Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026798 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 6.7e-84 313.9 153 100.0
CSS0028275 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 9.1e-73 276.9 153 88.9
CSS0042389 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 9.1e-73 276.9 153 88.9
CSS0011198 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.2e-69 266.5 153 86.3
CSS0045627 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.2e-69 266.5 153 86.3
CSS0002699 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.4e-68 263.1 153 88.2
CSS0022918 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 1.3e-66 256.5 153 83.7
CSS0024020 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 5.3e-65 251.1 153 83.7
CSS0037146 Camellia sinensis var. sinensis HOM05D012492 ORTHO05D013377 5.3e-65 251.1 153 83.7
Hma1.2p1_0173F.1_g076480 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.6e-16 90.1 165 38.2
Hma1.2p1_0264F.1_g106190 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.0e-15 87.4 118 48.3
Actinidia09056 Actinidia chinensis HOM05D012492 ORTHO05D013377 6.6e-15 84.7 114 46.5
Hma1.2p1_1929F.1_g307880 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 6.6e-15 84.7 118 43.2
Actinidia02505 Actinidia chinensis HOM05D012492 ORTHO05D013377 2.5e-14 82.8 105 46.7
Hund01717 Selenicereus undatus HOM05D012356 ORTHO05D013377 1.1e-12 77.4 116 41.4
Hma1.2p1_0231F.1_g097616 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-12 77.0 125 44.0
Hma1.2p1_1838F.1_g304830 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-12 77.0 125 41.6
Hma1.2p1_1417F.1_g282210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.8e-12 76.6 125 43.2
Hma1.2p1_0231F.1_g097540 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 4.0e-12 75.5 125 44.0
Hma1.2p1_1536F.1_g289510 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.2e-12 75.1 87 48.3
Hma1.2p1_0793F.1_g218611 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-11 73.6 75 54.7
Hma1.2p1_0754F.1_g213020 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 7.6e-11 71.2 75 53.3
Hma1.2p1_2905F.1_g330090 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.8e-10 68.9 72 51.4
QL10p044694 Quercus lobata HOM05D000023 ORTHO05D000014 4.9e-10 68.6 88 50.0
arahy.Tifrunner.gnm1.ann1.JN0RSR Arachis hypogaea HOM05D000023 ORTHO05D000014 6.4e-10 68.2 88 45.5
QL01p014593 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-09 66.2 88 48.9
QL03p015897 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-09 66.2 88 48.9
QL05p035277 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-09 66.2 88 48.9
QL05p083223 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-09 66.2 88 48.9
QL10p062599 Quercus lobata HOM05D000023 ORTHO05D000014 2.4e-09 66.2 88 48.9
arahy.Tifrunner.gnm1.ann1.R0G8AX Arachis hypogaea HOM05D000023 ORTHO05D000014 1.3e-07 60.5 105 38.1
Lalb_Chr04g0255441 Lupinus albus HOM05D000023 ORTHO05D000014 5.1e-07 58.5 124 37.1
Lalb_Chr25g0282821 Lupinus albus HOM05D000023 ORTHO05D000014 6.6e-07 58.2 124 37.1
SHI31979 Sapria himalayana HOM05D022039 ORTHO05D000014 1.5e-06 57.0 87 37.9
Lalb_Chr09g0335091 Lupinus albus HOM05D012492 ORTHO05D013377 1.9e-06 56.6 44 61.4
QL10p020680 Quercus lobata HOM05D000023 ORTHO05D000014 1.9e-06 56.6 83 41.0
SHI45615 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-06 56.2 87 36.8
CARHR280650 Cardamine hirsuta HOM05D000023 ORTHO05D000014 9.6e-06 54.3 47 55.3
SHI14770 Sapria himalayana HOM05D000023 ORTHO05D000014 9.6e-06 54.3 46 56.5


User provided reference genes

Program Settings