Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0026769 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 2.0e-70 268.9 123 100.0
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 7.3e-57 223.8 120 85.8
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 2.8e-56 221.9 119 84.9
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 3.6e-56 221.5 119 84.0
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 6.2e-56 220.7 120 83.3
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 6.2e-56 220.7 119 84.0
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 1.8e-55 219.2 120 84.2
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 3.1e-55 218.4 119 83.2
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 3.1e-55 218.4 119 83.2
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 5.2e-55 217.6 120 83.3
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 5.2e-55 217.6 120 83.3
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 6.9e-55 217.2 119 83.2
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 6.9e-55 217.2 119 81.5
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 9.0e-55 216.9 119 82.4
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 9.0e-55 216.9 120 82.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 1.2e-54 216.5 119 83.2
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 2.0e-54 215.7 118 84.7
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 2.0e-54 215.7 119 80.7
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.6e-54 215.3 120 80.8
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 2.6e-54 215.3 119 82.4
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 2.6e-54 215.3 119 82.4
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 4.4e-54 214.5 119 83.2
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 5.8e-54 214.2 119 81.5
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 7.6e-54 213.8 119 81.5
Lj3C1G0 Lonicera japonica HOM05D006266 ORTHO05D008016 7.6e-54 213.8 120 82.5
Lj3C32G4 Lonicera japonica HOM05D006266 ORTHO05D008016 7.6e-54 213.8 120 82.5
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 7.6e-54 213.8 119 80.7
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 9.9e-54 213.4 119 83.2
Ah.07g202340 Amaranthus hybridus HOM05D006266 ORTHO05D008016 1.3e-53 213.0 119 80.7
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.3e-53 213.0 119 83.2
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 1.3e-53 213.0 119 81.5
Eucgr.L02537 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.7e-53 212.6 119 79.0
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 2.2e-53 212.2 119 79.0
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 2.2e-53 212.2 119 80.7
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 2.2e-53 212.2 117 82.1
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 4.9e-53 211.1 119 78.2
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 4.9e-53 211.1 119 80.7
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 6.4e-53 210.7 120 80.0
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 8.4e-53 210.3 120 79.2
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.1e-52 209.9 119 78.2
Cc03_g11970 Coffea canephora HOM05D006266 ORTHO05D008016 1.1e-52 209.9 120 80.8
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 1.1e-52 209.9 119 79.0
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 1.4e-52 209.5 119 80.7
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 1.4e-52 209.5 120 79.2
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 1.4e-52 209.5 119 79.8
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 1.9e-52 209.1 119 79.8
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 2.4e-52 208.8 119 80.7
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 2.4e-52 208.8 120 78.3
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 3.2e-52 208.4 119 79.8
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 4.2e-52 208.0 119 80.7
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 5.4e-52 207.6 119 78.2
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 9.3e-52 206.8 119 79.0
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 9.3e-52 206.8 120 77.5
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 9.3e-52 206.8 119 78.2
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 9.3e-52 206.8 119 77.3
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 1.6e-51 206.1 118 78.8
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 1.6e-51 206.1 119 78.2
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 2.1e-51 205.7 119 76.5
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 3.5e-51 204.9 119 76.5
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 3.5e-51 204.9 120 76.7
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 7.8e-51 203.8 119 77.3
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 1.7e-50 202.6 119 76.5
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 1.7e-50 202.6 119 77.3
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 1.7e-50 202.6 119 78.2
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.7e-50 202.6 119 74.8
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 3.0e-50 201.8 119 76.5
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 3.0e-50 201.8 119 76.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 6.6e-50 200.7 119 75.6
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 6.6e-50 200.7 119 75.6
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 6.6e-50 200.7 119 76.5
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 8.7e-50 200.3 119 76.5
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 8.7e-50 200.3 119 75.6
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 8.7e-50 200.3 119 75.6
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 8.7e-50 200.3 116 77.6
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 1.1e-49 199.9 119 76.5
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 1.1e-49 199.9 120 74.2
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 1.9e-49 199.1 119 76.5
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 1.9e-49 199.1 119 74.8
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 1.9e-49 199.1 116 75.9
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 2.5e-49 198.7 119 74.8
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 4.3e-49 198.0 119 76.5
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 9.6e-49 196.8 120 75.0
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 9.6e-49 196.8 119 74.8
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 1.6e-48 196.1 120 74.2
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 2.8e-48 195.3 157 62.4
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 6.2e-48 194.1 120 72.5
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 1.1e-47 193.4 119 73.1
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 1.1e-47 193.4 118 72.0
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 1.7e-45 186.0 119 72.3
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 3.3e-41 171.8 98 80.6
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 8.1e-40 167.2 112 68.8
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 3.1e-39 165.2 115 65.2
PGSC0003DMG400014944 Solanum tuberosum HOM05D006266 ORTHO05D008016 3.5e-35 151.8 92 75.0
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 1.9e-33 146.0 112 57.1
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 3.7e-32 141.7 91 71.4
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 1.9e-28 129.4 117 51.3
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.2e-27 126.7 126 53.2
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.6e-27 126.3 119 53.8
SEGI_08796 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 1.0e-26 123.6 82 68.3
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.5e-25 119.8 65 81.5
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 8.2e-24 114.0 71 70.4
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 8.5e-21 104.0 97 51.5


User provided reference genes

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