Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026903 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 4.9e-30 133.7 61 100.0
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 4.5e-15 84.0 59 69.5
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 5.9e-15 83.6 59 69.5
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 7.7e-15 83.2 59 67.8
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 6.5e-14 80.1 59 62.7
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 6.5e-14 80.1 59 62.7
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 8.5e-14 79.7 59 61.0
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 8.5e-14 79.7 59 62.7
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 8.5e-14 79.7 59 62.7
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 8.5e-14 79.7 59 62.7
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.1e-13 79.3 59 62.7
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 1.1e-13 79.3 59 62.7
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 1.4e-13 79.0 51 70.6
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.4e-13 79.0 59 61.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 1.4e-13 79.0 59 64.4
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.4e-13 79.0 59 62.7
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 2.5e-13 78.2 59 64.4
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 2.5e-13 78.2 57 63.2
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 3.2e-13 77.8 47 74.5
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 3.2e-13 77.8 59 62.7
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 3.2e-13 77.8 47 72.3
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.2e-13 77.4 59 62.7
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.2e-13 77.4 59 62.7
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 5.5e-13 77.0 59 64.4
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 5.5e-13 77.0 59 61.0
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 7.2e-13 76.6 59 64.4
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 7.2e-13 76.6 59 55.9
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 7.2e-13 76.6 59 64.4
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 7.2e-13 76.6 51 68.6
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 9.4e-13 76.3 59 61.0
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 9.4e-13 76.3 59 61.0
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 1.2e-12 75.9 59 61.0
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.2e-12 75.9 59 59.3
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 1.6e-12 75.5 59 61.0
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.6e-12 75.5 59 59.3
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.6e-12 75.5 59 61.0
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.6e-12 75.5 59 62.7
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 2.1e-12 75.1 59 61.0
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 2.1e-12 75.1 59 59.3
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 2.1e-12 75.1 57 59.6
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 2.1e-12 75.1 59 61.0
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 2.1e-12 75.1 59 61.0
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.7e-12 74.7 54 61.1
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 2.7e-12 74.7 54 61.1
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 2.7e-12 74.7 47 70.2
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 2.7e-12 74.7 59 62.7
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 3.6e-12 74.3 47 72.3
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 3.6e-12 74.3 59 61.0
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 4.6e-12 73.9 59 55.9
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 4.6e-12 73.9 59 61.0
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 4.6e-12 73.9 51 66.7
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 6.1e-12 73.6 59 62.7
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 6.1e-12 73.6 59 59.3
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 7.9e-12 73.2 59 57.6
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 7.9e-12 73.2 59 59.3
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 1.0e-11 72.8 59 59.3
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 1.0e-11 72.8 52 63.5
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 1.0e-11 72.8 59 57.6
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 1.0e-11 72.8 59 57.6
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.4e-11 72.4 52 61.5
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.4e-11 72.4 52 61.5
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.4e-11 72.4 51 64.7
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 1.8e-11 72.0 52 61.5
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.8e-11 72.0 56 55.4
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 1.8e-11 72.0 50 66.0
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 1.8e-11 72.0 50 70.0
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.8e-11 72.0 50 70.0
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 1.8e-11 72.0 59 59.3
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.8e-11 72.0 59 54.2
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 1.8e-11 72.0 52 63.5
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 2.3e-11 71.6 52 61.5
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 2.3e-11 71.6 52 61.5
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 2.3e-11 71.6 52 61.5
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 2.3e-11 71.6 52 61.5
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 2.3e-11 71.6 59 54.2
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 2.3e-11 71.6 52 61.5
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.3e-11 71.6 57 59.6
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.0e-11 71.2 59 55.9
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 3.0e-11 71.2 59 55.9
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 3.0e-11 71.2 59 55.9
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 3.0e-11 71.2 52 65.4
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 3.0e-11 71.2 59 54.2
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 3.9e-11 70.9 59 57.6
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 3.9e-11 70.9 59 57.6
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 5.1e-11 70.5 59 55.9
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 6.7e-11 70.1 50 64.0
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 8.8e-11 69.7 44 68.2
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 1.1e-10 69.3 51 60.8
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.1e-10 69.3 52 59.6
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 1.1e-10 69.3 38 78.9
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 2.0e-10 68.6 51 60.8
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 2.6e-10 68.2 51 60.8
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 3.7e-09 64.3 40 67.5
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 2.4e-08 61.6 59 57.6
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 2.4e-08 61.6 51 51.0
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.1e-08 60.8 39 61.5
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 2.0e-07 58.5 54 46.3


User provided reference genes

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