Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027095 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 4.0e-180 634.8 355 100.0
CSS0016721 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 2.2e-154 549.3 360 89.4
CSS0038644 Camellia sinensis var. sinensis HOM05D037884 ORTHO05D005895 2.2e-154 549.3 360 89.4
Actinidia25244 Actinidia chinensis HOM05D006920 ORTHO05D005895 2.3e-79 300.1 359 57.9
Rhsim05G0018400 Rhododendron simsii HOM05D006920 ORTHO05D005895 2.3e-47 193.7 365 45.8
vmacro17256 Vaccinium macrocarpon HOM05D006920 ORTHO05D005895 1.7e-45 187.6 395 44.1
Dinv36779 Davidia involucrata HOM05D006920 ORTHO05D005895 5.4e-44 182.6 281 45.6
GSVIVG01015184001 Vitis vinifera HOM05D006920 ORTHO05D005895 2.4e-36 157.1 394 37.3
Hma1.2p1_0169F.1_g074930 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 2.5e-33 147.1 365 42.5
Dinv42334 Davidia involucrata HOM05D006920 ORTHO05D005895 1.4e-31 141.4 219 43.4
Haze_25928 Corylus avellana HOM05D006920 ORTHO05D005895 3.4e-30 136.7 386 34.5
Cfa003067 Carpinus fangiana HOM05D006920 ORTHO05D005895 1.7e-29 134.4 389 33.7
QL02p062309 Quercus lobata HOM05D006920 ORTHO05D005895 1.3e-24 118.2 393 31.8
DCAR_031337 Daucus carota HOM05D006920 ORTHO05D005895 6.9e-23 112.5 386 31.9
DCAR_015050 Daucus carota HOM05D006920 ORTHO05D005895 2.6e-22 110.5 377 32.4
Oeu064585.1 Olea europaea HOM05D006920 ORTHO05D005895 2.2e-21 107.5 375 32.5
Cc06_g11560 Coffea canephora HOM05D006920 ORTHO05D005895 4.2e-20 103.2 348 30.7
Hma1.2p1_0476F.1_g160830 Hydrangea macrophylla HOM05D006920 ORTHO05D005895 9.3e-20 102.1 226 38.9
Atru.chr7.1617 Acer truncatum HOM05D006920 ORTHO05D005895 5.1e-18 96.3 391 33.5
Ciclev10007413m.g Citrus clementina HOM05D006920 ORTHO05D005895 8.7e-18 95.5 310 32.3
TAR383G0297 Trochodendron aralioides HOM05D006920 ORTHO05D005895 1.8e-15 87.8 185 36.2
TWI63G0676 Tripterygium wilfordii HOM05D006920 ORTHO05D005895 5.3e-15 86.3 345 30.4
CANSAT56G3092 Cannabis sativa HOM05D006920 ORTHO05D005895 5.8e-14 82.8 334 30.2
Potri.006G148400 Populus trichocarpa HOM05D006920 ORTHO05D005895 2.4e-12 77.4 393 29.0
Sabra06G0117400 Salix brachista HOM05D006920 ORTHO05D005895 1.2e-11 75.1 387 29.7
Peaxi162Scf00028g00415 Petunia axillaris HOM05D006920 ORTHO05D005895 5.1e-10 69.7 362 28.7
Manes.01G178200 Manihot esculenta HOM05D006920 ORTHO05D005895 4.3e-09 66.6 331 29.3
Duzib150G1610 Durio zibethinus HOM05D006920 ORTHO05D005895 6.2e-08 62.8 334 29.3
SalBow6G1737 Salvia bowleyana HOM05D006920 ORTHO05D005895 2.4e-07 60.8 302 29.5
Thecc.09G086800 Theobroma cacao HOM05D006920 ORTHO05D005895 3.1e-07 60.5 316 27.5
CiPaw.03G213600 Carya illinoinensis HOM05D006920 ORTHO05D005895 1.0e-05 55.5 247 26.3


User provided reference genes

Program Settings