Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0007649 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D033907 2.1e-88 328.9 163 100.0
CSS0026791 Camellia sinensis var. sinensis HOM05D000730 ORTHO05D033907 2.1e-88 328.9 163 100.0
Actinidia02031 Actinidia chinensis HOM05D000730 ORTHO05D000578 9.4e-36 154.1 169 51.5
QL12p017589 Quercus lobata HOM05D000730 ORTHO05D000578 2.1e-27 126.3 174 42.5
Haze_08931 Corylus avellana HOM05D000730 ORTHO05D000578 2.0e-25 119.8 171 43.3
GSVIVG01019827001 Vitis vinifera HOM05D000730 ORTHO05D000578 7.5e-25 117.9 162 46.3
Lj8A236G37 Lonicera japonica HOM05D000730 ORTHO05D033907 1.8e-23 113.2 148 43.9
Thecc.03G272900 Theobroma cacao HOM05D000730 ORTHO05D000578 1.8e-23 113.2 171 42.7
Prupe.5G093000 Prunus persica HOM05D000730 ORTHO05D000578 4.5e-22 108.6 171 40.9
CiPaw.11G139500 Carya illinoinensis HOM05D000730 ORTHO05D000578 2.9e-21 105.9 165 38.8
Sabra01G0081900 Salix brachista HOM05D000730 ORTHO05D000578 1.1e-20 104.0 164 42.7
DCAR_004665 Daucus carota HOM05D000730 ORTHO05D000578 1.5e-20 103.6 169 41.4
Ciclev10023740m.g Citrus clementina HOM05D000730 ORTHO05D000578 1.9e-20 103.2 159 38.4
Manes.01G065400 Manihot esculenta HOM05D000730 ORTHO05D000578 2.5e-20 102.8 164 40.9
Duzib068G0713 Durio zibethinus HOM05D000730 ORTHO05D000578 5.6e-20 101.7 169 39.6
Eucgr.E00552 Eucalyptus grandis HOM05D000730 ORTHO05D000578 5.6e-20 101.7 164 39.6
TAR375G0386 Trochodendron aralioides HOM05D000730 ORTHO05D000578 7.3e-20 101.3 176 36.4
Potri.001G108400 Populus trichocarpa HOM05D000730 ORTHO05D000578 9.5e-20 100.9 170 40.0
TWI81G0743 Tripterygium wilfordii HOM05D000730 ORTHO05D000578 2.1e-19 99.8 166 42.2
MD00G1110400 Malus domestica HOM05D000730 ORTHO05D000578 3.6e-19 99.0 171 39.2
Lsat_1_v5_gn_3_8441 Lactuca sativa HOM05D000730 ORTHO05D000578 5.8e-17 91.7 165 37.0
COL.COLO4_05255 Corchorus olitorius HOM05D000730 ORTHO05D000578 1.7e-16 90.1 171 36.3
ECA246G5324 Erigeron canadensis HOM05D000730 ORTHO05D000578 4.9e-16 88.6 170 37.1
Gohir.A03G018300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 1.4e-15 87.0 170 35.9
Gorai.003G160900 Gossypium raimondii HOM05D000730 ORTHO05D000578 2.4e-15 86.3 170 35.9
RcHm_v2.0_Chr7g0198971 Rosa chinensis HOM05D000730 ORTHO05D000578 4.1e-15 85.5 164 34.1
Gohir.D03G153300 Gossypium hirsutum HOM05D000730 ORTHO05D000578 5.4e-15 85.1 170 35.9
FvH4_5g01750 Fragaria vesca HOM05D000730 ORTHO05D000578 9.2e-15 84.3 171 35.1
MBI12_g43910_MAGBIO Magnolia biondii HOM05D000730 ORTHO05D000578 9.2e-15 84.3 157 36.9
Sc22g0000270 Simmondsia chinensis HOM05D000730 ORTHO05D000578 9.2e-15 84.3 166 34.3
FAN04G2748 Fragaria x ananassa HOM05D000730 ORTHO05D000578 1.2e-14 84.0 171 34.5
Oeu029784.2 Olea europaea HOM05D000730 ORTHO05D000578 1.2e-14 84.0 159 35.8
Nn6g34206 Nelumbo nucifera HOM05D000730 ORTHO05D000578 2.0e-14 83.2 169 36.1
FAN18G2185 Fragaria x ananassa HOM05D000730 ORTHO05D000578 2.7e-14 82.8 171 34.5
HanXRQChr06g0165441 Helianthus annuus HOM05D000730 ORTHO05D000578 1.1e-12 77.4 168 33.3
Sopen08g028840 Solanum pennellii HOM05D000730 ORTHO05D000578 1.1e-12 77.4 174 33.9
CANSAT21G0309 Cannabis sativa HOM05D000730 ORTHO05D000578 3.3e-12 75.9 169 33.1
AT4G11670 Arabidopsis thaliana HOM05D000730 ORTHO05D000578 7.3e-12 74.7 166 33.1
PGR042G2616 Punica granatum HOM05D000730 ORTHO05D000578 7.3e-12 74.7 166 33.7
Solyc08g080520.4 Solanum lycopersicum HOM05D000730 ORTHO05D000578 1.2e-11 73.9 174 33.3
THA.LOC104806377 Tarenaya hassleriana HOM05D000730 ORTHO05D000578 1.6e-11 73.6 166 34.3
Sp6g05800 Schrenkiella parvula HOM05D000730 ORTHO05D000578 2.8e-11 72.8 166 32.5
ATR0757G158 Amborella trichopoda HOM05D000730 ORTHO05D000578 6.2e-11 71.6 172 30.2
CARHR254700 Cardamine hirsuta HOM05D000730 ORTHO05D000578 8.0e-11 71.2 166 35.5
AL6G46270 Arabidopsis lyrata HOM05D000730 ORTHO05D000578 1.1e-10 70.9 166 34.3
CAN.G981.11 Capsicum annuum HOM05D000730 ORTHO05D018831 1.4e-10 70.5 163 34.4
Peaxi162Scf00714g00334 Petunia axillaris HOM05D000730 ORTHO05D000578 1.8e-10 70.1 166 33.1
C09p34790 Brassica napus HOM05D000730 ORTHO05D000578 3.1e-10 69.3 161 32.9
AUR62017277 Chenopodium quinoa HOM05D000730 ORTHO05D000578 5.2e-10 68.6 166 31.9
SalBow6G3932 Salvia bowleyana HOM05D000730 ORTHO05D000578 1.2e-09 67.4 162 34.0
MELO3C014023.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.0e-09 66.6 167 34.1
Cc08_g14160 Coffea canephora HOM05D000730 ORTHO05D000578 3.4e-09 65.9 159 35.8
A09p27470 Brassica napus HOM05D000730 ORTHO05D000578 4.4e-09 65.5 162 32.1
HPP92_007385 Vanilla planifolia HOM05D000730 ORTHO05D000578 5.8e-09 65.1 165 32.1
Nitab4.5_0003924g0080 Nicotiana tabacum HOM05D000730 ORTHO05D000578 7.5e-09 64.7 158 31.0
BraA09t38315Z Brassica rapa HOM05D000730 ORTHO05D000578 9.8e-09 64.3 163 33.1
FAN08G1404 Fragaria x ananassa HOM05D000730 ORTHO05D000578 3.7e-08 62.4 168 29.8
Atru.chr9.1560 Acer truncatum HOM05D000730 ORTHO05D000578 4.9e-08 62.0 49 63.3
ClCG00G000280 Citrullus lanatus HOM05D000730 ORTHO05D000578 1.1e-07 60.8 159 34.0
ClCG00G001770 Citrullus lanatus HOM05D000730 ORTHO05D000578 1.1e-07 60.8 159 34.0
Thhalv10028371m.g Eutrema salsugineum HOM05D000730 ORTHO05D000578 1.1e-07 60.8 152 32.9
Actinidia14533 Actinidia chinensis HOM05D000730 ORTHO05D000578 1.4e-07 60.5 79 48.1
EL10Ac5g12746 Beta vulgaris HOM05D000730 ORTHO05D000578 2.4e-07 59.7 171 26.9
BolC9t56324H Brassica oleracea HOM05D000730 ORTHO05D000578 2.4e-07 59.7 163 30.7
Migut.A00938 Erythranthe guttata HOM05D000730 ORTHO05D000578 3.2e-07 59.3 162 31.5
Sed0026891 Sechium edule HOM05D000730 ORTHO05D000578 4.1e-07 58.9 90 40.0
SGA_v2.0_scaffold343G49460 Striga asiatica HOM05D000730 ORTHO05D000578 2.1e-06 56.6 163 28.2
Aqoxy5G03962 Aquilegia oxysepala HOM05D000730 ORTHO05D000578 7.8e-06 54.7 161 27.3


User provided reference genes

Program Settings