Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.7e-128 462.6 227 100.0
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 9.9e-108 393.7 229 84.3
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 1.7e-107 392.9 228 84.2
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 1.3e-99 366.7 227 78.4
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 8.4e-99 364.0 226 79.6
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.9e-96 355.1 226 77.4
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 9.6e-95 350.5 226 74.8
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 2.1e-94 349.4 211 77.7
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 2.8e-94 349.0 225 76.0
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 3.1e-93 345.5 228 74.6
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 1.5e-92 343.2 212 75.5
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 3.4e-92 342.0 211 75.4
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 7.6e-92 340.9 211 76.3
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 1.7e-91 339.7 228 69.7
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 8.4e-91 337.4 226 69.0
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 8.4e-91 337.4 230 67.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 3.2e-90 335.5 211 73.5
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 4.2e-90 335.1 225 71.1
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 9.3e-90 334.0 217 73.3
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 9.3e-90 334.0 210 71.4
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 1.2e-89 333.6 204 73.5
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 2.1e-89 332.8 223 68.6
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.7e-89 332.4 226 69.0
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 3.5e-89 332.0 226 68.6
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.5e-89 332.0 225 71.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 3.5e-89 332.0 225 71.1
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 4.6e-89 331.6 204 73.0
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 1.0e-88 330.5 223 68.2
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 2.3e-88 329.3 228 70.2
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 3.0e-88 328.9 228 70.6
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 5.1e-88 328.2 216 70.8
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 8.7e-88 327.4 228 70.2
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.5e-87 325.9 206 71.8
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.5e-87 325.9 230 68.7
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 2.5e-87 325.9 206 72.8
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 5.6e-87 324.7 234 67.1
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 5.6e-87 324.7 229 67.2
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 5.6e-87 324.7 216 70.4
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 7.3e-87 324.3 214 71.5
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 9.6e-87 323.9 230 69.1
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.3e-86 323.6 229 67.2
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 1.6e-86 323.2 206 72.3
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 2.8e-86 322.4 207 74.4
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 3.6e-86 322.0 215 70.7
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 6.2e-86 321.2 229 67.2
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 8.1e-86 320.9 220 68.2
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 1.1e-85 320.5 227 67.8
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-85 320.1 217 70.0
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-85 320.1 217 70.0
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 3.1e-85 318.9 206 71.8
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 1.2e-84 317.0 211 69.2
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 3.4e-84 315.5 207 69.6
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 4.5e-84 315.1 208 69.2
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 7.6e-84 314.3 228 66.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 9.9e-84 313.9 209 70.3
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 1.3e-83 313.5 217 67.7
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 2.9e-83 312.4 215 67.9
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 6.4e-83 311.2 216 67.1
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 1.1e-82 310.5 211 66.8
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 1.1e-82 310.5 204 72.1
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 1.1e-82 310.5 207 68.6
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 1.4e-82 310.1 214 70.1
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 1.9e-82 309.7 228 66.2
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 2.7e-81 305.8 207 68.6
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 6.0e-81 304.7 208 65.4
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 6.0e-81 304.7 217 67.3
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 1.0e-80 303.9 217 67.3
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 3.0e-80 302.4 217 65.4
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 1.5e-79 300.1 222 64.0
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 1.5e-79 300.1 222 64.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 2.5e-79 299.3 213 69.0
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 7.4e-79 297.7 216 64.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 2.1e-78 296.2 213 63.4
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 3.7e-78 295.4 185 71.9
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.4e-77 293.5 207 67.1
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.8e-77 293.1 228 61.0
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 4.0e-77 292.0 187 79.7
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 1.5e-76 290.0 206 67.0
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 2.9e-75 285.8 226 61.9
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 6.5e-75 284.6 195 66.2
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 8.4e-75 284.3 196 69.4
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 1.4e-74 283.5 227 63.9
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 8.7e-72 274.2 197 67.0
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.6e-70 270.0 247 57.9
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 2.8e-70 269.2 211 64.0
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 4.8e-70 268.5 162 74.7
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 4.5e-68 261.9 175 70.9
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 1.7e-67 260.0 209 61.2
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 1.9e-66 256.5 217 59.0
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 1.2e-65 253.8 195 62.6
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 2.2e-62 243.0 176 64.8
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 2.2e-62 243.0 164 70.1
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 4.5e-60 235.3 232 54.7
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 5.9e-60 235.0 209 54.5
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 3.8e-59 232.3 174 61.5
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 8.5e-59 231.1 201 55.7
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 4.1e-53 212.2 130 79.2
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 2.9e-51 206.1 208 50.5
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 6.3e-46 188.3 108 82.4
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 1.4e-45 187.2 190 49.5
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 2.2e-43 179.9 200 46.0
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.5e-42 175.3 212 43.4
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 3.7e-38 162.5 81 98.8
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.7e-33 146.4 161 50.3
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 3.2e-26 122.9 81 64.2
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 9.4e-26 121.3 98 59.2
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 1.8e-21 107.1 97 49.5
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 4.7e-17 92.4 87 50.6
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 9.5e-10 68.2 92 39.1
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.8e-09 66.6 59 55.9


User provided reference genes

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