Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027098 Camellia sinensis var. sinensis HOM05D007055 ORTHO05D008943 3.0e-82 308.5 163 100.0
Rhsim06G0238300 Rhododendron simsii HOM05D007055 ORTHO05D008943 1.0e-42 177.2 178 61.8
Actinidia07345 Actinidia chinensis HOM05D007055 ORTHO05D008943 5.9e-38 161.4 170 60.0
Cfa019436 Carpinus fangiana HOM05D007055 ORTHO05D008943 7.7e-38 161.0 157 58.0
CiPaw.12G045200 Carya illinoinensis HOM05D007055 ORTHO05D008943 2.5e-36 156.0 135 64.4
Atru.chr12.2186 Acer truncatum HOM05D007055 ORTHO05D008943 1.4e-34 150.2 107 72.9
arahy.Tifrunner.gnm1.ann1.4D1XNM Arachis hypogaea HOM05D007055 ORTHO05D008943 1.4e-34 150.2 139 59.7
DCAR_013747 Daucus carota HOM05D007055 ORTHO05D008943 4.0e-34 148.7 127 64.6
Solyc07g066370.3 Solanum lycopersicum HOM05D007055 ORTHO05D008943 4.0e-34 148.7 126 62.7
Peaxi162Scf00232g01121 Petunia axillaris HOM05D007055 ORTHO05D008943 5.2e-34 148.3 132 61.4
Sopen07g034550 Solanum pennellii HOM05D007055 ORTHO05D008943 6.8e-34 147.9 126 61.9
MSTRG.22977 Avicennia marina HOM05D007055 ORTHO05D008943 1.2e-33 147.1 110 71.8
arahy.Tifrunner.gnm1.ann1.FS1PG6 Arachis hypogaea HOM05D007055 ORTHO05D008943 1.5e-33 146.7 132 61.4
Lj3g0013500 Lotus japonicus HOM05D007055 ORTHO05D008943 2.0e-33 146.4 121 63.6
Lj5A202T45 Lonicera japonica HOM05D007055 ORTHO05D008943 2.6e-33 146.0 95 76.8
Manes.06G171200 Manihot esculenta HOM05D007055 ORTHO05D008943 2.6e-33 146.0 131 61.1
Hma1.2p1_0151F.1_g066890 Hydrangea macrophylla HOM05D007055 ORTHO05D008943 3.4e-33 145.6 112 70.5
PGR031G2131 Punica granatum HOM05D007055 ORTHO05D008943 5.7e-33 144.8 150 56.7
PGSC0003DMG400022130 Solanum tuberosum HOM05D007055 ORTHO05D008943 5.7e-33 144.8 132 56.8
Duzib168G0293 Durio zibethinus HOM05D007055 ORTHO05D008943 1.3e-32 143.7 125 60.8
Manes.06G170400 Manihot esculenta HOM05D007055 ORTHO05D008943 1.7e-32 143.3 128 61.7
Gohir.A05G073500 Gossypium hirsutum HOM05D007055 ORTHO05D008943 2.8e-32 142.5 123 65.0
Thecc.09G245700 Theobroma cacao HOM05D007055 ORTHO05D008943 2.8e-32 142.5 121 63.6
Ca_03690_v3 Cicer arietinum L. HOM05D007055 ORTHO05D008943 3.7e-32 142.1 120 62.5
Gohir.D05G076400 Gossypium hirsutum HOM05D007055 ORTHO05D008943 3.7e-32 142.1 110 70.0
Potri.011G144400 Populus trichocarpa HOM05D007055 ORTHO05D008943 3.7e-32 142.1 131 58.0
Sc03g0007920 Simmondsia chinensis HOM05D007055 ORTHO05D008943 3.7e-32 142.1 131 61.1
Aqoxy1G01599 Aquilegia oxysepala HOM05D007055 ORTHO05D008943 4.8e-32 141.7 107 70.1
Lsat_1_v5_gn_7_72120 Lactuca sativa HOM05D007055 ORTHO05D008943 4.8e-32 141.7 148 58.1
ECA240G0655 Erigeron canadensis HOM05D007055 ORTHO05D008943 6.3e-32 141.4 142 57.7
Phvul.005G056000 Phaseolus vulgaris HOM05D007055 ORTHO05D008943 8.3e-32 141.0 116 64.7
Migut.H02189 Erythranthe guttata HOM05D007055 ORTHO05D008943 1.1e-31 140.6 152 54.6
Oeu002805.1 Olea europaea HOM05D007055 ORTHO05D008943 1.8e-31 139.8 126 62.7
Cc05_g15950 Coffea canephora HOM05D007055 ORTHO05D008943 2.4e-31 139.4 135 57.8
Psat1g002720 Pisum sativum HOM05D007055 ORTHO05D008943 2.4e-31 139.4 132 60.6
Ciclev10022701m.g Citrus clementina HOM05D007055 ORTHO05D008943 5.4e-31 138.3 137 58.4
FvH4_3g16000 Fragaria vesca HOM05D007055 ORTHO05D008943 7.0e-31 137.9 135 56.3
Nn7g37868 Nelumbo nucifera HOM05D007055 ORTHO05D008943 7.0e-31 137.9 119 63.0
PSO675G8693 Papaver somniferum HOM05D007055 ORTHO05D008943 7.0e-31 137.9 124 58.1
SGA_v2.0_scaffold2G00966 Striga asiatica HOM05D007055 ORTHO05D008943 7.0e-31 137.9 110 64.5
COL.COLO4_07385 Corchorus olitorius HOM05D007055 ORTHO05D008943 9.1e-31 137.5 146 56.2
PSO541G2194 Papaver somniferum HOM05D007055 ORTHO05D008943 9.1e-31 137.5 124 58.1
RcHm_v2.0_Chr5g0026941 Rosa chinensis HOM05D007055 ORTHO05D008943 2.0e-30 136.3 134 53.0
SalBow5G4782 Salvia bowleyana HOM05D000091 ORTHO05D003024 2.0e-30 136.3 146 56.8
Glyma.08G173000 Glycine max HOM05D007055 ORTHO05D008943 2.7e-30 136.0 153 52.3
Sabra11G0128800 Salix brachista HOM05D007055 ORTHO05D008943 2.7e-30 136.0 96 70.8
Lalb_Chr25g0285111 Lupinus albus HOM05D007055 ORTHO05D008943 3.5e-30 135.6 130 58.5
TAR627G0757 Trochodendron aralioides HOM05D007055 ORTHO05D008943 3.5e-30 135.6 112 64.3
Gorai.009G077700 Gossypium raimondii HOM05D007055 ORTHO05D008943 4.5e-30 135.2 103 70.9
MBI18_g28200_MAGBIO Magnolia biondii HOM05D007055 ORTHO05D008943 7.7e-30 134.4 96 71.9
FAN11G2295 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.0e-29 134.0 119 59.7
Potri.008G043200 Populus trichocarpa HOM05D007055 ORTHO05D008943 1.0e-29 134.0 133 55.6
FAN21G0096 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.3e-29 133.7 119 59.7
Medtr2g069750 Medicago truncatula HOM05D007055 ORTHO05D008943 1.3e-29 133.7 145 57.2
FAN16G3461 Fragaria x ananassa HOM05D007055 ORTHO05D008943 1.7e-29 133.3 119 58.8
Hund02291 Selenicereus undatus HOM05D007055 ORTHO05D008943 1.7e-29 133.3 155 51.6
Glyma.15G254500 Glycine max HOM05D007055 ORTHO05D008943 2.9e-29 132.5 153 51.6
FAN21G3903 Fragaria x ananassa HOM05D007055 ORTHO05D008943 3.8e-29 132.1 119 58.8
CANSAT56G2639 Cannabis sativa HOM05D007055 ORTHO05D008943 5.0e-29 131.7 103 65.0
TWI38G0074 Tripterygium wilfordii HOM05D007055 ORTHO05D008943 5.0e-29 131.7 156 51.3
GSVIVG01020441001 Vitis vinifera HOM05D007055 ORTHO05D008943 8.6e-29 131.0 94 72.3
Manes.06G170801 Manihot esculenta HOM05D007055 ORTHO05D008943 1.9e-28 129.8 109 63.3
CAN.G943.31 Capsicum annuum HOM05D007055 ORTHO05D008943 2.5e-28 129.4 104 65.4
Sed0014529 Sechium edule HOM05D007055 ORTHO05D008943 4.2e-28 128.6 107 60.7
ATR1098G113 Amborella trichopoda HOM05D007055 ORTHO05D008943 9.5e-28 127.5 111 57.7
HanXRQChr13g0408571 Helianthus annuus HOM05D007055 ORTHO05D008943 1.2e-27 127.1 94 68.1
MD05G1216100 Malus domestica HOM05D007055 ORTHO05D008943 2.1e-27 126.3 109 62.4
Ah.06g187070 Amaranthus hybridus HOM05D007055 ORTHO05D008943 2.8e-27 125.9 145 52.4
Manes.06G169900 Manihot esculenta HOM05D007055 ORTHO05D008943 3.6e-27 125.6 123 56.9
AT1G79070 Arabidopsis thaliana HOM05D007055 ORTHO05D008943 4.7e-27 125.2 102 60.8
Thhalv10019307m.g Eutrema salsugineum HOM05D007055 ORTHO05D008943 4.7e-27 125.2 131 53.4
ClCG11G016330 Citrullus lanatus HOM05D007055 ORTHO05D008943 6.1e-27 124.8 144 50.0
MELO3C010559.2 Cucumis melo HOM05D007055 ORTHO05D008943 8.0e-27 124.4 144 48.6
CsaV3_4G031800 Cucumis sativus L. HOM05D007055 ORTHO05D008943 8.0e-27 124.4 150 48.0
Nitab4.5_0001749g0090 Nicotiana tabacum HOM05D007055 ORTHO05D008943 8.0e-27 124.4 146 50.7
CARHR072740 Cardamine hirsuta HOM05D007055 ORTHO05D008943 1.8e-26 123.2 125 54.4
THA.LOC104808116 Tarenaya hassleriana HOM05D007055 ORTHO05D008943 1.2e-25 120.6 139 51.8
Sp5g34120 Schrenkiella parvula HOM05D007055 ORTHO05D008943 1.5e-25 120.2 120 55.8
AL2G39530 Arabidopsis lyrata HOM05D007055 ORTHO05D008943 2.0e-25 119.8 132 50.8
Duzib150G0143 Durio zibethinus HOM05D007055 ORTHO05D008943 2.6e-25 119.4 93 66.7
BcaB02g08664 Brassica carinata HOM05D007055 ORTHO05D008943 5.7e-25 118.2 119 52.1
BolC6t40312H Brassica oleracea HOM05D007055 ORTHO05D008943 1.3e-24 117.1 102 55.9
EL10Ac4g08563 Beta vulgaris HOM05D007055 ORTHO05D008943 1.7e-24 116.7 109 56.9
BcaC08g47470 Brassica carinata HOM05D007055 ORTHO05D008943 3.7e-24 115.5 102 54.9
A07p44210 Brassica napus HOM05D007055 ORTHO05D008943 4.9e-24 115.2 102 54.9
C06p52940 Brassica napus HOM05D007055 ORTHO05D008943 1.4e-23 113.6 90 62.2
unitig_699.g19681 Utricularia gibba HOM05D007055 ORTHO05D008943 1.4e-23 113.6 104 59.6
AUR62044625 Chenopodium quinoa HOM05D007055 ORTHO05D008943 4.1e-23 112.1 84 63.1
BraA07t31929Z Brassica rapa HOM05D007055 ORTHO05D008943 5.4e-23 111.7 90 61.1
Eucgr.F03184 Eucalyptus grandis HOM05D007055 ORTHO05D008943 5.4e-23 111.7 94 62.8
Aa31LG4G1920 Aethionema arabicum HOM05D007055 ORTHO05D008943 9.2e-23 110.9 104 54.8
Prupe.4G143100 Prunus persica HOM05D007055 ORTHO05D008943 1.2e-22 110.5 95 61.1
BcaNung04909 Brassica carinata HOM05D007055 ORTHO05D008943 1.6e-22 110.2 106 54.7
HPP92_002254 Vanilla planifolia HOM05D007055 ORTHO05D008943 1.6e-22 110.2 78 71.8
Carub.0002s2594 Capsella rubella HOM05D007055 ORTHO05D008943 7.8e-22 107.8 120 50.8
CDE12G0729 Ceratophyllum demersum HOM05D007055 ORTHO05D008943 1.0e-21 107.5 148 44.6
Manes.06G170100 Manihot esculenta HOM05D007055 ORTHO05D008943 1.0e-21 107.5 89 61.8
AUR62043058 Chenopodium quinoa HOM05D007055 ORTHO05D008943 1.5e-20 103.6 158 39.2
Manes.06G171100 Manihot esculenta HOM05D007055 ORTHO05D008943 3.3e-20 102.4 74 68.9
SalBow5G1530 Salvia bowleyana HOM05D000091 ORTHO05D003024 3.3e-20 102.4 83 67.5
vmacro11656 Vaccinium macrocarpon HOM05D007055 ORTHO05D008943 3.6e-19 99.0 220 40.5
SHI01886 Sapria himalayana HOM05D007055 ORTHO05D008943 1.8e-18 96.7 95 57.9
BcaC08g45387 Brassica carinata HOM05D007055 ORTHO05D008943 6.8e-18 94.7 122 45.9
Pp3c15_3290 Physcomitrium patens HOM05D007055 ORTHO05D008943 6.8e-18 94.7 93 51.6
Mapoly0112s0058 Marchantia polymorpha HOM05D007055 ORTHO05D008943 2.6e-17 92.8 89 52.8
TPR.G9749 Trifolium pratense HOM05D007055 ORTHO05D008943 4.4e-17 92.0 61 73.8
Zm00001eb173230 Zea mays HOM05D007055 ORTHO05D008943 5.8e-17 91.7 130 40.0
CBR_g41533 Chara braunii HOM05D000019 ORTHO05D000048 2.2e-16 89.7 131 38.9
Os08g0129900 Oryza sativa ssp. japonica HOM05D007055 ORTHO05D008943 2.2e-16 89.7 97 46.4
Nitab4.5_0007742g0030 Nicotiana tabacum HOM05D007055 ORTHO05D008943 2.9e-16 89.4 80 60.0
SMO367G1177 Selaginella moellendorffii HOM05D007055 ORTHO05D008943 7.8e-14 81.3 139 40.3
AagrBONN_evm.TU.Sc2ySwM_228.2782 Anthoceros agrestis HOM05D007055 ORTHO05D008943 1.6e-11 73.6 92 42.4
Haze_08531 Corylus avellana HOM05D007055 ORTHO05D008943 1.2e-06 57.4 90 42.2


User provided reference genes

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