Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 4.3e-261 904.0 435 100.0
CSS0012725 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 6.5e-209 730.7 378 95.0
CSS0019383 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 3.7e-188 661.8 384 84.9
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 2.3e-73 280.4 386 46.9
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 2.7e-37 160.6 293 36.2
Rhsim04G0208100 Rhododendron simsii HOM05D013111 ORTHO05D013046 5.3e-33 146.4 332 36.1
Cfa003917 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.0e-29 132.9 266 35.3
vmacro10470 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 8.7e-28 129.0 363 32.0
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 3.3e-27 127.1 296 31.8
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 2.1e-26 124.4 265 33.6
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 2.8e-26 124.0 245 36.3
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 3.6e-26 123.6 267 34.1
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 3.1e-25 120.6 385 30.1
CSS0005117 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 3.4e-24 117.1 245 35.1
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 5.8e-24 116.3 330 30.3
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 1.9e-22 111.3 260 32.7
Dinv33461 Davidia involucrata HOM05D010628 ORTHO05D010877 3.2e-22 110.5 272 33.5
Rhsim12G0126200 Rhododendron simsii HOM05D010628 ORTHO05D010877 4.2e-22 110.2 258 31.8
Rhsim04G0202700 Rhododendron simsii HOM05D025536 ORTHO05D010877 6.0e-21 106.3 258 33.3
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.0e-20 105.5 270 35.2
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 2.3e-20 104.4 225 32.4
Dinv25051 Davidia involucrata HOM05D011324 ORTHO05D013448 5.1e-20 103.2 249 28.5
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.1e-19 102.1 263 32.3
vmacro22846 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 1.1e-19 102.1 286 28.3
CSS0043929 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 1.5e-19 101.7 220 31.4
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.5e-19 101.7 262 30.9
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 1.9e-19 101.3 251 29.9
Rhsim04G0224100 Rhododendron simsii HOM05D013111 ORTHO05D013046 8.1e-18 95.9 190 38.4
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 8.1e-18 95.9 271 28.8
Dinv28168 Davidia involucrata HOM05D011324 ORTHO05D013448 1.4e-17 95.1 220 30.5
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.4e-17 95.1 270 27.8
vmacro20887 Vaccinium macrocarpon HOM05D013111 ORTHO05D013046 1.4e-17 95.1 235 31.5
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 1.8e-17 94.7 251 29.1
CSS0033232 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 4.0e-17 93.6 255 31.0
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 5.3e-17 93.2 225 29.8
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 6.9e-17 92.8 251 29.1
Rhsim07G0232000 Rhododendron simsii HOM05D010628 ORTHO05D010877 6.9e-17 92.8 308 31.2
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.9e-17 92.8 270 27.8
RhsimUnG0033600 Rhododendron simsii HOM05D010628 ORTHO05D010877 9.0e-17 92.4 312 30.8
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 1.5e-16 91.7 351 23.4
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.5e-16 91.7 258 28.3
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 2.6e-16 90.9 259 28.6
Hund00487 Selenicereus undatus HOM05D064078 ORTHO05D012831 2.6e-16 90.9 228 32.0
Duzib264G0155 Durio zibethinus HOM05D029922 ORTHO05D035097 3.4e-16 90.5 278 26.6
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 5.8e-16 89.7 252 31.0
Dinv35477 Davidia involucrata HOM05D013363 ORTHO05D015094 7.6e-16 89.4 273 27.1
QL11p050245 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-15 88.6 284 27.8
QL93p0284_0002 Quercus lobata HOM05D010066 ORTHO05D009743 1.3e-15 88.6 284 27.8
Duzib264G0667 Durio zibethinus HOM05D029922 ORTHO05D035097 1.7e-15 88.2 278 25.9
QL11p045102 Quercus lobata HOM05D010066 ORTHO05D009743 3.8e-15 87.0 242 29.8
Duzib264G0671 Durio zibethinus HOM05D029922 ORTHO05D035097 6.5e-15 86.3 278 25.5
RhsimUnG0033800 Rhododendron simsii HOM05D010628 ORTHO05D010877 1.1e-14 85.5 278 32.4
Dinv35632 Davidia involucrata HOM05D013363 ORTHO05D015094 5.5e-14 83.2 272 27.2
Ah.01g016270 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.2e-13 82.0 246 28.0
Ah.01g016360 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.2e-13 82.0 246 28.0
Ah.01g016440 Amaranthus hybridus HOM05D036488 ORTHO05D021181 1.2e-13 82.0 246 28.0
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.6e-13 81.6 225 28.0
Cfa003300 Carpinus fangiana HOM05D008391 ORTHO05D009743 3.5e-13 80.5 280 28.2
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 4.6e-13 80.1 178 30.3
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 6.0e-13 79.7 222 27.0
Rhsim12G0158900 Rhododendron simsii HOM05D000374 ORTHO05D000238 2.3e-12 77.8 274 29.6
RhsimUnG0035000 Rhododendron simsii HOM05D010628 ORTHO05D010877 3.0e-12 77.4 308 28.9
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 5.1e-12 76.6 232 30.2
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 6.7e-12 76.3 167 30.5
QL05p039032 Quercus lobata HOM05D048765 ORTHO05D009743 2.5e-11 74.3 208 32.2
Rhsim10G0137100 Rhododendron simsii HOM05D000374 ORTHO05D013046 3.3e-11 73.9 343 25.1
Rhsim03G0231000 Rhododendron simsii HOM05D018081 ORTHO05D026100 4.3e-11 73.6 213 29.1
Dinv35654 Davidia involucrata HOM05D013363 ORTHO05D015094 1.6e-10 71.6 258 26.0
Dinv35658 Davidia involucrata HOM05D013363 ORTHO05D015094 3.7e-10 70.5 262 25.6
Rhsim03G0039300 Rhododendron simsii HOM05D018081 ORTHO05D010877 4.8e-10 70.1 258 27.1
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 6.3e-10 69.7 271 26.9
Rhsim05G0135400 Rhododendron simsii HOM05D013111 ORTHO05D013046 1.1e-09 68.9 358 23.5
COL.COLO4_31618 Corchorus olitorius HOM05D044258 ORTHO05D044749 1.4e-09 68.6 260 26.9
QL11p055815 Quercus lobata HOM05D025344 ORTHO05D021181 1.4e-09 68.6 296 25.3
Haze_19844 Corylus avellana HOM05D027064 ORTHO05D009743 2.4e-09 67.8 323 25.7
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-09 67.8 125 30.4
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.1e-09 67.4 202 31.7
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 4.1e-09 67.0 289 24.9
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 5.3e-09 66.6 251 27.1
COL.COLO4_09850 Corchorus olitorius HOM05D014846 ORTHO05D016249 6.9e-09 66.2 315 25.7
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 9.0e-09 65.9 200 26.5
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 1.2e-08 65.5 242 28.5
COL.COLO4_24092 Corchorus olitorius HOM05D014846 ORTHO05D016249 1.5e-08 65.1 262 27.9
Rhsim03G0101600 Rhododendron simsii HOM05D001433 ORTHO05D021416 2.0e-08 64.7 195 28.7
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 2.6e-08 64.3 199 30.2
COL.COLO4_09561 Corchorus olitorius HOM05D014846 ORTHO05D016249 3.4e-08 63.9 246 30.5
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 4.5e-08 63.5 70 41.4
Aqoxy2G03550 Aquilegia oxysepala HOM05D013671 ORTHO05D010877 5.9e-08 63.2 106 34.9
COL.COLO4_09593 Corchorus olitorius HOM05D014846 ORTHO05D016249 5.9e-08 63.2 210 26.7
EL10Ac6g13766 Beta vulgaris HOM05D000034 ORTHO05D000037 7.6e-08 62.8 205 30.7
Lj3P635T20 Lonicera japonica HOM05D053282 ORTHO05D010877 7.6e-08 62.8 321 25.2
Thhalv10025393m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.0e-07 62.4 254 26.0
SGA_v2.0_scaffold130G34356 Striga asiatica HOM05D017380 ORTHO05D019049 1.3e-07 62.0 111 36.9
CSS0041687 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 3.8e-07 60.5 251 26.3
COL.COLO4_31297 Corchorus olitorius HOM05D017380 ORTHO05D019049 1.1e-06 58.9 106 34.9
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 1.1e-06 58.9 85 38.8
QL11p043786 Quercus lobata HOM05D048765 ORTHO05D009743 3.2e-06 57.4 112 34.8
QL11p018809 Quercus lobata HOM05D041046 ORTHO05D021181 4.2e-06 57.0 203 27.6
COL.COLO4_30776 Corchorus olitorius HOM05D014846 ORTHO05D016249 7.2e-06 56.2 125 31.2


User provided reference genes

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