Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026821 Camellia sinensis var. sinensis HOM05D020435 ORTHO05D016160 2.7e-112 408.7 210 100.0
CSS0035570 Camellia sinensis var. sinensis HOM05D020435 ORTHO05D016160 2.1e-51 206.5 138 80.4
SGA_v2.0_scaffold69G23181 Striga asiatica HOM05D002399 ORTHO05D002479 3.9e-26 122.5 188 42.6
SGA_v2.0_scaffold240G44132 Striga asiatica HOM05D020435 ORTHO05D016160 6.1e-19 98.6 141 44.7
Os01g0737550 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 2.8e-16 89.7 198 35.9
Hma1.2p1_1283F.1_g272820 Hydrangea macrophylla HOM05D020435 ORTHO05D016160 5.9e-14 82.0 101 52.5
QL06p038341 Quercus lobata HOM05D000737 ORTHO05D000581 1.2e-11 74.3 82 51.2
Os04g0225067 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 2.1e-11 73.6 168 31.0
Os01g0660450 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 4.7e-11 72.4 195 33.3
SGA_v2.0_scaffold37G14599 Striga asiatica HOM05D019026 ORTHO05D016160 6.7e-10 68.6 191 34.0
Os01g0299801 Oryza sativa ssp. japonica HOM05D019026 ORTHO05D016160 1.1e-07 61.2 174 35.6
Rhsim04G0069500 Rhododendron simsii HOM05D000402 ORTHO05D000263 1.1e-07 61.2 62 62.9
SGA_v2.0_scaffold66G22304 Striga asiatica HOM05D020435 ORTHO05D016160 5.9e-06 55.5 168 33.9


User provided reference genes

Program Settings