Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 8.4e-95 350.5 200 100.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 8.3e-50 201.1 208 62.0
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.1e-49 200.7 202 63.4
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.4e-49 200.3 208 60.6
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 3.5e-48 195.7 210 60.5
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 3.3e-46 189.1 208 61.1
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 7.2e-46 188.0 201 57.2
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.2e-45 187.2 221 57.9
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 6.1e-45 184.9 206 55.3
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 8.0e-45 184.5 212 58.5
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.2e-44 181.8 200 57.0
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.5e-43 180.3 220 54.5
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 3.4e-43 179.1 200 56.5
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 4.4e-43 178.7 218 53.7
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 5.7e-43 178.3 208 57.2
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 9.8e-43 177.6 201 58.2
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 1.3e-42 177.2 206 57.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 1.7e-42 176.8 202 55.9
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 6.3e-42 174.9 206 55.8
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.1e-41 174.1 204 56.4
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 7.0e-41 171.4 201 55.2
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 1.6e-40 170.2 204 55.4
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.6e-40 170.2 215 52.6
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.7e-40 169.5 211 51.2
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 2.7e-40 169.5 211 51.2
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 2.7e-40 169.5 217 51.6
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 5.9e-40 168.3 210 59.5
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 7.8e-40 167.9 202 53.0
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 7.8e-40 167.9 214 52.8
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.7e-39 166.8 191 58.1
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.1e-38 164.1 221 49.8
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 1.9e-38 163.3 221 49.3
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.9e-38 163.3 221 49.3
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 2.5e-38 162.9 211 53.6
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 5.6e-38 161.8 220 51.4
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 2.1e-37 159.8 184 60.9
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.8e-37 159.5 194 55.2
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 3.0e-36 156.0 197 51.8
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 8.9e-36 154.5 210 49.0
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 2.0e-35 153.3 236 49.6
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 4.4e-35 152.1 199 50.8
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 1.7e-34 150.2 201 50.2
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 4.9e-34 148.7 205 49.8
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 4.9e-34 148.7 198 55.1
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 6.4e-34 148.3 223 47.5
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.1e-33 147.5 191 50.3
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-33 146.4 195 51.3
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 3.2e-33 146.0 201 48.3
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 5.4e-33 145.2 217 48.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 7.0e-33 144.8 207 46.4
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 7.0e-33 144.8 212 46.2
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 1.6e-32 143.7 215 52.1
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 2.7e-32 142.9 204 48.0
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 3.5e-32 142.5 208 46.6
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 7.8e-32 141.4 198 49.5
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 1.0e-31 141.0 201 47.8
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 5.0e-31 138.7 200 47.0
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 8.6e-31 137.9 221 47.5
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 8.6e-31 137.9 193 49.2
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.5e-30 137.1 197 47.2
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 2.5e-30 136.3 193 50.8
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.5e-30 136.3 204 46.6
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 9.5e-30 134.4 205 44.9
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.2e-29 131.7 142 61.3
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.1e-28 131.0 196 45.9
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 1.4e-28 130.6 194 45.9
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 3.1e-28 129.4 192 45.3
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 3.1e-28 129.4 230 44.3
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 4.0e-28 129.0 213 45.5
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 1.7e-26 123.6 245 40.0
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 2.9e-26 122.9 203 46.3
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 6.4e-26 121.7 184 47.8
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 6.4e-26 121.7 200 47.0
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 8.3e-26 121.3 176 46.6
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 8.3e-26 121.3 213 45.1
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 1.9e-25 120.2 193 46.1
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 5.4e-25 118.6 205 44.4
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.4e-25 118.6 173 44.5
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 9.2e-25 117.9 183 47.0
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 7.8e-24 114.8 184 46.7
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 6.6e-23 111.7 182 46.2
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 2.5e-22 109.8 111 57.7
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 3.3e-22 109.4 242 39.7
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 8.1e-21 104.8 159 49.7
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.4e-20 104.0 187 42.2
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 8.9e-20 101.3 200 44.5
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 2.6e-19 99.8 107 54.2
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.7e-18 97.1 198 41.9
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 2.9e-18 96.3 210 35.7
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 2.4e-17 93.2 190 38.4
Manes.15G067900 Manihot esculenta HOM05D007542 ORTHO05D009519 6.0e-16 88.6 144 49.3
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 1.9e-14 83.6 151 38.4
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 5.6e-14 82.0 154 39.6
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 9.9e-11 71.2 179 36.9
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 1.3e-07 60.8 225 32.0
ATR0317G118 Amborella trichopoda HOM05D007542 ORTHO05D009519 3.0e-07 59.7 64 48.4
SEGI_03822 Sequoiadendron giganteum HOM05D007542 ORTHO05D009519 6.6e-07 58.5 46 56.5
ATR0772G056 Amborella trichopoda HOM05D007542 ORTHO05D009519 1.5e-06 57.4 64 48.4


User provided reference genes

Program Settings