Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.9e-233 810.4 397 100.0
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 7.2e-231 803.5 397 99.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 3.9e-160 568.5 397 71.3
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.1e-157 560.5 415 68.2
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.7e-155 553.1 407 67.8
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 8.4e-155 550.8 401 70.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.1e-154 550.4 401 68.3
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.2e-154 548.5 389 69.2
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 5.5e-154 548.1 407 67.8
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.6e-153 546.6 388 69.1
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.3e-151 538.5 387 68.5
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 5.7e-151 538.1 398 66.6
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 1.3e-150 537.0 398 66.3
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 2.8e-150 535.8 399 68.7
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 1.4e-149 533.5 398 67.1
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.5e-148 530.0 406 66.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 2.9e-147 525.8 410 65.1
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.8e-147 525.4 405 64.9
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 6.5e-147 524.6 403 65.3
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.9e-146 523.1 406 65.3
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 2.5e-146 522.7 396 64.9
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 4.2e-146 521.9 393 65.9
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 4.6e-145 518.5 398 64.8
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.0e-144 517.3 400 64.0
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.8e-144 516.5 398 64.8
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.8e-144 516.5 387 65.6
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 2.3e-144 516.2 403 63.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 3.0e-144 515.8 384 66.7
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.1e-143 513.8 393 64.9
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.5e-143 512.7 387 64.9
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 4.3e-143 511.9 400 64.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 5.3e-141 505.0 402 63.2
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 6.9e-141 504.6 398 63.1
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 7.7e-140 501.1 430 61.4
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.0e-139 500.7 399 62.9
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.3e-139 500.4 405 63.2
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.2e-139 499.6 392 64.8
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.2e-137 493.8 403 61.5
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.6e-137 493.4 402 62.7
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.6e-137 493.4 404 62.4
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.6e-137 493.4 399 63.4
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 2.7e-137 492.7 399 63.2
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.0e-136 490.7 416 62.3
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.8e-136 490.0 402 62.4
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.8e-136 490.0 411 61.3
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 3.0e-136 489.2 376 63.0
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 5.1e-136 488.4 404 62.1
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 6.7e-136 488.0 403 64.0
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 2.6e-135 486.1 414 60.1
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 2.6e-135 486.1 399 63.4
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 4.4e-135 485.3 405 60.2
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 5.7e-135 485.0 424 59.2
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.2e-134 483.0 398 60.8
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 3.7e-134 482.3 403 63.0
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 3.7e-134 482.3 402 61.4
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 8.2e-134 481.1 405 60.5
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.1e-133 480.7 289 79.2
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.4e-133 479.6 401 61.8
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 5.3e-133 478.4 401 61.6
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.5e-132 476.9 379 63.3
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 1.3e-131 473.8 272 82.0
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.3e-131 473.8 402 60.0
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 3.8e-131 472.2 398 60.3
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 7.2e-130 468.0 399 61.2
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.6e-129 466.8 398 60.6
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 2.7e-129 466.1 402 58.5
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.4e-128 463.8 368 62.5
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 3.0e-128 462.6 398 58.3
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 8.8e-128 461.1 407 60.4
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.2e-126 456.4 398 59.0
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 3.7e-126 455.7 390 59.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 4.8e-126 455.3 397 58.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.4e-125 453.0 388 59.8
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 2.4e-125 453.0 390 59.7
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 4.5e-124 448.7 402 57.0
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.7e-123 446.8 399 59.9
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 8.5e-123 444.5 250 83.2
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 2.5e-122 443.0 395 58.7
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 8.0e-121 438.0 395 58.2
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 8.0e-121 438.0 395 58.2
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 8.0e-121 438.0 395 58.2
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 8.0e-121 438.0 386 58.3
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 4.0e-120 435.6 395 57.7
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.4e-119 432.2 325 64.3
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 7.5e-119 431.4 396 57.1
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 3.7e-118 429.1 376 60.9
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.6e-116 423.7 318 63.2
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 2.2e-115 419.9 403 55.1
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 9.4e-114 414.5 396 55.1
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 2.7e-113 412.9 245 77.1
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.7e-110 403.7 325 60.9
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 6.6e-107 391.7 394 54.8
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 6.6e-107 391.7 359 57.9
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 3.0e-104 382.9 401 51.1
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.6e-103 379.8 215 83.7
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 8.0e-97 358.2 399 52.4
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 6.8e-80 302.0 400 44.5
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 8.7e-67 258.5 148 78.4
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.4e-61 240.4 400 37.2
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 9.9e-55 218.4 373 35.1
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 4.3e-50 203.0 325 37.5
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 7.4e-50 202.2 119 73.9
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 9.6e-50 201.8 205 54.1
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.6e-47 193.7 270 40.0
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.6e-47 193.7 176 52.8
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 67.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 67.2
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 4.2e-37 159.8 199 48.2
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 7.9e-36 155.6 98 81.6
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.5e-31 141.4 157 47.8
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.7e-30 137.9 117 56.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.4e-24 117.5 297 30.0
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 4.1e-24 116.7 209 34.0
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.3e-09 68.6 94 47.9
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-09 68.6 90 50.0
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.7e-09 68.2 219 29.7


User provided reference genes

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