Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026869 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 1.4e-169 599.7 362 100.0
vmacro14674 Vaccinium macrocarpon HOM05D003822 ORTHO05D004484 1.9e-84 317.0 288 71.9
Hma1.2p1_0635F.1_g193140 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 9.3e-84 314.7 298 68.1
Hma1.2p1_2403F.1_g321420 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 3.7e-80 302.8 297 71.7
COL.COLO4_29926 Corchorus olitorius HOM05D003822 ORTHO05D004484 3.4e-78 296.2 288 69.4
Manes.13G057600 Manihot esculenta HOM05D003822 ORTHO05D004484 4.5e-78 295.8 283 72.8
TAR633G2284 Trochodendron aralioides HOM05D003822 ORTHO05D004484 8.4e-77 291.6 282 70.2
Glyma.15G027800 Glycine max HOM05D003822 ORTHO05D004484 1.1e-76 291.2 291 70.4
Gorai.007G162100 Gossypium raimondii HOM05D003822 ORTHO05D004484 1.4e-76 290.8 291 62.9
Gohir.D11G153200 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.9e-76 290.4 291 62.9
TWI36G1391 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.5e-76 288.9 279 68.8
TWI36G1709 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 5.5e-76 288.9 279 68.8
TWI18G0659 Tripterygium wilfordii HOM05D003822 ORTHO05D004484 7.1e-76 288.5 294 67.0
Thecc.01G205200 Theobroma cacao HOM05D003822 ORTHO05D004484 6.0e-75 285.4 282 70.6
Peaxi162Scf00995g00322 Petunia axillaris HOM05D003822 ORTHO05D004484 7.9e-75 285.0 286 67.8
VMungo1080G0920 Vigna mungo HOM05D003822 ORTHO05D004484 7.9e-75 285.0 289 68.9
Nn7g37555 Nelumbo nucifera HOM05D003822 ORTHO05D004484 1.0e-74 284.6 287 67.2
Gohir.A11G145000 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.3e-74 284.3 278 62.6
SGA_v2.0_scaffold77G25327 Striga asiatica HOM05D003822 ORTHO05D004484 1.3e-74 284.3 283 65.7
Cc02_g30690 Coffea canephora HOM05D003822 ORTHO05D004484 1.8e-74 283.9 287 70.4
Glyma.13G346400 Glycine max HOM05D003822 ORTHO05D004484 3.0e-74 283.1 295 68.1
Solyc06g007700.4 Solanum lycopersicum HOM05D003822 ORTHO05D004484 5.1e-74 282.3 286 71.0
Nn1g09539 Nelumbo nucifera HOM05D003822 ORTHO05D004484 8.7e-74 281.6 286 69.2
Oeu013421.2 Olea europaea HOM05D003822 ORTHO05D004484 3.3e-73 279.6 289 66.4
MSTRG.17947 Avicennia marina HOM05D003822 ORTHO05D004484 4.8e-72 275.8 283 67.8
Actinidia34522 Actinidia chinensis HOM05D003822 ORTHO05D004484 1.1e-71 274.6 284 66.9
QL10p052081 Quercus lobata HOM05D003822 ORTHO05D004484 2.4e-71 273.5 285 68.4
TAR362G1102 Trochodendron aralioides HOM05D003822 ORTHO05D004484 9.0e-71 271.6 292 63.4
Haze_01421 Corylus avellana HOM05D003822 ORTHO05D004484 1.5e-70 270.8 300 65.3
Duzib211G0255 Durio zibethinus HOM05D003822 ORTHO05D004484 1.5e-70 270.8 294 63.9
Potri.017G018400 Populus trichocarpa HOM05D003822 ORTHO05D004484 2.9e-69 266.5 294 67.7
TPR.G6564 Trifolium pratense HOM05D003822 ORTHO05D004484 2.9e-69 266.5 294 60.5
Eucgr.H00681 Eucalyptus grandis HOM05D003822 ORTHO05D004484 3.8e-69 266.2 301 64.5
Eucgr.A00039 Eucalyptus grandis HOM05D003822 ORTHO05D004484 1.1e-68 264.6 286 63.6
Nitab4.5_0002641g0020 Nicotiana tabacum HOM05D003822 ORTHO05D004484 1.1e-68 264.6 289 68.5
MBI02_g24302_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 4.2e-68 262.7 270 68.9
TAR365G1107 Trochodendron aralioides HOM05D003822 ORTHO05D004484 4.2e-68 262.7 290 63.8
Cfa015215 Carpinus fangiana HOM05D003822 ORTHO05D004484 7.1e-68 261.9 303 64.7
THA.LOC104822456 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 1.6e-67 260.8 286 64.7
Actinidia23132 Actinidia chinensis HOM05D003822 ORTHO05D004484 3.5e-67 259.6 304 56.2
Dinv28779 Davidia involucrata HOM05D003822 ORTHO05D004484 3.5e-67 259.6 286 62.9
CiPaw.01G173700 Carya illinoinensis HOM05D003822 ORTHO05D004484 1.0e-66 258.1 291 69.1
Ca_01239_v3 Cicer arietinum L. HOM05D003822 ORTHO05D004484 1.3e-66 257.7 291 64.3
Ciclev10021425m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.3e-66 257.7 288 68.4
VMungo1127G1572 Vigna mungo HOM05D003822 ORTHO05D004484 1.3e-66 257.7 284 62.0
FAN08G2486 Fragaria x ananassa HOM05D003822 ORTHO05D004484 3.9e-66 256.1 302 60.3
ECA248G1190 Erigeron canadensis HOM05D002050 ORTHO05D001949 5.1e-66 255.8 277 56.3
Glyma.11G125400 Glycine max HOM05D003822 ORTHO05D004484 5.1e-66 255.8 289 61.9
Sabra14G0133100 Salix brachista HOM05D003822 ORTHO05D004484 5.1e-66 255.8 291 62.5
Nitab4.5_0003952g0050 Nicotiana tabacum HOM05D003822 ORTHO05D004484 8.7e-66 255.0 293 61.4
Cpa.g.sc8.23 Carica papaya HOM05D003822 ORTHO05D004484 1.1e-65 254.6 282 64.5
Ciclev10016105m.g Citrus clementina HOM05D003822 ORTHO05D004484 1.9e-65 253.8 294 63.6
Duzib133G0954 Durio zibethinus HOM05D003822 ORTHO05D004484 3.3e-65 253.1 296 59.8
Lalb_Chr24g0396641 Lupinus albus HOM05D003822 ORTHO05D004484 4.3e-65 252.7 319 57.1
CiPaw.02G103400 Carya illinoinensis HOM05D003822 ORTHO05D004484 9.7e-65 251.5 299 63.2
Thhalv10021215m.g Eutrema salsugineum HOM05D003822 ORTHO05D004484 9.7e-65 251.5 298 60.7
arahy.Tifrunner.gnm1.ann1.0NAL6S Arachis hypogaea HOM05D003822 ORTHO05D004484 1.6e-64 250.8 295 65.4
Lalb_Chr22g0352031 Lupinus albus HOM05D003822 ORTHO05D004484 3.7e-64 249.6 289 60.2
Prupe.1G200400 Prunus persica HOM05D003822 ORTHO05D004484 3.7e-64 249.6 292 61.3
THA.LOC104819024 Tarenaya hassleriana HOM05D003822 ORTHO05D004484 3.7e-64 249.6 307 58.6
AL3G18900 Arabidopsis lyrata HOM05D003822 ORTHO05D004484 4.8e-64 249.2 299 58.5
Manes.12G057507 Manihot esculenta HOM05D003822 ORTHO05D004484 4.8e-64 249.2 280 68.6
Manes.12G057905 Manihot esculenta HOM05D003822 ORTHO05D004484 4.8e-64 249.2 280 68.6
Carub.0003s0711 Capsella rubella HOM05D003822 ORTHO05D004484 8.2e-64 248.4 300 62.7
Sopen06g002590 Solanum pennellii HOM05D003822 ORTHO05D004484 8.2e-64 248.4 286 66.8
arahy.Tifrunner.gnm1.ann1.1KAH27 Arachis hypogaea HOM05D003822 ORTHO05D004484 1.1e-63 248.1 295 65.1
Sp3g06480 Schrenkiella parvula HOM05D003822 ORTHO05D004484 1.4e-63 247.7 299 62.9
ECA236G4570 Erigeron canadensis HOM05D003822 ORTHO05D004484 1.8e-63 247.3 294 61.2
Manes.12G058903 Manihot esculenta HOM05D003822 ORTHO05D004484 4.1e-63 246.1 283 67.1
BraA05t22796Z Brassica rapa HOM05D003822 ORTHO05D004484 6.9e-63 245.4 315 59.4
FAN04G1289 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.6e-62 243.4 309 63.8
FAN18G3379 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.6e-62 243.4 309 63.8
A05p40650 Brassica napus HOM05D003822 ORTHO05D004484 3.4e-62 243.0 283 63.3
Peaxi162Scf00372g00722 Petunia axillaris HOM05D003822 ORTHO05D004484 3.4e-62 243.0 288 63.5
Phvul.005G155400 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.0e-61 241.5 312 57.4
Sabra17G0014400 Salix brachista HOM05D000455 ORTHO05D000434 1.3e-61 241.1 309 63.4
unitig_22.g5196 Utricularia gibba HOM05D003822 ORTHO05D004484 6.5e-61 238.8 296 57.4
RcHm_v2.0_Chr1g0340971 Rosa chinensis HOM05D003822 ORTHO05D004484 1.9e-60 237.3 295 56.9
AT3G07560 Arabidopsis thaliana HOM05D003822 ORTHO05D004484 3.2e-60 236.5 309 54.4
Duzib138G1354 Durio zibethinus HOM05D003822 ORTHO05D004484 3.2e-60 236.5 302 62.9
Sabra07G0108500 Salix brachista HOM05D003822 ORTHO05D004484 3.2e-60 236.5 290 60.3
Sabra07G0120800 Salix brachista HOM05D003822 ORTHO05D004484 3.2e-60 236.5 290 60.3
MD04G1046700 Malus domestica HOM05D003822 ORTHO05D004484 4.2e-60 236.1 294 63.3
Lsat_1_v5_gn_8_98601 Lactuca sativa HOM05D003822 ORTHO05D004484 5.5e-60 235.7 299 61.2
BcaB03g14694 Brassica carinata HOM05D003822 ORTHO05D004484 9.3e-60 235.0 302 60.9
RcHm_v2.0_Chr7g0230961 Rosa chinensis HOM05D003822 ORTHO05D004484 1.2e-59 234.6 307 59.0
FvH4_5g32960 Fragaria vesca HOM05D003822 ORTHO05D004484 4.6e-59 232.6 299 63.5
Ah.07g202460 Amaranthus hybridus HOM05D003822 ORTHO05D004484 1.0e-58 231.5 284 57.7
Medtr2g099360 Medicago truncatula HOM05D003822 ORTHO05D004484 2.3e-58 230.3 306 59.8
Sc19g0002790 Simmondsia chinensis HOM05D003822 ORTHO05D004484 3.0e-58 229.9 292 57.9
PGSC0003DMG400020658 Solanum tuberosum HOM05D003822 ORTHO05D004484 5.1e-58 229.2 293 59.4
Potri.014G197200 Populus trichocarpa HOM05D003822 ORTHO05D004484 8.8e-58 228.4 298 62.8
HanXRQChr01g0010521 Helianthus annuus HOM05D003822 ORTHO05D004484 1.5e-57 227.6 305 55.7
C05p59760 Brassica napus HOM05D003822 ORTHO05D004484 1.9e-57 227.3 296 56.4
HanXRQChr10g0281191 Helianthus annuus HOM05D003822 ORTHO05D004484 2.5e-57 226.9 288 53.8
AUR62002363 Chenopodium quinoa HOM05D003822 ORTHO05D004484 3.3e-57 226.5 310 56.5
Lj3g0026330 Lotus japonicus HOM05D003822 ORTHO05D004484 4.3e-57 226.1 306 60.8
Aa31LG5G18100 Aethionema arabicum HOM05D003822 ORTHO05D004484 1.3e-56 224.6 323 51.7
MELO3C017788.2 Cucumis melo HOM05D003822 ORTHO05D004484 1.3e-56 224.6 309 52.8
Sed0021377 Sechium edule HOM05D003822 ORTHO05D004484 1.3e-56 224.6 282 61.7
HPP92_015668 Vanilla planifolia HOM05D003822 ORTHO05D004484 2.2e-56 223.8 277 63.2
PSO017G3256 Papaver somniferum HOM05D003822 ORTHO05D004484 3.7e-56 223.0 317 58.0
Gorai.N001500 Gossypium raimondii HOM05D003822 ORTHO05D004484 8.2e-56 221.9 275 56.0
MD00G1127600 Malus domestica HOM05D003822 ORTHO05D004484 1.4e-55 221.1 279 61.3
PSO837G0022 Papaver somniferum HOM05D003822 ORTHO05D004484 1.4e-55 221.1 317 57.4
Lj3g0024368 Lotus japonicus HOM05D003822 ORTHO05D004484 1.8e-55 220.7 292 55.8
Aqoxy2G04159 Aquilegia oxysepala HOM05D003822 ORTHO05D004484 5.3e-55 219.2 284 59.9
Atru.chr6.3488 Acer truncatum HOM05D003822 ORTHO05D004484 9.1e-55 218.4 303 60.1
Sabra17G0002300 Salix brachista HOM05D000455 ORTHO05D000434 9.1e-55 218.4 356 54.2
A03p35330 Brassica napus HOM05D003822 ORTHO05D004484 5.9e-54 215.7 301 58.5
Sed0005976 Sechium edule HOM05D003822 ORTHO05D004484 7.7e-54 215.3 289 61.9
Lj2C1109G11 Lonicera japonica HOM05D003822 ORTHO05D004484 1.0e-53 214.9 278 58.3
PGR083G0513 Punica granatum HOM05D003822 ORTHO05D004484 2.2e-53 213.8 285 61.4
CAN.G181.49 Capsicum annuum HOM05D003822 ORTHO05D004484 5.0e-53 212.6 291 61.5
C03p42940 Brassica napus HOM05D003822 ORTHO05D004484 6.5e-53 212.2 303 55.1
BcaC01g04277 Brassica carinata HOM05D003822 ORTHO05D004484 2.5e-52 210.3 302 55.0
BolC5t34630H Brassica oleracea HOM05D003822 ORTHO05D004484 2.5e-52 210.3 340 50.0
CsaV3_4G002560 Cucumis sativus L. HOM05D003822 ORTHO05D004484 3.2e-52 209.9 286 61.9
EL10Ac3g06027 Beta vulgaris HOM05D003822 ORTHO05D004484 7.2e-52 208.8 286 57.7
CANSAT11G1915 Cannabis sativa HOM05D003822 ORTHO05D004484 1.6e-51 207.6 302 62.6
PGR102G0947 Punica granatum HOM05D003822 ORTHO05D004484 1.6e-51 207.6 291 56.7
CDE02G4798 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 6.1e-51 205.7 284 57.7
CSS0006211 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.3e-50 203.8 202 67.8
BolC3t16562H Brassica oleracea HOM05D003822 ORTHO05D004484 5.1e-50 202.6 303 58.4
Manes.11G127100 Manihot esculenta HOM05D003822 ORTHO05D004484 5.1e-50 202.6 257 57.2
CANSAT56G4141 Cannabis sativa HOM05D003822 ORTHO05D004484 8.8e-50 201.8 311 59.2
Os03g0786000 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.6e-49 200.3 281 56.6
CDE05G3137 Ceratophyllum demersum HOM05D003822 ORTHO05D004484 1.7e-48 197.6 286 51.7
Hund03185 Selenicereus undatus HOM05D003822 ORTHO05D004484 2.8e-48 196.8 285 52.6
SGA_v2.0_scaffold95G28678 Striga asiatica HOM05D003822 ORTHO05D004484 3.7e-48 196.4 210 65.2
ATR0752G090 Amborella trichopoda HOM05D003822 ORTHO05D004484 8.2e-48 195.3 278 58.3
Os07g0152800 Oryza sativa ssp. japonica HOM05D003822 ORTHO05D004484 2.4e-47 193.7 282 59.6
BcaC05g29550 Brassica carinata HOM05D003822 ORTHO05D004484 3.1e-47 193.4 283 54.1
Zm00001eb059960 Zea mays HOM05D003822 ORTHO05D004484 5.3e-47 192.6 283 53.7
BcaB04g21287 Brassica carinata HOM05D003822 ORTHO05D004484 1.5e-46 191.0 290 52.4
Lsat_1_v5_gn_5_175601 Lactuca sativa HOM05D003822 ORTHO05D004484 3.8e-45 186.4 278 57.2
Migut.N00690 Erythranthe guttata HOM05D003822 ORTHO05D004484 2.5e-44 183.7 295 55.6
ClCG07G011660 Citrullus lanatus HOM05D003822 ORTHO05D004484 1.6e-43 181.0 399 41.4
SEGI_01562 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.4e-42 177.9 298 50.7
Zm00001eb117520 Zea mays HOM05D003822 ORTHO05D004484 2.3e-42 177.2 286 54.5
Actinidia11655 Actinidia chinensis HOM05D003822 ORTHO05D004484 6.3e-40 169.1 207 67.1
AUR62023822 Chenopodium quinoa HOM05D003822 ORTHO05D004484 8.2e-40 168.7 275 48.0
MSTRG.12733 Avicennia marina HOM05D003822 ORTHO05D004484 2.0e-38 164.1 200 61.0
Oeu020438.1 Olea europaea HOM05D003822 ORTHO05D004484 3.5e-38 163.3 204 68.1
SEGI_07594 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 7.7e-38 162.2 307 47.6
PGSC0003DMG400020552 Solanum tuberosum HOM05D003822 ORTHO05D004484 3.8e-37 159.8 133 60.9
unitig_8.g3681 Utricularia gibba HOM05D003822 ORTHO05D004484 6.1e-35 152.5 123 76.4
BolC1t05546H Brassica oleracea HOM05D003822 ORTHO05D004484 5.2e-34 149.4 234 56.4
Phvul.011G052000 Phaseolus vulgaris HOM05D003822 ORTHO05D004484 1.2e-33 148.3 199 60.3
Psat5g291600 Pisum sativum HOM05D003822 ORTHO05D004484 3.5e-30 136.7 227 61.7
MBI18_g24478_MAGBIO Magnolia biondii HOM05D003822 ORTHO05D004484 5.9e-30 136.0 269 46.8
BraA01t04376Z Brassica rapa HOM05D003822 ORTHO05D004484 1.7e-29 134.4 131 54.2
Manes.12G058104 Manihot esculenta HOM05D003822 ORTHO05D004484 4.2e-28 129.8 81 77.8
CARHR082240 Cardamine hirsuta HOM05D003822 ORTHO05D004484 2.1e-27 127.5 199 62.8
CSS0030404 Camellia sinensis var. sinensis HOM05D003822 ORTHO05D004484 2.7e-27 127.1 77 84.4
Oeu020439.1 Olea europaea HOM05D003822 ORTHO05D004484 8.8e-26 122.1 84 73.8
FAN01G1095 Fragaria x ananassa HOM05D003822 ORTHO05D004484 2.2e-24 117.5 197 55.8
Gohir.A07G157900 Gossypium hirsutum HOM05D003822 ORTHO05D004484 1.8e-23 114.4 101 63.4
SMO146G0020 Selaginella moellendorffii HOM05D003822 ORTHO05D004484 2.7e-22 110.5 289 42.2
MSTRG.12731 Avicennia marina HOM05D003822 ORTHO05D004484 5.9e-22 109.4 82 67.1
Atru.chr4.1339 Acer truncatum HOM05D003822 ORTHO05D004484 5.5e-20 102.8 81 72.8
FAN06G0586 Fragaria x ananassa HOM05D003822 ORTHO05D004484 5.5e-20 102.8 90 64.4
Pp3c11_19790 Physcomitrium patens HOM05D003822 ORTHO05D004484 9.5e-20 102.1 311 40.8
FvH4_7g08180 Fragaria vesca HOM05D003822 ORTHO05D046505 6.1e-19 99.4 81 67.9
Hma1.2p1_0161F.1_g071790 Hydrangea macrophylla HOM05D003822 ORTHO05D004484 8.0e-19 99.0 129 48.1
AagrBONN_evm.TU.Sc2ySwM_368.3329 Anthoceros agrestis HOM05D003822 ORTHO05D004484 1.4e-18 98.2 312 41.0
FAN10G3558 Fragaria x ananassa HOM05D003822 ORTHO05D046505 2.3e-18 97.4 305 33.8
CARHR082220 Cardamine hirsuta HOM05D003822 ORTHO05D004484 3.4e-17 93.6 72 65.3
Mapoly0080s0067 Marchantia polymorpha HOM05D003822 ORTHO05D004484 7.5e-17 92.4 342 43.0
Eucgr.B03613 Eucalyptus grandis HOM05D003822 ORTHO05D004484 2.2e-16 90.9 68 69.1
CBR_g38951 Chara braunii HOM05D003822 ORTHO05D004484 4.1e-15 86.7 333 44.4
Eucgr.C02476 Eucalyptus grandis HOM05D003822 ORTHO05D004484 7.0e-15 85.9 63 71.4
FAN01G2016 Fragaria x ananassa HOM05D003822 ORTHO05D004484 1.1e-12 78.6 44 86.4
SEGI_02285 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 3.3e-12 77.0 91 50.5
SEGI_40649 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 4.7e-11 73.2 97 50.5
ATR0737G020 Amborella trichopoda HOM05D003822 ORTHO05D004484 2.2e-08 64.3 76 48.7
Thecc.04G171800 Theobroma cacao HOM05D003822 ORTHO05D004484 2.2e-08 64.3 62 51.6
MCO15G241 Micromonas commoda HOM05D003822 ORTHO05D004484 2.9e-08 63.9 62 56.5
FAN06G2565 Fragaria x ananassa HOM05D003822 ORTHO05D001690 4.9e-08 63.2 80 50.0
SEGI_24544 Sequoiadendron giganteum HOM05D003822 ORTHO05D004484 1.4e-07 61.6 97 47.4
SEGI_25865 Sequoiadendron giganteum HOM05D000010 ORTHO05D004484 6.0e-06 56.2 79 44.3


User provided reference genes

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