Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 6.7e-160 567.4 306 100.0
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 1.1e-109 400.6 304 68.1
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 4.1e-109 398.7 306 71.2
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 5.4e-109 398.3 305 69.8
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.2e-108 397.1 306 68.0
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.3e-106 389.0 345 62.6
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.3e-106 388.7 304 67.1
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 5.6e-106 388.3 304 68.4
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 5.6e-106 388.3 306 67.6
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 3.6e-105 385.6 306 68.6
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.4e-104 383.6 311 65.0
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.4e-104 383.6 311 65.0
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.0e-104 382.1 311 65.0
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 6.8e-104 381.3 311 64.6
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.8e-104 381.3 306 65.7
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 8.9e-104 380.9 307 64.8
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 1.5e-103 380.2 306 67.0
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 2.0e-103 379.8 253 76.3
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 2.6e-103 379.4 307 66.8
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 4.4e-103 378.6 308 65.3
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 7.5e-103 377.9 306 68.0
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 1.7e-102 376.7 306 65.0
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 3.7e-102 375.6 307 64.5
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 6.4e-102 374.8 304 68.1
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 2.4e-101 372.9 306 65.7
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 4.1e-101 372.1 307 64.2
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.4e-101 371.7 306 65.0
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 7.1e-101 371.3 308 64.6
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 7.1e-101 371.3 310 66.1
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 9.2e-101 370.9 304 63.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 1.6e-100 370.2 306 65.7
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.7e-100 369.4 307 67.1
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 6.0e-100 368.2 304 63.5
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.0e-99 367.5 306 67.3
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 5.1e-99 365.2 306 61.1
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 6.6e-99 364.8 310 65.5
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 2.5e-98 362.8 305 65.2
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 3.3e-98 362.5 309 61.8
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 4.3e-98 362.1 306 61.8
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 4.3e-98 362.1 306 67.0
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 5.6e-98 361.7 305 61.3
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 9.5e-98 360.9 306 64.1
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 1.1e-96 357.5 306 61.1
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 1.8e-96 356.7 311 64.0
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 1.8e-96 356.7 305 61.6
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 8.9e-96 354.4 306 61.8
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 1.5e-95 353.6 317 59.6
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.3e-94 350.5 304 59.5
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 2.2e-94 349.7 305 58.7
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 3.8e-94 349.0 305 58.0
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 6.4e-94 348.2 317 60.3
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 1.1e-93 347.4 305 59.3
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 1.1e-93 347.4 305 59.3
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 7.1e-93 344.7 306 59.8
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 7.8e-92 341.3 308 58.8
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 7.8e-92 341.3 308 58.4
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 2.3e-91 339.7 307 62.5
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 3.0e-91 339.3 316 58.2
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 3.9e-91 339.0 316 58.5
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 6.6e-91 338.2 305 57.4
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 8.7e-91 337.8 313 59.1
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 2.5e-90 336.3 309 63.8
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 9.6e-90 334.3 308 64.9
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 1.6e-89 333.6 316 57.6
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 3.6e-89 332.4 315 58.4
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 4.7e-89 332.0 316 57.6
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 4.7e-89 332.0 306 60.8
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 8.1e-89 331.3 316 57.3
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 8.1e-89 331.3 316 57.3
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.1e-88 330.9 304 57.6
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 1.8e-88 330.1 316 57.0
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 1.8e-88 330.1 316 57.0
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 1.8e-88 330.1 303 57.1
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 3.1e-88 329.3 316 57.0
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 5.3e-88 328.6 307 59.6
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 9.0e-88 327.8 311 63.3
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 1.7e-86 323.6 317 57.4
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 2.2e-86 323.2 308 57.8
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 1.4e-85 320.5 306 57.5
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 1.6e-84 317.0 308 59.4
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 2.7e-84 316.2 315 55.2
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 7.8e-84 314.7 308 56.5
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 1.0e-83 314.3 306 60.1
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 5.1e-83 312.0 312 55.8
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 6.6e-83 311.6 307 55.4
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 4.8e-81 305.4 295 56.9
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.4e-80 303.9 265 58.9
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 9.0e-80 301.2 278 59.0
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.5e-79 300.4 307 59.3
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 4.5e-79 298.9 264 57.2
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 5.8e-79 298.5 306 59.5
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 3.8e-78 295.8 206 72.8
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 3.8e-78 295.8 304 56.2
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 9.3e-77 291.2 257 58.0
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 2.5e-74 283.1 303 56.8
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 6.2e-73 278.5 309 56.0
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 1.4e-72 277.3 307 55.4
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 1.5e-71 273.9 203 67.0
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 1.9e-69 266.9 278 54.3
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 2.8e-65 253.1 318 47.8
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 6.9e-64 248.4 242 59.1
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 1.6e-60 237.3 233 53.6
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.4e-56 223.4 305 49.2
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 1.7e-49 200.7 271 46.9
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.8e-49 199.9 134 76.1
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 6.9e-48 195.3 277 49.1
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 6.9e-48 195.3 188 62.2
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 9.1e-48 194.9 304 42.8
AagrBONN_evm.TU.Sc2ySwM_117.3541 Anthoceros agrestis HOM05D000974 ORTHO05D007456 1.3e-46 191.0 270 44.1
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 1.6e-44 184.1 208 55.8
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 1.0e-43 181.4 307 42.0
Mapoly0123s0011 Marchantia polymorpha HOM05D000974 ORTHO05D007456 2.6e-39 166.8 263 39.2
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 2.2e-38 163.7 119 69.7
Pp3c2_19140 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.7e-36 156.8 313 36.1
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 3.6e-36 156.4 110 75.5
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 6.7e-35 152.1 126 63.5
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.6e-34 150.2 143 60.1
SMO347G0394 Selaginella moellendorffii HOM05D000974 ORTHO05D007456 1.3e-33 147.9 285 37.2
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 6.3e-33 145.6 193 45.6
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.5e-31 139.8 177 46.3
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.7e-30 137.5 177 45.8
Lalb_Chr08g0240551 Lupinus albus HOM05D000974 ORTHO05D007456 6.1e-28 129.0 124 53.2
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 1.4e-27 127.9 311 33.8
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 2.3e-27 127.1 120 57.5
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 1.6e-20 104.4 128 57.8
Pp3c3_31670 Physcomitrium patens HOM05D000974 ORTHO05D007456 2.1e-20 104.0 157 39.5
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 3.0e-19 100.1 150 42.0
TAR629G1462 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.8e-16 90.9 103 45.6
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 5.4e-16 89.4 101 47.5
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 8.6e-14 82.0 101 50.5
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 3.7e-09 66.6 88 53.4
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 7.8e-07 58.9 75 53.3


User provided reference genes

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