Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026815 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 1.5e-115 419.5 200 100.0
CSS0012931 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 1.3e-100 369.8 183 95.1
CSS0037935 Camellia sinensis var. sinensis HOM05D003596 ORTHO05D004256 3.0e-100 368.6 183 94.5
vmacro17443 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.1e-100 367.9 183 93.4
vmacro22567 Vaccinium macrocarpon HOM05D003596 ORTHO05D004256 5.1e-100 367.9 183 93.4
Rhsim05G0069300 Rhododendron simsii HOM05D003596 ORTHO05D004256 1.1e-99 366.7 183 93.4
Actinidia29320 Actinidia chinensis HOM05D003596 ORTHO05D004256 3.7e-98 361.7 182 91.8
Dinv12460 Davidia involucrata HOM05D003596 ORTHO05D004256 1.1e-97 360.1 183 91.3
QL02p000417 Quercus lobata HOM05D003596 ORTHO05D004256 1.0e-95 353.6 182 89.0
CiPaw.15G034900 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.9e-95 352.1 182 90.1
Lj1g0007600 Lotus japonicus HOM05D003596 ORTHO05D004256 8.4e-95 350.5 183 88.5
Eucgr.C00673 Eucalyptus grandis HOM05D003596 ORTHO05D004256 1.1e-94 350.1 183 87.4
Gohir.D05G041700 Gossypium hirsutum HOM05D003596 ORTHO05D004256 1.1e-94 350.1 184 87.5
Gorai.009G042400 Gossypium raimondii HOM05D003596 ORTHO05D004256 1.4e-94 349.7 184 87.5
SalBow4G3232 Salvia bowleyana HOM05D003596 ORTHO05D004256 1.9e-94 349.4 183 88.0
Gohir.A05G040200 Gossypium hirsutum HOM05D003596 ORTHO05D004256 2.5e-94 349.0 184 87.0
Haze_18139 Corylus avellana HOM05D003596 ORTHO05D004256 5.5e-94 347.8 183 86.9
DCAR_003143 Daucus carota HOM05D003596 ORTHO05D004256 7.1e-94 347.4 183 85.8
arahy.Tifrunner.gnm1.ann1.YCFU7L Arachis hypogaea HOM05D003596 ORTHO05D004256 1.2e-93 346.7 183 86.9
Oeu018037.2 Olea europaea HOM05D003596 ORTHO05D004256 2.7e-93 345.5 183 83.6
Prupe.1G407700 Prunus persica HOM05D003596 ORTHO05D004256 2.7e-93 345.5 183 86.3
Cfa017996 Carpinus fangiana HOM05D003596 ORTHO05D004256 3.5e-93 345.1 183 86.9
Ca_15814_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 4.6e-93 344.7 182 87.4
Ca_15848_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 4.6e-93 344.7 182 87.4
Thecc.09G058900 Theobroma cacao HOM05D003596 ORTHO05D004256 4.6e-93 344.7 183 86.3
CAN.G143.21 Capsicum annuum HOM05D003596 ORTHO05D004256 6.0e-93 344.4 183 85.8
Migut.A00103 Erythranthe guttata HOM05D003596 ORTHO05D004256 6.0e-93 344.4 183 85.2
PSO210G4954 Papaver somniferum HOM05D003596 ORTHO05D004256 6.0e-93 344.4 183 86.3
Medtr3g104740 Medicago truncatula HOM05D003596 ORTHO05D004256 1.0e-92 343.6 183 86.3
Duzib150G0181 Durio zibethinus HOM05D003596 ORTHO05D004256 1.3e-92 343.2 183 84.7
TWI63G1485 Tripterygium wilfordii HOM05D003596 ORTHO05D004256 1.3e-92 343.2 183 85.2
PSO210G3757 Papaver somniferum HOM05D003596 ORTHO05D004256 2.3e-92 342.4 183 85.8
TPR.G3519 Trifolium pratense HOM05D003596 ORTHO05D004256 3.0e-92 342.0 182 85.7
Psat5g035520 Pisum sativum HOM05D003596 ORTHO05D004256 3.9e-92 341.7 182 85.7
Lalb_Chr08g0244911 Lupinus albus HOM05D003596 ORTHO05D004256 8.7e-92 340.5 183 85.8
Glyma.04G054100 Glycine max HOM05D003596 ORTHO05D004256 1.1e-91 340.1 183 85.8
Solyc08g062610.4 Solanum lycopersicum HOM05D003596 ORTHO05D004256 1.9e-91 339.3 183 85.8
AUR62020561 Chenopodium quinoa HOM05D003596 ORTHO05D004256 2.5e-91 339.0 183 83.6
MD15G1054300 Malus domestica HOM05D003596 ORTHO05D004256 3.3e-91 338.6 183 84.7
Manes.16G083300 Manihot esculenta HOM05D003596 ORTHO05D004256 3.3e-91 338.6 183 84.7
Sopen08g018080 Solanum pennellii HOM05D003596 ORTHO05D004256 3.3e-91 338.6 183 84.7
Sopen08g018130 Solanum pennellii HOM05D003596 ORTHO05D004256 3.3e-91 338.6 183 84.7
FvH4_2g31420 Fragaria vesca HOM05D003596 ORTHO05D004256 4.3e-91 338.2 183 85.2
TAR626G0212 Trochodendron aralioides HOM05D003596 ORTHO05D004256 4.3e-91 338.2 183 84.7
AUR62009106 Chenopodium quinoa HOM05D003596 ORTHO05D004256 7.4e-91 337.4 183 83.1
RcHm_v2.0_Chr6g0311401 Rosa chinensis HOM05D003596 ORTHO05D004256 7.4e-91 337.4 183 85.2
AUR62020565 Chenopodium quinoa HOM05D003596 ORTHO05D004256 9.7e-91 337.0 183 83.1
GSVIVG01035424001 Vitis vinifera HOM05D003596 ORTHO05D004256 9.7e-91 337.0 181 85.1
Aqoxy7G03993 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 1.3e-90 336.7 183 83.1
CANSAT21G2424 Cannabis sativa HOM05D003596 ORTHO05D004256 1.3e-90 336.7 183 83.1
HanXRQChr03g0071431 Helianthus annuus HOM05D003596 ORTHO05D004256 1.3e-90 336.7 181 84.0
Potri.018G060000 Populus trichocarpa HOM05D003596 ORTHO05D004256 1.3e-90 336.7 183 84.7
MSTRG.25976 Avicennia marina HOM05D003596 ORTHO05D004256 1.6e-90 336.3 183 84.2
FAN24G3537 Fragaria x ananassa HOM05D003596 ORTHO05D004256 1.6e-90 336.3 183 84.7
Sc06g0001060 Simmondsia chinensis HOM05D003596 ORTHO05D004256 1.6e-90 336.3 183 82.5
COL.COLO4_21105 Corchorus olitorius HOM05D003596 ORTHO05D004256 2.1e-90 335.9 183 83.6
Sed0005044 Sechium edule HOM05D003596 ORTHO05D004256 2.1e-90 335.9 183 83.6
arahy.Tifrunner.gnm1.ann1.N0QBSQ Arachis hypogaea HOM05D003596 ORTHO05D004256 2.8e-90 335.5 175 86.3
Ciclev10008761m.g Citrus clementina HOM05D003596 ORTHO05D004256 2.8e-90 335.5 182 83.5
Nn8g38751 Nelumbo nucifera HOM05D003596 ORTHO05D004256 3.7e-90 335.1 182 84.1
PGR031G3048 Punica granatum HOM05D003596 ORTHO05D004256 3.7e-90 335.1 182 82.4
Phvul.009G079900 Phaseolus vulgaris HOM05D003596 ORTHO05D004256 4.8e-90 334.7 183 83.1
SGA_v2.0_scaffold64G21855 Striga asiatica HOM05D003596 ORTHO05D004256 4.8e-90 334.7 183 83.6
VMungo1309G0065 Vigna mungo HOM05D003596 ORTHO05D004256 4.8e-90 334.7 183 83.6
Hund03308 Selenicereus undatus HOM05D003596 ORTHO05D004256 1.8e-89 332.8 182 83.0
Sabra18G0052600 Salix brachista HOM05D003596 ORTHO05D004256 3.1e-89 332.0 183 82.5
EL10Ac2g03812 Beta vulgaris HOM05D003596 ORTHO05D004256 4.1e-89 331.6 187 81.3
MELO3C016892.2 Cucumis melo HOM05D003596 ORTHO05D004256 5.3e-89 331.3 183 82.0
Lj8C494T3 Lonicera japonica HOM05D003596 ORTHO05D004256 6.9e-89 330.9 170 88.2
Lsat_1_v5_gn_7_60761 Lactuca sativa HOM05D003596 ORTHO05D004256 1.2e-88 330.1 181 82.9
FAN15G0358 Fragaria x ananassa HOM05D003596 ORTHO05D004256 1.5e-88 329.7 183 83.1
Ah.10g034070 Amaranthus hybridus HOM05D003596 ORTHO05D004256 2.0e-88 329.3 187 81.8
PSO210G3791 Papaver somniferum HOM05D003596 ORTHO05D004256 4.5e-88 328.2 183 81.4
CsaV3_4G035870 Cucumis sativus L. HOM05D003596 ORTHO05D004256 5.9e-88 327.8 183 81.4
Cpa.g.sc91.83 Carica papaya HOM05D003596 ORTHO05D004256 7.6e-88 327.4 183 80.3
Peaxi162Scf00070g00020 Petunia axillaris HOM05D003596 ORTHO05D004256 3.8e-87 325.1 177 83.6
ClCG05G018100 Citrullus lanatus HOM05D003596 ORTHO05D004256 1.4e-86 323.2 204 76.0
Glyma.06G054400 Glycine max HOM05D003596 ORTHO05D004256 1.6e-85 319.7 183 80.9
ATR0051G014 Amborella trichopoda HOM05D003596 ORTHO05D004256 6.1e-85 317.8 183 76.5
ECA240G3089 Erigeron canadensis HOM05D003596 ORTHO05D004256 6.1e-85 317.8 171 82.5
unitig_748.g7532 Utricularia gibba HOM05D003596 ORTHO05D004256 3.0e-84 315.5 181 78.5
QL02p000424 Quercus lobata HOM05D003596 ORTHO05D004256 3.9e-84 315.1 164 87.8
AL7G18450 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 8.7e-84 313.9 183 78.1
C07p59490 Brassica napus HOM05D003596 ORTHO05D004256 2.5e-83 312.4 183 76.5
CARHR241140 Cardamine hirsuta HOM05D003596 ORTHO05D004256 5.7e-83 311.2 183 77.0
A03p61780 Brassica napus HOM05D003596 ORTHO05D004256 1.3e-82 310.1 183 75.4
BraA03t15215Z Brassica rapa HOM05D003596 ORTHO05D004256 1.3e-82 310.1 183 75.4
MELO3C016893.2 Cucumis melo HOM05D003596 ORTHO05D004256 1.6e-82 309.7 184 76.6
Carub.0007s0734 Capsella rubella HOM05D003596 ORTHO05D004256 2.2e-82 309.3 181 77.3
HPP92_023980 Vanilla planifolia HOM05D003596 ORTHO05D004256 2.2e-82 309.3 182 75.3
Sp7g30860 Schrenkiella parvula HOM05D003596 ORTHO05D004256 3.7e-82 308.5 183 76.0
AT4G33110 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 4.8e-82 308.1 183 76.5
BolC7t46393H Brassica oleracea HOM05D003596 ORTHO05D004256 6.3e-82 307.8 183 74.9
Thhalv10025572m.g Eutrema salsugineum HOM05D003596 ORTHO05D004256 1.8e-81 306.2 183 74.3
Hma1.2p1_0732F.1_g210080 Hydrangea macrophylla HOM05D003596 ORTHO05D004256 1.8e-81 306.2 156 89.1
BcaC09g52112 Brassica carinata HOM05D003596 ORTHO05D004256 2.4e-81 305.8 179 76.0
HPP92_024003 Vanilla planifolia HOM05D003596 ORTHO05D004256 3.1e-81 305.4 182 74.2
A01p05090 Brassica napus HOM05D003596 ORTHO05D004256 6.9e-81 304.3 179 74.9
BraA01t00492Z Brassica rapa HOM05D003596 ORTHO05D004256 6.9e-81 304.3 179 74.9
C01p05570 Brassica napus HOM05D003596 ORTHO05D004256 1.5e-80 303.1 179 74.9
BolC1t00537H Brassica oleracea HOM05D003596 ORTHO05D004256 1.5e-80 303.1 179 74.9
BcaC09g52108 Brassica carinata HOM05D003596 ORTHO05D004256 2.0e-80 302.8 179 74.9
THA.LOC104803716 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 2.0e-80 302.8 183 75.4
CiPaw.15G035400 Carya illinoinensis HOM05D003596 ORTHO05D004256 2.6e-80 302.4 182 78.6
Atru.chr7.1921 Acer truncatum HOM05D003596 ORTHO05D004256 7.7e-80 300.8 164 81.7
Zm00001eb385240 Zea mays HOM05D003596 ORTHO05D004256 6.5e-79 297.7 182 73.6
Dinv12458 Davidia involucrata HOM05D003596 ORTHO05D004256 1.1e-78 297.0 146 92.5
AT4G33120 Arabidopsis thaliana HOM05D003596 ORTHO05D004256 1.9e-78 296.2 183 72.1
BolC7t46392H Brassica oleracea HOM05D003596 ORTHO05D004256 1.9e-78 296.2 179 73.2
Aa31sc651G10 Aethionema arabicum HOM05D003596 ORTHO05D004256 3.2e-78 295.4 177 75.1
THA.LOC104803717 Tarenaya hassleriana HOM05D003596 ORTHO05D004256 4.2e-78 295.0 183 73.2
Lj8A493G26 Lonicera japonica HOM05D003596 ORTHO05D004256 1.1e-73 280.4 192 71.9
CiPaw.15G035100 Carya illinoinensis HOM05D003596 ORTHO05D004256 1.3e-71 273.5 183 72.7
Psat5g035440 Pisum sativum HOM05D003596 ORTHO05D004256 3.2e-70 268.9 147 83.7
Psat5g131440 Pisum sativum HOM05D003596 ORTHO05D004256 3.2e-70 268.9 147 83.7
Nitab4.5_0002797g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 2.3e-68 262.7 134 88.1
AagrBONN_evm.TU.Sc2ySwM_117.2988 Anthoceros agrestis HOM05D003596 ORTHO05D004256 1.7e-66 256.5 178 62.9
HanXRQChr11g0345821 Helianthus annuus HOM05D003596 ORTHO05D004256 2.8e-66 255.8 212 58.0
Pp3c17_22760 Physcomitrium patens HOM05D003596 ORTHO05D004256 4.1e-65 251.9 179 62.0
Sopen08g018090 Solanum pennellii HOM05D003596 ORTHO05D004256 2.0e-64 249.6 183 67.8
Lj1g0006265 Lotus japonicus HOM05D003596 ORTHO05D004256 7.7e-64 247.7 184 65.8
Nitab4.5_0006016g0010 Nicotiana tabacum HOM05D003596 ORTHO05D004256 1.3e-63 246.9 183 67.2
SMO271G0076 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 1.7e-63 246.5 179 60.9
CBR_g6365 Chara braunii HOM05D003596 ORTHO05D004256 1.1e-62 243.8 178 58.4
Mapoly0103s0018 Marchantia polymorpha HOM05D003596 ORTHO05D004256 4.2e-62 241.9 179 59.8
MBI05_g40673_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.8e-60 236.5 184 57.6
MBI12_g10638_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 8.8e-60 234.2 124 84.7
ClCG05G018110 Citrullus lanatus HOM05D003596 ORTHO05D004256 2.8e-58 229.2 179 62.0
BcaNung02153 Brassica carinata HOM05D003596 ORTHO05D004256 3.7e-58 228.8 134 74.6
PSO063G3496 Papaver somniferum HOM05D003596 ORTHO05D004256 1.8e-57 226.5 186 56.5
MBI05_g40674_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.4e-57 226.1 186 56.5
SEGI_31297 Sequoiadendron giganteum HOM05D003596 ORTHO05D004256 2.9e-55 219.2 179 57.5
Aqoxy7G04015 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 4.2e-54 215.3 184 54.3
MBI07_g28657_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 2.0e-51 206.5 186 51.1
PSO832G4098 Papaver somniferum HOM05D003596 ORTHO05D004256 2.6e-51 206.1 218 47.2
PSO386G0091 Papaver somniferum HOM05D003596 ORTHO05D004256 1.7e-50 203.4 202 47.5
Cre09.g398700 Chlamydomonas reinhardtii HOM05D003596 ORTHO05D004256 1.4e-49 200.3 183 49.7
MBI05_g21322_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 3.1e-49 199.1 196 48.5
Zm00001eb382840 Zea mays HOM05D003596 ORTHO05D004256 7.0e-49 198.0 118 75.4
Zm00001eb045600 Zea mays HOM05D003596 ORTHO05D004256 1.6e-48 196.8 118 75.4
MCO13G046 Micromonas commoda HOM05D003596 ORTHO05D004256 2.0e-48 196.4 189 47.6
Zm00001eb224980 Zea mays HOM05D003596 ORTHO05D004256 2.7e-48 196.1 118 74.6
MBI05_g38197_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 1.1e-46 190.7 166 51.8
MBI11_g17711_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 7.2e-46 188.0 206 46.6
Gohir.A05G040250 Gossypium hirsutum HOM05D003596 ORTHO05D004256 3.6e-45 185.7 94 89.4
Gorai.009G042500 Gossypium raimondii HOM05D003596 ORTHO05D004256 8.0e-45 184.5 95 89.5
Aqoxy7G01445 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 1.8e-44 183.3 185 48.1
PSO063G0821 Papaver somniferum HOM05D003596 ORTHO05D004256 5.2e-44 181.8 187 48.7
PSO339G1340 Papaver somniferum HOM05D003596 ORTHO05D004256 8.9e-44 181.0 187 49.2
PSO832G4001 Papaver somniferum HOM05D003596 ORTHO05D004256 5.7e-43 178.3 185 49.2
PSO675G3982 Papaver somniferum HOM05D003596 ORTHO05D004256 1.7e-42 176.8 187 48.1
PSO675G8489 Papaver somniferum HOM05D003596 ORTHO05D004256 1.7e-42 176.8 187 48.1
PSO063G4959 Papaver somniferum HOM05D003596 ORTHO05D004256 2.2e-42 176.4 185 48.6
PSO229G0119 Papaver somniferum HOM05D003596 ORTHO05D004256 1.4e-41 173.7 187 47.6
Cfa024591 Carpinus fangiana HOM05D000084 ORTHO05D004256 2.4e-41 172.9 169 47.9
CDE02G2104 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 1.6e-40 170.2 99 75.8
PSO384G1072 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-40 169.9 185 45.9
PSO384G1609 Papaver somniferum HOM05D003596 ORTHO05D004256 2.0e-40 169.9 185 45.9
Cc08_g11040 Coffea canephora HOM05D003596 ORTHO05D004256 4.5e-40 168.7 89 85.4
PSO386G0153 Papaver somniferum HOM05D003596 ORTHO05D004256 7.8e-40 167.9 173 43.4
SMO115G0275 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 5.6e-38 161.8 188 37.2
Aa31LG7G10170 Aethionema arabicum HOM05D003596 ORTHO05D004256 1.0e-36 157.5 100 74.0
CDE02G3165 Ceratophyllum demersum HOM05D003596 ORTHO05D004256 7.5e-35 151.4 84 79.8
AL7G39850 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 4.9e-34 148.7 89 75.3
AL6G32760 Arabidopsis lyrata HOM05D003596 ORTHO05D004256 1.1e-33 147.5 89 74.2
Sopen08g018100 Solanum pennellii HOM05D000002 ORTHO05D000001 3.2e-33 146.0 85 77.6
Os06g0574100 Oryza sativa ssp. japonica HOM05D003596 ORTHO05D004256 5.4e-33 145.2 84 73.8
SMO358G0603 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 2.1e-29 133.3 179 37.4
SMO111G0057 Selaginella moellendorffii HOM05D003596 ORTHO05D004256 2.3e-28 129.8 178 36.5
Ca_15847_v3 Cicer arietinum L. HOM05D003596 ORTHO05D004256 4.4e-27 125.6 70 80.0
COL.COLO4_06847 Corchorus olitorius HOM05D003596 ORTHO05D004256 5.8e-27 125.2 118 55.9
PSO832G1397 Papaver somniferum HOM05D003596 ORTHO05D004256 1.9e-25 120.2 186 36.6
Aqoxy7G02483 Aquilegia oxysepala HOM05D003596 ORTHO05D031267 3.0e-23 112.8 97 50.5
Sopen08g018050 Solanum pennellii HOM05D000004 ORTHO05D000695 3.0e-23 112.8 74 68.9
Aa31LG7G10160 Aethionema arabicum HOM05D003596 ORTHO05D004256 3.6e-21 105.9 71 66.2
Aqoxy4G01737 Aquilegia oxysepala HOM05D003596 ORTHO05D031267 3.1e-12 76.3 62 50.0
Aqoxy7G04012 Aquilegia oxysepala HOM05D003596 ORTHO05D004256 4.1e-09 65.9 66 48.5
MBI05_g18185_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 7.1e-09 65.1 61 44.3
Ca_28724_v3 Cicer arietinum L. HOM05D001254 ORTHO05D001386 3.5e-08 62.8 169 25.4
MBI05_g33750_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D004256 4.6e-08 62.4 88 42.0
TAR626G1532 Trochodendron aralioides HOM05D003877 ORTHO05D004647 8.7e-07 58.2 37 73.0
TAR623G0149 Trochodendron aralioides HOM05D001730 ORTHO05D004519 1.1e-06 57.8 35 74.3
Atru.chr7.1894 Acer truncatum HOM05D003596 ORTHO05D004256 1.5e-06 57.4 34 79.4
FAN27G2313 Fragaria x ananassa HOM05D003596 ORTHO05D004256 2.5e-06 56.6 34 76.5
MBI05_g21326_MAGBIO Magnolia biondii HOM05D003596 ORTHO05D002168 4.3e-06 55.8 70 41.4


User provided reference genes

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