-45 186.0 206 50.0
FvH4_2g25400 Fragaria vesca HOM05D004153 ORTHO05D004678 1.0e-44 184.1 187 50.8
FAN24G2766 Fragaria x ananassa HOM05D004153 ORTHO05D004678 1.0e-44 184.1 187 50.8
Hma1.2p1_0209F.1_g088580 Hydrangea macrophylla HOM05D004153 ORTHO05D004678 1.9e-43 179.9 154 57.8
RcHm_v2.0_Chr6g0293581 Rosa chinensis HOM05D004153 ORTHO05D004678 1.9e-43 179.9 190 47.9
FAN15G2246 Fragaria x ananassa HOM05D000802 ORTHO05D001074 2.5e-43 179.5 187 49.2
FAN20G2301 Fragaria x ananassa HOM05D004153 ORTHO05D004678 4.2e-43 178.7 187 49.7
FAN15G0276 Fragaria x ananassa HOM05D004153 ORTHO05D004678 7.2e-43 177.9 187 49.2
FAN27G1399 Fragaria x ananassa HOM05D004153 ORTHO05D004678 1.0e-41 174.1 184 48.4
MD03G1285300 Malus domestica HOM05D004153 ORTHO05D004678 1.8e-41 173.3 152 53.3
Gorai.008G011200 Gossypium raimondii HOM05D004153 ORTHO05D004678 2.3e-41 172.9 188 48.4
Gohir.D12G011200 Gossypium hirsutum HOM05D004153 ORTHO05D004678 3.0e-41 172.6 188 48.4
Duzib138G0244 Durio zibethinus HOM05D004153 ORTHO05D004678 1.1e-40 170.6 195 46.7
Manes.04G056100 Manihot esculenta HOM05D004153 ORTHO05D004678 4.3e-40 168.7 157 52.9
Prupe.8G258500 Prunus persica HOM05D004153 ORTHO05D004678 5.7e-40 168.3 156 51.9
Gohir.A12G010800 Gossypium hirsutum HOM05D004153 ORTHO05D004678 9.7e-40 167.5 188 47.3
Potri.014G131400 Populus trichocarpa HOM05D004153 ORTHO05D004678 1.6e-39 166.8 161 52.2
Potri.002G206100 Populus trichocarpa HOM05D004153 ORTHO05D004678 2.8e-39 166.0 182 48.9
COL.COLO4_23373 Corchorus olitorius HOM05D004153 ORTHO05D004678 4.8e-39 165.2 157 51.6
TWI23G0022 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 1.1e-38 164.1 196 43.4
QL12p027168 Quercus lobata HOM05D004153 ORTHO05D004678 6.9e-38 161.4 190 43.7
CANSAT01G1893 Cannabis sativa HOM05D004153 ORTHO05D004678 1.5e-37 160.2 156 48.7
Sabra02G0153200 Salix brachista HOM05D004153 ORTHO05D004678 2.6e-37 159.5 162 50.0
PGR119G1654 Punica granatum HOM05D004153 ORTHO05D004678 3.4e-37 159.1 154 51.3
PGR119G2063 Punica granatum HOM05D004153 ORTHO05D004678 3.4e-37 159.1 154 51.3
Atru.chr5.1180 Acer truncatum HOM05D004153 ORTHO05D004678 5.9e-37 158.3 157 49.0
Cc01_g20660 Coffea canephora HOM05D004153 ORTHO05D004678 5.9e-37 158.3 156 51.9
CiPaw.07G106600 Carya illinoinensis HOM05D004153 ORTHO05D004678 1.7e-36 156.8 183 44.8
Manes.05G063900 Manihot esculenta HOM05D004153 ORTHO05D004678 2.9e-36 156.0 155 50.3
Lj1g0005892 Lotus japonicus HOM05D004153 ORTHO05D004678 3.8e-36 155.6 157 46.5
SalBow3G0249 Salvia bowleyana HOM05D004153 ORTHO05D004678 5.0e-36 155.2 156 49.4
Glyma.03G213300 Glycine max HOM05D004153 ORTHO05D004678 8.5e-36 154.5 158 48.1
Lalb_Chr15g0078571 Lupinus albus HOM05D004153 ORTHO05D004678 8.5e-36 154.5 163 46.0
Oeu030970.1 Olea europaea HOM05D004153 ORTHO05D004678 8.5e-36 154.5 157 49.0
DCAR_002817 Daucus carota HOM05D004153 ORTHO05D004678 1.1e-35 154.1 157 48.4
Aqoxy2G02983 Aquilegia oxysepala HOM05D004153 ORTHO05D004678 1.4e-35 153.7 159 48.4
Solyc09g074910.1 Solanum lycopersicum HOM05D004153 ORTHO05D004678 1.4e-35 153.7 156 48.1
Sopen09g029730 Solanum pennellii HOM05D004153 ORTHO05D004678 1.4e-35 153.7 156 48.1
VMungo1383G3271 Vigna mungo HOM05D004153 ORTHO05D004678 1.4e-35 153.7 159 47.2
EL10Ac6g15659 Beta vulgaris HOM05D004153 ORTHO05D004678 2.5e-35 152.9 156 46.2
PSO675G8366 Papaver somniferum HOM05D004153 ORTHO05D004678 3.2e-35 152.5 188 47.3
Thecc.01G297300 Theobroma cacao HOM05D004153 ORTHO05D004678 4.2e-35 152.1 157 48.4
Actinidia24837 Actinidia chinensis HOM05D004153 ORTHO05D004678 7.2e-35 151.4 110 63.6
Migut.D00197 Erythranthe guttata HOM05D004153 ORTHO05D004678 9.4e-35 151.0 156 48.1
Nitab4.5_0000619g0070 Nicotiana tabacum HOM05D004153 ORTHO05D004678 9.4e-35 151.0 156 48.1
Nitab4.5_0003901g0020 Nicotiana tabacum HOM05D004153 ORTHO05D004678 9.4e-35 151.0 156 48.1
Lj3P816T18 Lonicera japonica HOM05D004153 ORTHO05D004678 1.2e-34 150.6 153 45.8
THA.LOC104802169 Tarenaya hassleriana HOM05D004153 ORTHO05D004678 1.6e-34 150.2 148 48.6
PSO017G2667 Papaver somniferum HOM05D004153 ORTHO05D004678 2.1e-34 149.8 157 46.5
Phvul.001G205900 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 2.1e-34 149.8 159 49.1
Psat3g022920 Pisum sativum HOM05D004153 ORTHO05D004678 2.1e-34 149.8 164 45.7
CAN.G339.31 Capsicum annuum HOM05D004153 ORTHO05D004678 4.6e-34 148.7 156 47.4
PGSC0003DMG400035200 Solanum tuberosum HOM05D004153 ORTHO05D004678 4.6e-34 148.7 150 48.7
arahy.Tifrunner.gnm1.ann1.3INE6D Arachis hypogaea HOM05D004153 ORTHO05D004678 1.0e-33 147.5 148 46.6
Peaxi162Scf00067g00254 Petunia axillaris HOM05D004153 ORTHO05D004678 1.4e-33 147.1 156 48.1
Ciclev10022120m.g Citrus clementina HOM05D004153 ORTHO05D004678 1.8e-33 146.7 183 42.1
Haze_04898 Corylus avellana HOM05D004153 ORTHO05D004678 3.0e-33 146.0 151 51.7
Lsat_1_v5_gn_5_190540 Lactuca sativa HOM05D004153 ORTHO05D004678 3.0e-33 146.0 153 49.0
Ah.08g213200 Amaranthus hybridus HOM05D004153 ORTHO05D004678 8.8e-33 144.4 156 42.9
Cpa.g.sc9.210 Carica papaya HOM05D004153 ORTHO05D004678 2.0e-32 143.3 159 42.8
Lj1C0T8 Lonicera japonica HOM05D004153 ORTHO05D004678 2.0e-32 143.3 158 46.8
Lalb_Chr18g0047121 Lupinus albus HOM05D004153 ORTHO05D004678 2.0e-32 143.3 170 41.8
SGA_v2.0_scaffold2G01404 Striga asiatica HOM05D004153 ORTHO05D004678 2.6e-32 142.9 154 47.4
Ciclev10007035m.g Citrus clementina HOM05D004153 ORTHO05D004678 4.4e-32 142.1 152 45.4
Nn4g25841 Nelumbo nucifera HOM05D004153 ORTHO05D004678 5.7e-32 141.7 185 42.7
CANSAT78G0904 Cannabis sativa HOM05D004153 ORTHO05D004678 1.7e-31 140.2 157 40.1
HanXRQChr10g0284631 Helianthus annuus HOM05D004153 ORTHO05D004678 1.7e-31 140.2 153 44.4
unitig_0.g1178 Utricularia gibba HOM05D004153 ORTHO05D004678 1.7e-31 140.2 157 43.3
MBI18_g21824_MAGBIO Magnolia biondii HOM05D004153 ORTHO05D004678 2.8e-31 139.4 188 41.0
TAR365G1014 Trochodendron aralioides HOM05D004153 ORTHO05D004678 2.8e-31 139.4 138 49.3
Carub.0004s3048 Capsella rubella HOM05D004153 ORTHO05D004678 3.7e-31 139.0 156 42.9
Haze_01203 Corylus avellana HOM05D004153 ORTHO05D004678 4.8e-31 138.7 158 43.7
MD11G1304700 Malus domestica HOM05D004153 ORTHO05D004678 1.4e-30 137.1 101 60.4
Lsat_1_v5_gn_9_1141 Lactuca sativa HOM05D004153 ORTHO05D004678 1.8e-30 136.7 155 45.8
Lj3P819T20 Lonicera japonica HOM05D004153 ORTHO05D004678 1.8e-30 136.7 138 45.7
AUR62033157 Chenopodium quinoa HOM05D004153 ORTHO05D004678 2.4e-30 136.3 187 37.4
AUR62033169 Chenopodium quinoa HOM05D004153 ORTHO05D004678 2.4e-30 136.3 187 37.4
Lalb_Chr18g0051691 Lupinus albus HOM05D004153 ORTHO05D004678 2.4e-30 136.3 156 42.9
Medtr7g108650 Medicago truncatula HOM05D004153 ORTHO05D004678 2.4e-30 136.3 164 42.7
Nn5g27910 Nelumbo nucifera HOM05D004153 ORTHO05D004678 3.1e-30 136.0 157 44.6
TWI53G1241 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 3.1e-30 136.0 156 39.1
RcHm_v2.0_Chr4g0422241 Rosa chinensis HOM05D004153 ORTHO05D004678 4.1e-30 135.6 155 42.6
AT2G47770 Arabidopsis thaliana HOM05D004153 ORTHO05D004678 5.3e-30 135.2 156 41.7
Cfa005949 Carpinus fangiana HOM05D004153 ORTHO05D004678 9.1e-30 134.4 124 52.4
ClCG09G006030 Citrullus lanatus HOM05D004153 ORTHO05D004678 9.1e-30 134.4 157 45.2
BcaB06g29494 Brassica carinata HOM05D004153 ORTHO05D004678 1.2e-29 134.0 153 40.5
BcaB06g29497 Brassica carinata HOM05D004153 ORTHO05D004678 1.2e-29 134.0 153 40.5
BcaC02g06991 Brassica carinata HOM05D004153 ORTHO05D004678 1.2e-29 134.0 153 41.2
C04p72970 Brassica napus HOM05D004153 ORTHO05D004678 1.2e-29 134.0 153 41.2
BolC4t28778H Brassica oleracea HOM05D004153 ORTHO05D004678 1.2e-29 134.0 153 41.2
Atru.chr4.2837 Acer truncatum HOM05D004153 ORTHO05D004678 2.0e-29 133.3 160 40.6
AL4G47340 Arabidopsis lyrata HOM05D004153 ORTHO05D004678 2.6e-29 132.9 156 41.0
BcaB06g29496 Brassica carinata HOM05D004153 ORTHO05D004678 2.6e-29 132.9 149 41.6
BraA04t18942Z Brassica rapa HOM05D004153 ORTHO05D004678 3.4e-29 132.5 155 41.9
HPP92_016940 Vanilla planifolia HOM05D004153 ORTHO05D004678 4.5e-29 132.1 172 40.1
CARHR143140 Cardamine hirsuta HOM05D004153 ORTHO05D004678 7.7e-29 131.3 156 41.0
Thhalv10001647m.g Eutrema salsugineum HOM05D004153 ORTHO05D004678 2.2e-28 129.8 157 40.8
AUR62008617 Chenopodium quinoa HOM05D004153 ORTHO05D004678 2.9e-28 129.4 187 36.9
A04p35060 Brassica napus HOM05D004153 ORTHO05D004678 3.8e-28 129.0 155 40.6
Sp4g29700 Schrenkiella parvula HOM05D004153 ORTHO05D004678 3.8e-28 129.0 155 40.6
Aa31LG1G29110 Aethionema arabicum HOM05D004153 ORTHO05D004678 6.5e-28 128.3 159 38.4
Lj6g0000547 Lotus japonicus HOM05D004153 ORTHO05D004678 1.9e-27 126.7 158 41.1
FAN07G0961 Fragaria x ananassa HOM05D004153 ORTHO05D004678 4.2e-27 125.6 146 41.8
Glyma.09G044900 Glycine max HOM05D004153 ORTHO05D004678 4.2e-27 125.6 157 39.5
Glyma.15G147800 Glycine max HOM05D004153 ORTHO05D004678 7.2e-27 124.8 157 38.9
Sed0018454 Sechium edule HOM05D004153 ORTHO05D004678 9.4e-27 124.4 145 38.6
Eucgr.B01312 Eucalyptus grandis HOM05D004153 ORTHO05D004678 1.2e-26 124.0 155 36.1
Sed0026977 Sechium edule HOM05D004153 ORTHO05D004678 1.6e-26 123.6 153 41.8
TPR.G13834 Trifolium pratense HOM05D004153 ORTHO05D004678 2.1e-26 123.2 156 37.8
HanXRQChr01g0001291 Helianthus annuus HOM05D004153 ORTHO05D004678 4.7e-26 122.1 137 43.8
Thecc.04G284700 Theobroma cacao HOM05D004153 ORTHO05D004678 4.7e-26 122.1 156 39.7
Duzib052G0234 Durio zibethinus HOM05D004153 ORTHO05D004678 7.9e-26 121.3 156 38.5
Phvul.009G248000 Phaseolus vulgaris HOM05D004153 ORTHO05D004678 7.9e-26 121.3 156 39.1
EL10Ac3g06596 Beta vulgaris HOM05D004153 ORTHO05D004678 1.0e-25 120.9 155 37.4
Gorai.011G190200 Gossypium raimondii HOM05D004153 ORTHO05D004678 1.0e-25 120.9 156 39.1
ATR0796G004 Amborella trichopoda HOM05D004153 ORTHO05D004678 2.3e-25 119.8 177 39.5
Gohir.D10G170400 Gossypium hirsutum HOM05D004153 ORTHO05D004678 3.9e-25 119.0 156 37.8
Prupe.1G136800 Prunus persica HOM05D004153 ORTHO05D004678 3.9e-25 119.0 144 38.2
Gohir.A10G164100 Gossypium hirsutum HOM05D004153 ORTHO05D004678 6.7e-25 118.2 156 37.2
PGR031G1230 Punica granatum HOM05D004153 ORTHO05D004678 8.8e-25 117.9 157 34.4
Psat1g153880 Pisum sativum HOM05D004153 ORTHO05D004678 1.5e-24 117.1 155 37.4
VMungo1309G0390 Vigna mungo HOM05D004153 ORTHO05D004678 1.5e-24 117.1 156 37.8
MELO3C006663.2 Cucumis melo HOM05D004153 ORTHO05D004678 2.0e-24 116.7 153 39.2
TWI73G1192 Tripterygium wilfordii HOM05D004153 ORTHO05D004678 2.0e-24 116.7 144 38.9
CsaV3_3G014620 Cucumis sativus L. HOM05D004153 ORTHO05D004678 2.8e-23 112.8 150 38.0
Potri.010G025200 Populus trichocarpa HOM05D004153 ORTHO05D004678 2.8e-23 112.8 157 35.7
Actinidia21057 Actinidia chinensis HOM05D004153 ORTHO05D004678 3.7e-23 112.5 145 46.2
MELO3C016017.2 Cucumis melo HOM05D004153 ORTHO05D004678 6.3e-23 111.7 183 35.0
Sed0010104 Sechium edule HOM05D004153 ORTHO05D004678 6.3e-23 111.7 137 40.1
C04p00110 Brassica napus HOM05D004153 ORTHO05D004678 8.2e-23 111.3 153 38.6
Sc13g0003480 Simmondsia chinensis HOM05D004153 ORTHO05D004678 1.1e-22 110.9 156 40.4
Manes.03G195100 Manihot esculenta HOM05D004153 ORTHO05D004678 3.1e-22 109.4 145 36.6
BcaC02g12543 Brassica carinata HOM05D004153 ORTHO05D004678 4.1e-22 109.0 153 37.9
BolC4t21658H Brassica oleracea HOM05D004153 ORTHO05D004678 9.1e-22 107.8 153 37.3
Medtr2g436790 Medicago truncatula HOM05D004153 ORTHO05D004678 5.9e-21 105.1 155 36.8
CsaV3_7G029110 Cucumis sativus L. HOM05D004153 ORTHO05D004678 2.9e-20 102.8 117 41.9
Rhsim09G0027400 Rhododendron simsii HOM05D008235 ORTHO05D009358 2.5e-19 99.8 141 44.0
BraA05t19015Z Brassica rapa HOM05D004153 ORTHO05D004678 7.2e-19 98.2 153 35.3
CDE02G0764 Ceratophyllum demersum HOM05D004153 ORTHO05D004678 1.6e-18 97.1 121 43.8
A05p00190 Brassica napus HOM05D004153 ORTHO05D004678 6.1e-18 95.1 153 34.6
Rhsim09G0027200 Rhododendron simsii HOM05D041434 ORTHO05D004678 1.4e-17 94.0 138 42.0
Ca_01937_v3 Cicer arietinum L. HOM05D000639 ORTHO05D004019 1.8e-17 93.6 110 41.8
Rhsim07G0178900 Rhododendron simsii HOM05D035787 ORTHO05D004678 2.3e-17 93.2 158 38.0
RhsimUnG0080000 Rhododendron simsii HOM05D035787 ORTHO05D004678 2.3e-17 93.2 158 38.0
Rhsim04G0221600 Rhododendron simsii HOM05D004153 ORTHO05D004678 3.0e-17 92.8 153 34.6
Rhsim07G0194500 Rhododendron simsii HOM05D035787 ORTHO05D004678 3.0e-17 92.8 158 37.3
Sabra10G0013900 Salix brachista HOM05D004153 ORTHO05D004678 6.7e-17 91.7 116 43.1
BcaB02g08747 Brassica carinata HOM05D004153 ORTHO05D004678 2.0e-16 90.1 153 33.3
SEGI_18828 Sequoiadendron giganteum HOM05D004153 ORTHO05D004678 2.2e-15 86.7 155 31.0
AagrBONN_evm.TU.Sc2ySwM_362.296 Anthoceros agrestis HOM05D004153 ORTHO05D004678 7.0e-14 81.6 154 33.8
Dinv19716 Davidia involucrata HOM05D004153 ORTHO05D004678 5.9e-13 78.6 184 36.4
SMO115G0169 Selaginella moellendorffii HOM05D004153 ORTHO05D004678 5.9e-13 78.6 116 31.9
Lj1C32T8 Lonicera japonica HOM05D004153 ORTHO05D004678 2.2e-12 76.6 184 31.0
Os05g0151200 Oryza sativa ssp. japonica HOM05D004153 ORTHO05D004678 1.1e-11 74.3 155 31.6
Pp3c24_14170 Physcomitrium patens HOM05D004153 ORTHO05D004678 3.6e-10 69.3 154 32.5
Mapoly0050s0023 Marchantia polymorpha HOM05D004153 ORTHO05D004678 4.7e-10 68.9 150 30.7
Pp3c4_22190 Physcomitrium patens HOM05D004153 ORTHO05D004678 8.0e-10 68.2 145 31.7
Pp3c26_2060 Physcomitrium patens HOM05D004153 ORTHO05D004678 1.4e-09 67.4 111 34.2
Pp3c2_17540 Physcomitrium patens HOM05D004153 ORTHO05D004678 4.0e-09 65.9 148 29.7
Pp3c10_6760 Physcomitrium patens HOM05D004153 ORTHO05D004678 6.8e-09 65.1 158 28.5


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