Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027057 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 9.6e-273 943.0 498 100.0
CSS0045163 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.0e-181 640.6 511 69.7
CSS0019235 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 3.3e-180 635.6 511 69.3
CSS0045513 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.7e-173 613.2 473 69.3
CSS0018925 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 4.4e-153 545.4 490 64.1
CSS0017336 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 6.9e-37 159.5 188 45.2
CSS0000183 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 1.5e-36 158.3 188 44.7
CSS0011427 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000589 2.6e-36 157.5 187 44.9
CSS0020048 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000352 4.5e-36 156.8 188 44.7
CSS0028660 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D000589 1.3e-35 155.2 161 49.1
CSS0022071 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D012208 5.4e-34 149.8 168 45.8
CSS0015130 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 5.8e-28 129.8 251 35.9
CSS0007065 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 9.0e-13 79.3 70 54.3
CSS0013817 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.2e-12 79.0 89 46.1
CSS0025772 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.3e-11 75.5 70 52.9
CSS0003582 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 1.1e-10 72.4 77 46.8
CSS0006552 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 4.6e-09 67.0 72 48.6
CSS0039727 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 1.3e-08 65.5 48 66.7
Sopen01g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 3.9e-08 63.9 131 31.3
CSS0039158 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 8.7e-08 62.8 48 60.4
vmacro07682 Vaccinium macrocarpon HOM05D000026 ORTHO05D000127 8.7e-08 62.8 113 32.7
CSS0040181 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 3.3e-07 60.8 48 58.3
Sopen04g012100 Solanum pennellii HOM05D000047 ORTHO05D000044 5.7e-07 60.1 126 32.5
CSS0018264 Camellia sinensis var. sinensis HOM05D010691 ORTHO05D008628 7.4e-07 59.7 59 50.8
Sopen11g013160 Solanum pennellii HOM05D000047 ORTHO05D000044 9.7e-07 59.3 113 31.9
Sopen10g020130 Solanum pennellii HOM05D000047 ORTHO05D000589 1.3e-06 58.9 83 34.9
CSS0005344 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 1.6e-06 58.5 48 58.3
Sopen11g014160 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-06 58.5 93 35.5
CSS0023440 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 2.2e-06 58.2 48 60.4
CSS0017844 Camellia sinensis var. sinensis HOM05D014103 ORTHO05D000352 3.7e-06 57.4 48 58.3
Sopen01g019870 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-06 57.0 84 34.5
Sopen01g025260 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-06 57.0 196 26.5
Sopen01g017440 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-06 56.6 80 33.8
Sopen05g014250 Solanum pennellii HOM05D000047 ORTHO05D000044 6.3e-06 56.6 80 33.8
Sopen11g013110 Solanum pennellii HOM05D000047 ORTHO05D000589 6.3e-06 56.6 80 33.8


User provided reference genes

Program Settings