Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026928 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 1.6e-131 472.6 219 100.0
Rhsim12G0168500 Rhododendron simsii HOM05D000434 ORTHO05D005992 2.2e-112 409.1 219 84.5
CSS0032276 Camellia sinensis var. sinensis HOM05D000434 ORTHO05D005992 2.3e-109 399.1 217 82.5
Duzib068G0672 Durio zibethinus HOM05D000434 ORTHO05D005992 2.3e-109 399.1 220 80.9
Cfa019231 Carpinus fangiana HOM05D000434 ORTHO05D005992 8.6e-109 397.1 216 81.0
DCAR_007452 Daucus carota HOM05D000434 ORTHO05D007220 1.1e-108 396.7 219 81.7
Haze_07598 Corylus avellana HOM05D000434 ORTHO05D005992 1.5e-108 396.4 218 79.8
ECA232G2851 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.5e-108 396.4 216 82.4
Ciclev10021198m.g Citrus clementina HOM05D000434 ORTHO05D005992 7.3e-108 394.0 219 80.8
Lj5P131T21 Lonicera japonica HOM05D000434 ORTHO05D005992 1.2e-107 393.3 216 80.1
CANSAT80G1313 Cannabis sativa HOM05D000434 ORTHO05D005992 1.6e-107 392.9 219 78.5
GSVIVG01007623001 Vitis vinifera HOM05D000434 ORTHO05D005992 2.8e-107 392.1 219 80.4
CiPaw.12G032200 Carya illinoinensis HOM05D000434 ORTHO05D005992 3.6e-107 391.7 218 78.4
Cc04_g11350 Coffea canephora HOM05D000434 ORTHO05D005992 3.6e-107 391.7 216 80.6
COL.COLO4_21936 Corchorus olitorius HOM05D000434 ORTHO05D005992 1.1e-106 390.2 216 78.7
Prupe.5G164400 Prunus persica HOM05D000434 ORTHO05D005992 1.1e-106 390.2 218 78.0
TAR622G0355 Trochodendron aralioides HOM05D000434 ORTHO05D005992 1.4e-106 389.8 216 81.5
TWI39G0022 Tripterygium wilfordii HOM05D000434 ORTHO05D005992 6.8e-106 387.5 217 78.8
MD14G1170200 Malus domestica HOM05D000434 ORTHO05D005992 1.2e-105 386.7 218 77.1
Peaxi162Scf00089g01220 Petunia axillaris HOM05D000434 ORTHO05D005992 4.4e-105 384.8 215 79.1
CAN.G126.46 Capsicum annuum HOM05D000434 ORTHO05D005992 7.5e-105 384.0 216 77.3
FvH4_5g06420 Fragaria vesca HOM05D000434 ORTHO05D005992 1.7e-104 382.9 218 78.0
FAN18G2656 Fragaria x ananassa HOM05D000434 ORTHO05D005992 1.7e-104 382.9 218 78.0
FAN08G0399 Fragaria x ananassa HOM05D000434 ORTHO05D005992 2.2e-104 382.5 218 77.5
Nitab4.5_0008037g0030 Nicotiana tabacum HOM05D000434 ORTHO05D005992 2.2e-104 382.5 216 78.2
PGR083G1106 Punica granatum HOM05D000434 ORTHO05D005992 2.9e-104 382.1 218 76.6
Thecc.03G116300 Theobroma cacao HOM05D000434 ORTHO05D005992 3.7e-104 381.7 221 77.4
Lj4g0020673 Lotus japonicus HOM05D000434 ORTHO05D005992 6.4e-104 380.9 218 76.6
QL10p006660 Quercus lobata HOM05D000434 ORTHO05D005992 8.3e-104 380.6 216 77.3
CANSAT80G2029 Cannabis sativa HOM05D000434 ORTHO05D005992 1.4e-103 379.8 219 75.8
PGSC0003DMG400018193 Solanum tuberosum HOM05D000434 ORTHO05D005992 1.9e-103 379.4 216 76.9
COL.COLO4_20637 Corchorus olitorius HOM05D000434 ORTHO05D005992 3.2e-103 378.6 218 76.6
Glyma.06G176400 Glycine max HOM05D000434 ORTHO05D005992 3.2e-103 378.6 218 76.6
FAN04G1602 Fragaria x ananassa HOM05D000434 ORTHO05D005992 4.1e-103 378.3 218 77.1
Glyma.05G042300 Glycine max HOM05D000434 ORTHO05D005992 4.1e-103 378.3 218 75.2
Nitab4.5_0002522g0080 Nicotiana tabacum HOM05D000434 ORTHO05D005992 4.1e-103 378.3 216 77.3
HanXRQChr09g0272611 Helianthus annuus HOM05D000434 ORTHO05D005992 5.4e-103 377.9 216 78.7
Gohir.A03G074900 Gossypium hirsutum HOM05D000434 ORTHO05D005992 7.1e-103 377.5 219 76.3
Nn4g22577 Nelumbo nucifera HOM05D000434 ORTHO05D005992 7.1e-103 377.5 217 76.5
Cpa.g.sc968.1 Carica papaya HOM05D000434 ORTHO05D005992 9.2e-103 377.1 217 75.1
Glyma.06G176500 Glycine max HOM05D000434 ORTHO05D005992 9.2e-103 377.1 218 76.6
Phvul.009G172800 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 9.2e-103 377.1 218 75.2
Solyc03g112080.1 Solanum lycopersicum HOM05D000434 ORTHO05D005992 9.2e-103 377.1 216 76.9
Sopen03g031180 Solanum pennellii HOM05D000434 ORTHO05D005992 9.2e-103 377.1 216 76.9
Glyma.17G125000 Glycine max HOM05D000434 ORTHO05D005992 1.2e-102 376.7 218 75.2
Manes.06G111500 Manihot esculenta HOM05D000434 ORTHO05D005992 1.2e-102 376.7 219 76.3
RcHm_v2.0_Chr7g0192361 Rosa chinensis HOM05D000434 ORTHO05D005992 1.6e-102 376.3 216 77.8
Phvul.009G172900 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.1e-102 375.9 218 74.8
PSO754G0021 Papaver somniferum HOM05D000434 ORTHO05D005992 2.7e-102 375.6 216 75.0
Lsat_1_v5_gn_4_79260 Lactuca sativa HOM05D000434 ORTHO05D005992 3.5e-102 375.2 216 76.4
Oeu036498.1 Olea europaea HOM05D000434 ORTHO05D005992 3.5e-102 375.2 217 76.0
Lalb_Chr08g0236831 Lupinus albus HOM05D000434 ORTHO05D005992 7.8e-102 374.0 218 75.2
MSTRG.4348 Avicennia marina HOM05D000434 ORTHO05D005992 2.3e-101 372.5 217 74.7
LjContig00127g0004723 Lotus japonicus HOM05D000434 ORTHO05D005992 3.9e-101 371.7 219 74.9
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 6.6e-101 370.9 219 74.4
Nitab4.5_0001243g0040 Nicotiana tabacum HOM05D000434 ORTHO05D005992 8.6e-101 370.5 216 75.9
Potri.012G089400 Populus trichocarpa HOM05D000434 ORTHO05D005992 8.6e-101 370.5 219 74.9
VMungo1309G2156 Vigna mungo HOM05D000434 ORTHO05D005992 8.6e-101 370.5 219 75.3
Lalb_Chr07g0183021 Lupinus albus HOM05D000434 ORTHO05D005992 1.1e-100 370.2 218 72.5
Atru.chr9.2595 Acer truncatum HOM05D000434 ORTHO05D005992 1.9e-100 369.4 205 80.0
Ca_19422_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 2.5e-100 369.0 218 73.4
Eucgr.B00212 Eucalyptus grandis HOM05D000434 ORTHO05D005992 3.3e-100 368.6 216 75.5
Psat4g061720 Pisum sativum HOM05D000434 ORTHO05D005992 3.3e-100 368.6 216 73.6
Lalb_Chr13g0297571 Lupinus albus HOM05D000434 ORTHO05D005992 4.3e-100 368.2 218 72.5
VMungo1309G2109 Vigna mungo HOM05D000434 ORTHO05D005992 5.6e-100 367.9 218 73.4
Aqoxy5G03716 Aquilegia oxysepala HOM05D000434 ORTHO05D005992 7.3e-100 367.5 216 75.0
EL10Ac7g17989 Beta vulgaris HOM05D000434 ORTHO05D005992 7.3e-100 367.5 216 75.0
SalBow5G1452 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.5e-100 367.1 216 75.5
SalBow5G4047 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.5e-100 367.1 216 75.5
SalBow5G5274 Salvia bowleyana HOM05D000434 ORTHO05D005992 9.5e-100 367.1 216 75.5
Sabra12G0064400 Salix brachista HOM05D000434 ORTHO05D005992 2.1e-99 365.9 216 74.1
Medtr3g076590 Medicago truncatula HOM05D000434 ORTHO05D005992 2.8e-99 365.5 216 75.9
Phvul.009G172700 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 3.6e-99 365.2 218 73.4
VMungo1215G0774 Vigna mungo HOM05D000434 ORTHO05D005992 3.6e-99 365.2 216 73.1
TPR.G37491 Trifolium pratense HOM05D000434 ORTHO05D007220 4.7e-99 364.8 216 70.8
MBI06_g22722_MAGBIO Magnolia biondii HOM05D000434 ORTHO05D005992 1.4e-98 363.2 217 73.3
Phvul.003G206000 Phaseolus vulgaris HOM05D000434 ORTHO05D005992 2.3e-98 362.5 209 76.1
Sc04g0001380 Simmondsia chinensis HOM05D000434 ORTHO05D005992 2.3e-98 362.5 216 75.0
Medtr4g104690 Medicago truncatula HOM05D000434 ORTHO05D005992 5.2e-98 361.3 216 71.8
Nitab4.5_0000025g0390 Nicotiana tabacum HOM05D000434 ORTHO05D005992 6.8e-98 360.9 216 72.7
VMungo1309G2813 Vigna mungo HOM05D000434 ORTHO05D005992 8.9e-98 360.5 218 72.5
Ca_16123_v3 Cicer arietinum L. HOM05D000434 ORTHO05D005992 1.5e-97 359.8 217 72.8
Peaxi162Scf00801g00033 Petunia axillaris HOM05D000434 ORTHO05D005992 1.5e-97 359.8 216 73.6
ATR0122G026 Amborella trichopoda HOM05D000434 ORTHO05D005992 3.4e-97 358.6 216 71.8
AUR62001199 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.4e-97 358.6 216 71.8
AUR62022129 Chenopodium quinoa HOM05D000434 ORTHO05D005992 3.4e-97 358.6 216 71.3
CsaV3_1G008920 Cucumis sativus L. HOM05D000434 ORTHO05D005992 4.4e-97 358.2 217 71.9
Psat5g116720 Pisum sativum HOM05D000434 ORTHO05D005992 5.8e-97 357.8 218 74.3
ClCG03G003070 Citrullus lanatus HOM05D000434 ORTHO05D005992 7.6e-97 357.5 217 71.9
MELO3C002306.2 Cucumis melo HOM05D000434 ORTHO05D005992 7.6e-97 357.5 217 71.9
arahy.Tifrunner.gnm1.ann1.D0ANT3 Arachis hypogaea HOM05D000434 ORTHO05D005992 1.3e-96 356.7 217 71.9
HanXRQChr05g0154811 Helianthus annuus HOM05D000434 ORTHO05D005992 1.3e-96 356.7 215 74.4
arahy.Tifrunner.gnm1.ann1.Z1M7DP Arachis hypogaea HOM05D000434 ORTHO05D005992 1.7e-96 356.3 217 71.9
Gohir.A12G185500 Gossypium hirsutum HOM05D000434 ORTHO05D005992 1.7e-96 356.3 219 71.7
TPR.G35602 Trifolium pratense HOM05D000434 ORTHO05D005992 1.7e-96 356.3 216 73.6
Oeu044591.1 Olea europaea HOM05D000434 ORTHO05D005992 2.9e-96 355.5 216 72.7
THA.LOC104824991 Tarenaya hassleriana HOM05D000434 ORTHO05D005992 2.9e-96 355.5 213 72.3
Migut.O00171 Erythranthe guttata HOM05D000434 ORTHO05D005992 4.9e-96 354.8 216 72.2
Migut.D02023 Erythranthe guttata HOM05D000434 ORTHO05D005992 6.4e-96 354.4 216 74.1
Gorai.008G202000 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.1e-95 353.6 219 71.2
SGA_v2.0_scaffold90G27827 Striga asiatica HOM05D000434 ORTHO05D005992 1.1e-95 353.6 216 70.8
Sed0014341 Sechium edule HOM05D000434 ORTHO05D005992 1.9e-95 352.8 217 71.9
Thhalv10025788m.g Eutrema salsugineum HOM05D000434 ORTHO05D005992 3.2e-95 352.1 213 71.8
SGA_v2.0_scaffold114G31805 Striga asiatica HOM05D000434 ORTHO05D005992 2.7e-94 349.0 219 69.9
CDE09G0062 Ceratophyllum demersum HOM05D000434 ORTHO05D005992 6.0e-94 347.8 217 69.6
Ah.08g218690 Amaranthus hybridus HOM05D000434 ORTHO05D007220 1.7e-93 346.3 216 69.9
Sp7g22710 Schrenkiella parvula HOM05D000434 ORTHO05D005992 5.1e-93 344.7 213 70.4
SEGI_02641 Sequoiadendron giganteum HOM05D000434 ORTHO05D005992 8.6e-93 344.0 217 68.2
Aa31LG7G11150 Aethionema arabicum HOM05D000434 ORTHO05D005992 1.1e-92 343.6 213 70.9
AT4G24730 Arabidopsis thaliana HOM05D000434 ORTHO05D005992 4.3e-92 341.7 213 69.0
AL7G28460 Arabidopsis lyrata HOM05D000434 ORTHO05D005992 5.6e-92 341.3 213 70.0
CARHR232100 Cardamine hirsuta HOM05D000434 ORTHO05D005992 9.6e-92 340.5 213 69.5
Aa31LG7G11140 Aethionema arabicum HOM05D000434 ORTHO05D005992 4.7e-91 338.2 213 67.6
SalBow5G0725 Salvia bowleyana HOM05D000434 ORTHO05D005992 4.7e-91 338.2 216 70.4
Os07g0688000 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 6.2e-91 337.8 219 66.7
A01p16060 Brassica napus HOM05D000434 ORTHO05D005992 8.1e-91 337.4 215 69.3
BraA01t01541Z Brassica rapa HOM05D000434 ORTHO05D001445 1.1e-90 337.0 215 69.3
Carub.0007s1633 Capsella rubella HOM05D000434 ORTHO05D005992 1.1e-90 337.0 213 68.5
C01p20050 Brassica napus HOM05D000434 ORTHO05D001445 1.8e-90 336.3 215 69.3
Gohir.D12G188284 Gossypium hirsutum HOM05D000434 ORTHO05D005992 3.1e-90 335.5 207 71.5
BolC1t01932H Brassica oleracea HOM05D000434 ORTHO05D001445 1.5e-89 333.2 215 69.3
Gorai.003G107100 Gossypium raimondii HOM05D000434 ORTHO05D005992 1.7e-88 329.7 186 79.6
HPP92_004599 Vanilla planifolia HOM05D000434 ORTHO05D005992 4.9e-88 328.2 219 65.3
Gohir.D03G101700 Gossypium hirsutum HOM05D000434 ORTHO05D005992 2.4e-87 325.9 186 78.5
Zm00001eb306980 Zea mays HOM05D000434 ORTHO05D005992 3.2e-87 325.5 216 64.4
Pp3c23_9280 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.7e-85 319.7 216 62.5
Migut.L00359 Erythranthe guttata HOM05D000434 ORTHO05D005992 8.7e-85 317.4 192 73.4
HanXRQChr02g0032551 Helianthus annuus HOM05D000434 ORTHO05D005992 1.4e-82 310.1 215 66.0
unitig_22.g6297 Utricularia gibba HOM05D000434 ORTHO05D005992 2.0e-81 306.2 187 71.1
AUR62028295 Chenopodium quinoa HOM05D000434 ORTHO05D005992 2.6e-81 305.8 207 65.2
Migut.L00543 Erythranthe guttata HOM05D000434 ORTHO05D005992 5.8e-81 304.7 207 69.6
BcaC09g50836 Brassica carinata HOM05D000434 ORTHO05D001445 9.9e-81 303.9 215 64.2
Os08g0557200 Oryza sativa ssp. japonica HOM05D000434 ORTHO05D005992 1.9e-79 299.7 214 61.2
Pp3c15_10910 Physcomitrium patens HOM05D000434 ORTHO05D005992 1.9e-79 299.7 216 59.7
Zm00001eb176220 Zea mays HOM05D000434 ORTHO05D005992 6.0e-78 294.7 220 59.1
CBR_g48132 Chara braunii HOM05D000434 ORTHO05D005992 2.1e-75 286.2 218 56.9
Sed0024178 Sechium edule HOM05D000434 ORTHO05D005992 9.0e-74 280.8 216 58.3
Mapoly0153s0032 Marchantia polymorpha HOM05D000434 ORTHO05D005992 7.1e-71 271.2 217 55.3
SalBow5G4235 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.9e-70 267.7 170 69.4
ECA233G1405 Erigeron canadensis HOM05D000434 ORTHO05D005992 1.6e-67 260.0 146 78.1
Gohir.D12G188312 Gossypium hirsutum HOM05D000434 ORTHO05D005992 6.9e-66 254.6 219 57.5
Gorai.008G202100 Gossypium raimondii HOM05D000434 ORTHO05D005992 6.9e-66 254.6 219 57.5
SHI03475 Sapria himalayana HOM05D000434 ORTHO05D005992 1.1e-60 237.3 218 52.3
SMO361G0760 Selaginella moellendorffii HOM05D000434 ORTHO05D005992 6.9e-58 228.0 217 48.8
HPP92_020252 Vanilla planifolia HOM05D000434 ORTHO05D005992 1.6e-51 206.8 128 66.4
SalBow5G1355 Salvia bowleyana HOM05D000434 ORTHO05D005992 7.2e-47 191.4 216 49.5
HanXRQChr09g0263851 Helianthus annuus HOM05D000434 ORTHO05D005992 7.5e-28 128.3 79 72.2
MCO10G403 Micromonas commoda HOM05D000434 ORTHO05D005992 4.8e-27 125.6 224 34.4
Mapoly0043s0121 Marchantia polymorpha HOM05D000434 ORTHO05D005992 9.1e-26 121.3 214 32.2
MCO14G418 Micromonas commoda HOM05D000434 ORTHO05D005992 1.3e-16 90.9 224 28.1
AagrBONN_evm.TU.Sc2ySwM_368.1237 Anthoceros agrestis HOM05D000434 ORTHO05D005992 4.7e-14 82.4 144 34.0
Oeu057324.1 Olea europaea HOM05D000434 ORTHO05D005992 1.8e-13 80.5 74 55.4
Potri.015G085232 Populus trichocarpa HOM05D000434 ORTHO05D005992 4.1e-10 69.3 32 90.6


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