Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0027009 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 2.8e-230 801.6 399 100.0
CSS0016229 Camellia sinensis var. sinensis HOM05D004963 ORTHO05D006638 1.5e-156 556.6 326 86.2
Rhsim10G0016800 Rhododendron simsii HOM05D004963 ORTHO05D006638 1.4e-93 347.4 371 52.8
vmacro05867 Vaccinium macrocarpon HOM05D004963 ORTHO05D006638 2.1e-92 343.6 371 52.0
Dinv35107 Davidia involucrata HOM05D004963 ORTHO05D006638 2.0e-87 327.0 374 50.5
TAR629G0020 Trochodendron aralioides HOM05D004963 ORTHO05D006638 5.6e-82 308.9 374 47.6
Cfa007367 Carpinus fangiana HOM05D004963 ORTHO05D006638 2.0e-79 300.4 377 46.4
Haze_14742 Corylus avellana HOM05D004963 ORTHO05D006638 9.3e-77 291.6 403 43.7
Rhsim10G0015700 Rhododendron simsii HOM05D004963 ORTHO05D006638 3.5e-76 289.7 371 46.4
GSVIVG01032403001 Vitis vinifera HOM05D004963 ORTHO05D006638 1.9e-74 283.9 410 41.5
Atru.chr6.2399 Acer truncatum HOM05D004963 ORTHO05D006638 5.3e-72 275.8 409 41.3
Thecc.04G017500 Theobroma cacao HOM05D004963 ORTHO05D006638 3.8e-70 269.6 374 41.7
Nn4g22627 Nelumbo nucifera HOM05D004963 ORTHO05D006638 1.4e-69 267.7 374 42.8
Lju41A42T102 Lonicera japonica HOM05D004963 ORTHO05D006638 2.4e-69 266.9 407 42.8
Nitab4.5_0001040g0180 Nicotiana tabacum HOM05D004963 ORTHO05D006638 3.2e-69 266.5 374 42.0
Prupe.3G292000 Prunus persica HOM05D004963 ORTHO05D006638 9.3e-69 265.0 374 41.4
Solyc02g070810.4 Solanum lycopersicum HOM05D004963 ORTHO05D006638 9.3e-69 265.0 374 41.7
Sopen02g019920 Solanum pennellii HOM05D004963 ORTHO05D006638 1.2e-68 264.6 374 41.7
PGSC0003DMG400008314 Solanum tuberosum HOM05D004963 ORTHO05D006638 2.1e-68 263.8 374 41.4
Nitab4.5_0001655g0190 Nicotiana tabacum HOM05D004963 ORTHO05D006638 7.9e-68 261.9 374 42.0
Sc03g0007420 Simmondsia chinensis HOM05D004963 ORTHO05D006638 7.9e-68 261.9 373 41.6
Duzib147G0997 Durio zibethinus HOM05D004963 ORTHO05D006638 3.9e-67 259.6 374 40.4
CAN.G257.2 Capsicum annuum HOM05D004963 ORTHO05D006638 1.9e-66 257.3 374 40.9
CiPaw.03G043900 Carya illinoinensis HOM05D004963 ORTHO05D006638 1.9e-66 257.3 374 42.5
MD17G1026700 Malus domestica HOM05D004963 ORTHO05D006638 1.9e-66 257.3 374 40.9
TWI56G0249 Tripterygium wilfordii HOM05D004963 ORTHO05D006638 1.3e-65 254.6 374 41.4
Peaxi162Scf00796g00213 Petunia axillaris HOM05D004963 ORTHO05D006638 1.6e-65 254.2 379 40.4
Gohir.D09G029000 Gossypium hirsutum HOM05D004963 ORTHO05D006638 3.7e-65 253.1 374 40.1
CANSAT64G0570 Cannabis sativa HOM05D004963 ORTHO05D006638 6.2e-65 252.3 375 40.8
Cc07_g01650 Coffea canephora HOM05D004963 ORTHO05D006638 8.1e-65 251.9 372 40.6
COL.COLO4_29124 Corchorus olitorius HOM05D004963 ORTHO05D006638 8.1e-65 251.9 371 39.1
Manes.17G112100 Manihot esculenta HOM05D004963 ORTHO05D006638 2.4e-64 250.4 398 40.5
Gohir.A09G029300 Gossypium hirsutum HOM05D004963 ORTHO05D006638 1.5e-63 247.7 374 39.3
Lj2g0007459 Lotus japonicus HOM05D004963 ORTHO05D006638 2.6e-63 246.9 374 40.6
DCAR_001439 Daucus carota HOM05D004963 ORTHO05D006638 1.3e-62 244.6 358 42.7
Potri.001G345100 Populus trichocarpa HOM05D004963 ORTHO05D006638 1.7e-62 244.2 398 37.9
Sabra16G0224100 Salix brachista HOM05D004963 ORTHO05D006638 1.7e-62 244.2 383 38.9
arahy.Tifrunner.gnm1.ann1.8578L4 Arachis hypogaea HOM05D004963 ORTHO05D006638 4.9e-62 242.7 374 39.8
Eucgr.J02245 Eucalyptus grandis HOM05D004963 ORTHO05D006638 4.9e-62 242.7 373 38.9
FvH4_6g51430 Fragaria vesca HOM05D004963 ORTHO05D006638 8.4e-62 241.9 373 39.4
PGR083G0595 Punica granatum HOM05D004963 ORTHO05D006638 8.4e-62 241.9 409 37.9
AUR62028465 Chenopodium quinoa HOM05D004963 ORTHO05D006638 1.4e-61 241.1 371 40.2
Glyma.05G003500 Glycine max HOM05D004963 ORTHO05D006638 3.2e-61 240.0 374 39.6
RcHm_v2.0_Chr2g0173101 Rosa chinensis HOM05D004963 ORTHO05D006638 7.1e-61 238.8 375 38.9
Phvul.004G006800 Phaseolus vulgaris HOM05D004963 ORTHO05D006638 9.3e-61 238.4 374 40.1
MSTRG.3144 Avicennia marina HOM05D004963 ORTHO05D006638 2.1e-60 237.3 371 40.2
AUR62043498 Chenopodium quinoa HOM05D004963 ORTHO05D006638 2.7e-60 236.9 374 39.6
Oeu046826.1 Olea europaea HOM05D004963 ORTHO05D006638 1.8e-59 234.2 330 42.7
Ca_04160_v3 Cicer arietinum L. HOM05D004963 ORTHO05D006638 2.3e-59 233.8 374 38.8
Psat1g054400 Pisum sativum HOM05D004963 ORTHO05D006638 3.9e-59 233.0 374 39.0
TPR.G33247 Trifolium pratense HOM05D004963 ORTHO05D006638 6.7e-59 232.3 374 37.7
Aqoxy5G03770 Aquilegia oxysepala HOM05D004963 ORTHO05D006638 4.3e-58 229.6 373 38.3
Medtr6g004840 Medicago truncatula HOM05D004963 ORTHO05D006638 1.6e-57 227.6 374 39.0
Ah.03g137060 Amaranthus hybridus HOM05D004963 ORTHO05D006638 6.3e-57 225.7 373 37.0
Sed0022939 Sechium edule HOM05D004963 ORTHO05D006638 6.3e-57 225.7 379 37.2
Lalb_Chr06g0175731 Lupinus albus HOM05D004963 ORTHO05D006638 1.4e-56 224.6 374 38.8
MELO3C026582.2 Cucumis melo HOM05D004963 ORTHO05D006638 4.1e-56 223.0 379 36.9
SalBow1G1005 Salvia bowleyana HOM05D004963 ORTHO05D006638 5.3e-56 222.6 370 38.4
CsaV3_3G042810 Cucumis sativus L. HOM05D004963 ORTHO05D006638 1.5e-55 221.1 379 37.5
ATR0824G203 Amborella trichopoda HOM05D004963 ORTHO05D006638 2.9e-54 216.9 375 36.5
VMungo0464G1605 Vigna mungo HOM05D004963 ORTHO05D006638 3.2e-53 213.4 353 39.4
EL10Ac6g14083 Beta vulgaris HOM05D004963 ORTHO05D006638 3.5e-52 209.9 363 36.6
PSO063G6295 Papaver somniferum HOM05D004963 ORTHO05D006638 2.3e-51 207.2 372 35.5
PSO067G0032 Papaver somniferum HOM05D004963 ORTHO05D006638 2.3e-51 207.2 372 35.2
Migut.H00075 Erythranthe guttata HOM05D004963 ORTHO05D006638 3.0e-51 206.8 330 37.9
AL7G49340 Arabidopsis lyrata HOM05D004963 ORTHO05D006638 1.6e-49 201.1 334 39.5
Aa31LG9G1130 Aethionema arabicum HOM05D004963 ORTHO05D006638 6.3e-49 199.1 335 38.5
AT5G40480 Arabidopsis thaliana HOM05D004963 ORTHO05D006638 6.3e-49 199.1 334 39.2
CARHR261510 Cardamine hirsuta HOM05D004963 ORTHO05D006638 1.1e-48 198.4 334 38.3
unitig_748.g6983 Utricularia gibba HOM05D004963 ORTHO05D006638 1.4e-48 198.0 362 34.8
Carub.0007s3510 Capsella rubella HOM05D004963 ORTHO05D006638 5.3e-48 196.1 335 37.9
ClCG10G013870 Citrullus lanatus HOM05D004963 ORTHO05D006638 9.0e-48 195.3 326 38.7
SGA_v2.0_scaffold18G08276 Striga asiatica HOM05D004963 ORTHO05D006638 9.0e-48 195.3 329 36.2
A07p20280 Brassica napus HOM05D004963 ORTHO05D006638 1.5e-47 194.5 336 37.8
BraA07t29729Z Brassica rapa HOM05D004963 ORTHO05D006638 1.5e-47 194.5 336 37.8
Cpa.g.sc108.69 Carica papaya HOM05D004963 ORTHO05D006638 1.5e-47 194.5 296 39.2
C06p19070 Brassica napus HOM05D004963 ORTHO05D006638 5.9e-47 192.6 335 37.3
BolC6t37108H Brassica oleracea HOM05D004963 ORTHO05D006638 5.9e-47 192.6 335 37.3
Sp7g01430 Schrenkiella parvula HOM05D004963 ORTHO05D006638 5.9e-47 192.6 335 36.7
BcaC08g44458 Brassica carinata HOM05D004963 ORTHO05D006638 2.2e-46 190.7 335 37.0
Thhalv10027618m.g Eutrema salsugineum HOM05D004963 ORTHO05D006638 3.8e-46 189.9 334 37.7
THA.LOC104805370 Tarenaya hassleriana HOM05D004963 ORTHO05D006638 8.5e-46 188.7 332 37.3
BcaB02g07947 Brassica carinata HOM05D004963 ORTHO05D006638 1.4e-45 188.0 335 37.0
Zm00001eb096130 Zea mays HOM05D004963 ORTHO05D006638 6.9e-40 169.1 330 33.3
CDE07G2050 Ceratophyllum demersum HOM05D004963 ORTHO05D006638 1.3e-38 164.9 351 32.2
Ciclev10018026m.g Citrus clementina HOM05D004963 ORTHO05D006638 1.7e-38 164.5 150 56.7
HPP92_013426 Vanilla planifolia HOM05D004963 ORTHO05D006638 1.0e-30 138.7 295 31.9
Ciclev10014326m.g Citrus clementina HOM05D004963 ORTHO05D006638 4.0e-27 126.7 153 45.1
Migut.J01521 Erythranthe guttata HOM05D004963 ORTHO05D006638 3.8e-22 110.2 132 42.4
FAN14G4225 Fragaria x ananassa HOM05D004963 ORTHO05D006638 1.2e-20 105.1 119 47.1
Mapoly0043s0050 Marchantia polymorpha HOM05D004963 ORTHO05D006638 3.6e-20 103.6 335 25.7
SMO145G0002 Selaginella moellendorffii HOM05D004963 ORTHO05D006638 1.1e-16 92.0 324 24.4
Actinidia36871 Actinidia chinensis HOM05D004963 ORTHO05D006638 3.5e-15 87.0 91 49.5
Pp3c27_1470 Physcomitrium patens HOM05D004963 ORTHO05D006638 3.8e-14 83.6 327 24.2
CBR_g4853 Chara braunii HOM05D004963 ORTHO05D006638 1.2e-12 78.6 177 28.2
CSS0035916 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000001 1.4e-11 75.1 49 79.6
CSS0005233 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D033894 5.2e-11 73.2 49 77.6
CSS0009597 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.2e-11 73.2 49 77.6
CSS0042384 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 5.2e-11 73.2 49 75.5
CSS0041102 Camellia sinensis var. sinensis HOM05D000499 ORTHO05D007471 1.2e-10 72.0 49 75.5
CSS0014826 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 1.5e-10 71.6 49 75.5
Actinidia27518 Actinidia chinensis HOM05D001993 ORTHO05D030912 3.7e-09 67.0 46 73.9
CSS0015424 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000105 6.3e-09 66.2 49 69.4
CSS0024898 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D000001 1.1e-08 65.5 49 69.4
CSS0048629 Camellia sinensis var. sinensis HOM05D000185 ORTHO05D006268 3.1e-08 63.9 49 69.4


User provided reference genes

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