Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 0.0e+00 1143.6 602 100.0
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 8.3e-255 883.6 604 77.2
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 6.8e-249 864.0 605 75.0
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 1.0e-244 850.1 607 75.6
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 6.4e-239 830.9 619 70.0
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.4e-238 829.7 606 74.6
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.9e-238 829.3 609 71.1
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 3.2e-238 828.6 608 74.0
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 2.1e-237 825.9 604 71.2
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 5.3e-233 811.2 610 71.5
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.3e-231 806.6 606 73.3
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 7.1e-230 800.8 631 66.9
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.9e-228 795.0 610 70.7
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 1.3e-226 790.0 609 70.6
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 3.6e-226 788.5 609 70.6
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 7.1e-222 774.2 607 67.5
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 7.9e-221 770.8 600 65.7
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 6.7e-220 767.7 615 65.2
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 4.3e-219 765.0 610 67.4
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.3e-218 763.5 600 69.5
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 1.1e-217 760.4 609 65.5
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 2.4e-217 759.2 616 67.7
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 6.9e-217 757.7 606 66.7
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 1.1e-214 750.4 608 66.4
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 1.9e-214 749.6 607 66.1
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.2e-214 748.8 615 67.3
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 9.3e-214 747.3 604 64.9
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.1e-213 746.1 613 62.8
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.7e-213 745.7 607 66.9
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.6e-213 745.0 611 63.0
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 1.0e-212 743.8 616 66.2
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 1.8e-212 743.0 618 67.6
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 3.0e-212 742.3 617 63.4
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.5e-211 739.2 611 62.5
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 9.6e-211 737.3 610 65.9
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 8.2e-210 734.2 610 66.1
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 2.4e-209 732.6 603 65.2
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 1.2e-208 730.3 607 63.6
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 2.6e-208 729.2 608 64.3
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 7.6e-208 727.6 604 65.6
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.2e-207 726.1 610 63.6
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 2.9e-207 725.7 607 65.6
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 6.5e-207 724.5 598 64.9
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.2e-205 720.3 633 60.3
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 7.9e-205 717.6 609 64.2
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 2.3e-204 716.1 626 63.4
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 6.7e-204 714.5 625 63.8
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 2.5e-203 712.6 615 60.7
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 6.3e-202 708.0 614 61.7
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.8e-201 706.4 490 77.8
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.4e-201 706.1 611 61.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 2.0e-200 703.0 609 62.1
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 3.8e-199 698.7 611 59.6
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 5.0e-199 698.4 607 59.6
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 6.5e-199 698.0 602 61.3
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 3.2e-198 695.7 618 60.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 2.1e-197 693.0 620 61.1
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 4.6e-197 691.8 618 59.2
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 6.1e-197 691.4 623 61.8
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 7.9e-197 691.0 621 60.9
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 7.9e-197 691.0 630 59.8
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 7.9e-197 691.0 619 59.0
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 1.4e-196 690.3 620 59.4
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 3.9e-196 688.7 495 71.7
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 5.1e-196 688.3 592 61.3
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.5e-195 686.8 620 60.8
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.5e-195 686.8 627 60.6
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 3.3e-195 685.6 612 60.0
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 6.3e-194 681.4 617 62.2
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 6.3e-194 681.4 596 64.1
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 8.2e-194 681.0 606 60.1
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 4.1e-193 678.7 617 57.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 4.5e-192 675.2 568 65.3
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 3.8e-191 672.2 616 59.9
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 3.8e-191 672.2 620 58.9
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 8.5e-191 671.0 616 59.4
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 8.5e-191 671.0 616 58.4
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 1.4e-190 670.2 618 58.7
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 7.2e-190 667.9 623 58.4
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 6.1e-189 664.8 631 58.0
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 1.8e-188 663.3 613 58.1
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 1.8e-188 663.3 613 58.1
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 3.9e-188 662.1 619 57.5
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 8.8e-188 661.0 625 57.0
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.2e-186 656.4 541 62.7
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 8.2e-186 654.4 542 64.8
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.1e-185 654.1 628 58.8
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.0e-183 647.5 542 64.6
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 8.5e-183 644.4 614 56.5
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.0e-180 637.5 483 66.9
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.2e-178 629.8 623 56.3
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-172 610.5 619 55.9
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 2.5e-166 589.7 616 56.3
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 7.0e-161 571.6 648 50.5
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 5.0e-151 538.9 630 48.9
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.3e-143 514.2 437 60.2
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 9.5e-142 508.1 535 50.7
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 1.6e-141 507.3 539 50.6
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 4.7e-141 505.8 314 72.0
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.9e-137 493.8 417 65.9
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 2.8e-109 400.2 340 63.8
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 4.6e-104 382.9 341 63.6
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 3.9e-79 300.1 473 36.6
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.1e-49 202.2 547 34.9
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 5.7e-46 189.9 477 34.6
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.2e-43 182.2 248 38.3
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 3.5e-43 180.6 248 38.3
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 1.1e-41 175.6 288 33.3
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 4.6e-35 153.7 91 75.8
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 1.8e-31 141.7 87 80.5
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.1e-31 141.0 129 55.0
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 4.3e-25 120.6 75 70.7
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.0e-22 111.7 80 65.0
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.4e-22 110.9 61 75.4
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 3.9e-18 97.4 86 55.8
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 3.3e-17 94.4 162 31.5
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 8.9e-15 86.3 113 45.1
HPP92_015861 Vanilla planifolia HOM05D006614 ORTHO05D008217 9.9e-06 56.2 30 83.3


User provided reference genes

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